Clone Name | rbart33a12 |
---|---|
Clone Library Name | barley_pub |
>gb|AC037426.12| Oryza sativa chromosome 10 BAC OSJNBb0014I11 genomic sequence, complete sequence Length = 135510 Score = 159 bits (80), Expect = 7e-36 Identities = 101/108 (93%) Strand = Plus / Plus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 66828 gcacatgaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggat 66887 Query: 305 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgca 352 ||||||||||| || |||||| ||||||| |||||||||||| ||||| Sbjct: 66888 ggggaggttgaggttgatgcccagcacgttggccttgatggccgtgca 66935
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 159 bits (80), Expect = 7e-36 Identities = 101/108 (93%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 21267531 gcacatgaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggat 21267472 Query: 305 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgca 352 ||||||||||| || |||||| ||||||| |||||||||||| ||||| Sbjct: 21267471 ggggaggttgaggttgatgcccagcacgttggccttgatggccgtgca 21267424 Score = 99.6 bits (50), Expect = 6e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| |||||||||||||| | |||||| ||||||| |||||| Sbjct: 21178181 gttgaggatgaggctgaggtcgatggggaggttgagcttgatgcccagcacgttggcctt 21178240 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 21178241 gatggcggtgcaga 21178254 Score = 91.7 bits (46), Expect = 1e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| |||||||| ||||| || || ||| ||||||| |||||| Sbjct: 21171467 gttgaggatgaggctgaggtcgatggggatgttgaggttgaggccgagcacgttggcctt 21171526 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 21171527 gatggcggtgcaga 21171540 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| || |||||||| || | |||||| ||||||| |||||| Sbjct: 21174913 gttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccgagcacgttggcctt 21174972 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 21174973 gacggcggtgcaga 21174986 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || ||||||||||| || |||||| ||||| | |||||| Sbjct: 21148328 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 21148387 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 21148388 gacggcggtgcaga 21148401 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || |||||| || | || |||||| ||||||| |||||| Sbjct: 21151621 gttgaggatgaggctcagatcgacggggagattcaggttgatgcccagcacgttggcctt 21151680 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 21151681 gacggcggtgcaga 21151694 Score = 54.0 bits (27), Expect = 3e-04 Identities = 65/77 (84%), Gaps = 3/77 (3%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatg---cctagcacgtcggc 337 |||||||||||||||||| | || ||||| ||||| || |||| || || |||| ||| Sbjct: 21143579 gttgaggatgaggctgagatcgacggggatgttgaggttgatgatcccaagaacgttggc 21143638 Query: 338 cttgatggcggtgcaga 354 ||||||||||||||||| Sbjct: 21143639 cttgatggcggtgcaga 21143655 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || || |||||||| | ||||| ||||||| |||||| Sbjct: 21155736 gttgaggatgaggcttagatcgacggcgaggttgagtttcatgccgagcacgttggcctt 21155795 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 21155796 gacggcggtgcaga 21155809 Score = 44.1 bits (22), Expect = 0.30 Identities = 61/74 (82%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 21139212 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 21139271 Query: 341 gatggcggtgcaga 354 | ||||||||||| Sbjct: 21139272 cacggcggtgcaga 21139285
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 159 bits (80), Expect = 7e-36 Identities = 101/108 (93%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 21278795 gcacatgaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggat 21278736 Query: 305 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgca 352 ||||||||||| || |||||| ||||||| |||||||||||| ||||| Sbjct: 21278735 ggggaggttgaggttgatgcccagcacgttggccttgatggccgtgca 21278688 Score = 99.6 bits (50), Expect = 6e-18 Identities = 68/74 (91%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| |||||||||||||| | |||||| ||||||| |||||| Sbjct: 21189445 gttgaggatgaggctgaggtcgatggggaggttgagcttgatgcccagcacgttggcctt 21189504 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 