>SYV_PYRAE (Q8ZVG2) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)|
           (ValRS)
          Length = 799

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 453 WRLARFIAPRPRPTQTPRIGVLAPIDRSI 539
           W ++RF+   P P Q P+   LAP+DR++
Sbjct: 588 WNISRFVLSFPEPQQKPQ---LAPVDRAL 613

>SYIC_SCHPO (O13651) Isoleucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.5)|
           (Isoleucine--tRNA ligase) (IleRS)
          Length = 1064

 Score = 30.0 bits (66), Expect = 4.5
 Identities = 17/55 (30%), Positives = 22/55 (40%)
 Frame = +1

Query: 223 DTHTHMLAHNRPPDDAMRRTL*SILAHVMSCW*EPGDPRYHRRHLPIFAVVVIKH 387
           D H   + H   P    + TL  + + V  CW E G   Y  RH P   +   KH
Sbjct: 494 DIHRDSIDHITIPSKKGKGTLHRV-SEVFDCWFESGSMPYASRHYPFERIEEFKH 547

>RPA1_RAT (O54889) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)|
           (RNA polymerase I 194 kDa subunit) (RPA194)
          Length = 1716

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 12/17 (70%), Positives = 14/17 (82%)
 Frame = -3

Query: 291 ASKRSPHCIIGRAVVRK 241
           A+KR PHC  GR+VVRK
Sbjct: 201 AAKRCPHCKTGRSVVRK 217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,953,966
Number of Sequences: 219361
Number of extensions: 1613732
Number of successful extensions: 4442
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4308
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4429
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4488201198
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)