21189505 gatggcggtgcaga 21189518 Score = 91.7 bits (46), Expect = 1e-15 Identities = 67/74 (90%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| |||||||| ||||| || || ||| ||||||| |||||| Sbjct: 21182731 gttgaggatgaggctgaggtcgatggggatgttgaggttgaggccgagcacgttggcctt 21182790 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 21182791 gatggcggtgcaga 21182804 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| || |||||||| || | |||||| ||||||| |||||| Sbjct: 21186177 gttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccgagcacgttggcctt 21186236 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 21186237 gacggcggtgcaga 21186250 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || ||||||||||| || |||||| ||||| | |||||| Sbjct: 21159592 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 21159651 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 21159652 gacggcggtgcaga 21159665 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || |||||| || | || |||||| ||||||| |||||| Sbjct: 21162885 gttgaggatgaggctcagatcgacggggagattcaggttgatgcccagcacgttggcctt 21162944 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 21162945 gacggcggtgcaga 21162958 Score = 54.0 bits (27), Expect = 3e-04 Identities = 65/77 (84%), Gaps = 3/77 (3%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatg---cctagcacgtcggc 337 |||||||||||||||||| | || ||||| ||||| || |||| || || |||| ||| Sbjct: 21154843 gttgaggatgaggctgagatcgacggggatgttgaggttgatgatcccaagaacgttggc 21154902 Query: 338 cttgatggcggtgcaga 354 ||||||||||||||||| Sbjct: 21154903 cttgatggcggtgcaga 21154919 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || || |||||||| | ||||| ||||||| |||||| Sbjct: 21167000 gttgaggatgaggcttagatcgacggcgaggttgagtttcatgccgagcacgttggcctt 21167059 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 21167060 gacggcggtgcaga 21167073 Score = 44.1 bits (22), Expect = 0.30 Identities = 61/74 (82%) Strand = Plus / Plus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 21150476 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 21150535 Query: 341 gatggcggtgcaga 354 | ||||||||||| Sbjct: 21150536 cacggcggtgcaga 21150549
>dbj|AK063684.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-119-E11, full insert sequence Length = 800 Score = 137 bits (69), Expect = 3e-29 Identities = 84/89 (94%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 474 gcacatgaagccggtggggacgcccttgccgcagaagttgaggatgaggctgaggtggat 415 Query: 305 ggggaggttgatgtggatgcctagcacgt 333 ||||||||||| || |||||| ||||||| Sbjct: 414 ggggaggttgaggttgatgcccagcacgt 386
>ref|NM_197681.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.6), mRNA Length = 399 Score = 99.6 bits (50), Expect = 6e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| |||||||||||||| | |||||| ||||||| |||||| Sbjct: 354 gttgaggatgaggctgaggtcgatggggaggttgagcttgatgcccagcacgttggcctt 295 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 294 gatggcggtgcaga 281
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete sequence Length = 144798 Score = 99.6 bits (50), Expect = 6e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| |||||||||||||| | |||||| ||||||| |||||| Sbjct: 27525 gttgaggatgaggctgaggtcgatggggaggttgagcttgatgcccagcacgttggcctt 27466 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 27465 gatggcggtgcaga 27452 Score = 91.7 bits (46), Expect = 1e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| |||||||| ||||| || || ||| ||||||| |||||| Sbjct: 34239 gttgaggatgaggctgaggtcgatggggatgttgaggttgaggccgagcacgttggcctt 34180 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 34179 gatggcggtgcaga 34166 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| || |||||||| || | |||||| ||||||| |||||| Sbjct: 30793 gttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccgagcacgttggcctt 30734 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 30733 gacggcggtgcaga 30720 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || ||||||||||| || |||||| ||||| | |||||| Sbjct: 57378 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 57319 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 57318 gacggcggtgcaga 57305 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || |||||| || | || |||||| ||||||| |||||| Sbjct: 54085 gttgaggatgaggctcagatcgacggggagattcaggttgatgcccagcacgttggcctt 54026 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 54025 gacggcggtgcaga 54012 Score = 54.0 bits (27), Expect = 3e-04 Identities = 65/77 (84%), Gaps = 3/77 (3%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatg---cctagcacgtcggc 337 |||||||||||||||||| | || ||||| ||||| || |||| || || |||| ||| Sbjct: 62127 gttgaggatgaggctgagatcgacggggatgttgaggttgatgatcccaagaacgttggc 62068 Query: 338 cttgatggcggtgcaga 354 ||||||||||||||||| Sbjct: 62067 cttgatggcggtgcaga 62051 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || || |||||||| | ||||| ||||||| |||||| Sbjct: 49970 gttgaggatgaggcttagatcgacggcgaggttgagtttcatgccgagcacgttggcctt 49911 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 49910 gacggcggtgcaga 49897 Score = 44.1 bits (22), Expect = 0.30 Identities = 61/74 (82%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 66494 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 66435 Query: 341 gatggcggtgcaga 354 | ||||||||||| Sbjct: 66434 cacggcggtgcaga 66421
>dbj|AK062381.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-B09, full insert sequence Length = 702 Score = 99.6 bits (50), Expect = 6e-18 Identities = 68/74 (91%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| |||||||||||||| | |||||| ||||||| |||||| Sbjct: 423 gttgaggatgaggctgaggtcgatggggaggttgagcttgatgcccagcacgttggcctt 364 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 363 gatggcggtgcaga 350
>ref|NM_197679.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.8), mRNA Length = 402 Score = 91.7 bits (46), Expect = 1e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| |||||||| ||||| || || ||| ||||||| |||||| Sbjct: 360 gttgaggatgaggctgaggtcgatggggatgttgaggttgaggccgagcacgttggcctt 301 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 300 gatggcggtgcaga 287
>dbj|AK062911.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-G07, full insert sequence Length = 757 Score = 91.7 bits (46), Expect = 1e-15 Identities = 67/74 (90%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| |||||||| ||||| || || ||| ||||||| |||||| Sbjct: 447 gttgaggatgaggctgaggtcgatggggatgttgaggttgaggccgagcacgttggcctt 388 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 387 gatggcggtgcaga 374
>ref|XM_467170.1| Oryza sativa (japonica cultivar-group), mRNA Length = 833 Score = 85.7 bits (43), Expect = 9e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 |||| |||||||||| |||||| ||||||||| ||||||||||||||||||||| ||| Sbjct: 498 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 439 Query: 305 ggggaggttga 315 ||||||||||| Sbjct: 438 ggggaggttga 428
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 85.7 bits (43), Expect = 9e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 |||| |||||||||| |||||| ||||||||| ||||||||||||||||||||| ||| Sbjct: 26823978 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 26823919 Query: 305 ggggaggttga 315 ||||||||||| Sbjct: 26823918 ggggaggttga 26823908 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 269 cttgccgcaaaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 328 ||||||||| |||||| || ||||||||| | || ||||| || || | |||||| || Sbjct: 26833569 cttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccgag 26833510 Query: 329 cacgtcggccttgatggcggtgcaga 354 ||||| |||||||||||||||||||| Sbjct: 26833509 cacgttggccttgatggcggtgcaga 26833484 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcatccccttttctttgtgggagat 205 |||||||||||||||||| |||||| Sbjct: 16736465 gcatccccttttctttgtaggagat 16736489 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tcatgcatgcatgcatggac 170 |||||||||||||||||||| Sbjct: 29027135 tcatgcatgcatgcatggac 29027154
>dbj|AP004037.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1001_D02 Length = 129081 Score = 85.7 bits (43), Expect = 9e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 |||| |||||||||| |||||| ||||||||| ||||||||||||||||||||| ||| Sbjct: 2521 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 2462 Query: 305 ggggaggttga 315 ||||||||||| Sbjct: 2461 ggggaggttga 2451 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 269 cttgccgcaaaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 328 ||||||||| |||||| || ||||||||| | || ||||| || || | |||||| || Sbjct: 12112 cttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccgag 12053 Query: 329 cacgtcggccttgatggcggtgcaga 354 ||||| |||||||||||||||||||| Sbjct: 12052 cacgttggccttgatggcggtgcaga 12027
>dbj|AP004883.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0516F12 Length = 146364 Score = 85.7 bits (43), Expect = 9e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 |||| |||||||||| |||||| ||||||||| ||||||||||||||||||||| ||| Sbjct: 90031 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 89972 Query: 305 ggggaggttga 315 ||||||||||| Sbjct: 89971 ggggaggttga 89961 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 269 cttgccgcaaaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 328 ||||||||| |||||| || ||||||||| | || ||||| || || | |||||| || Sbjct: 99622 cttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccgag 99563 Query: 329 cacgtcggccttgatggcggtgcaga 354 ||||| |||||||||||||||||||| Sbjct: 99562 cacgttggccttgatggcggtgcaga 99537
>dbj|AK109149.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-155-F07, full insert sequence Length = 833 Score = 85.7 bits (43), Expect = 9e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 |||| |||||||||| |||||| ||||||||| ||||||||||||||||||||| ||| Sbjct: 498 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 439 Query: 305 ggggaggttga 315 ||||||||||| Sbjct: 438 ggggaggttga 428
>gb|L27208.1|RICRCC3 Oryza sativa root-specific RCc3 mRNA, complete cds Length = 715 Score = 85.7 bits (43), Expect = 9e-14 Identities = 64/71 (90%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 |||| |||||||||| |||||| ||||||||| ||||||||||||||||||||| ||| Sbjct: 423 gcacttgaagccggtggggacggtcttgccgcagtagttgaggatgaggctgaggtcgat 364 Query: 305 ggggaggttga 315 ||||||||||| Sbjct: 363 ggggaggttga 353
>ref|XM_473449.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 396 Score = 83.8 bits (42), Expect = 3e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 |||| |||||||||| || |||| ||||||||| ||||||||||||||||||||| || Sbjct: 390 gcacttgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgac 331 Query: 305 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 ||||||||| | || |||||| || | || | |||||||||| ||||||| Sbjct: 330 ggggaggttaaggttgatgccgagaatgttgcccttgatggccgtgcaga 281
>emb|AL606633.3|OSJN00060 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0010H02, complete sequence Length = 173522 Score = 83.8 bits (42), Expect = 3e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 |||| |||||||||| || |||| ||||||||| ||||||||||||||||||||| || Sbjct: 147637 gcacttgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgac 147578 Query: 305 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 ||||||||| | || |||||| || | || | |||||||||| ||||||| Sbjct: 147577 ggggaggttaaggttgatgccgagaatgttgcccttgatggccgtgcaga 147528 Score = 79.8 bits (40), Expect = 5e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 250 tgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggatgggga 309 |||||||||| || |||| ||||||||| ||||||||||||||||||||| || ||||| Sbjct: 144432 tgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacgggga 144373 Query: 310 ggttgatgtggatgcc 325 |||||| || |||||| Sbjct: 144372 ggttgaggttgatgcc 144357 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 327 agcacgtcggccttgatggcggtgcaga 354 ||||||| |||||||||||| ||||||| Sbjct: 157687 agcacgttggccttgatggccgtgcaga 157660
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 83.8 bits (42), Expect = 3e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 245 gcacatgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggat 304 |||| |||||||||| || |||| ||||||||| ||||||||||||||||||||| || Sbjct: 27717011 gcacttgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgac 27716952 Query: 305 ggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 ||||||||| | || |||||| || | || | |||||||||| ||||||| Sbjct: 27716951 ggggaggttaaggttgatgccgagaatgttgcccttgatggccgtgcaga 27716902 Score = 79.8 bits (40), Expect = 5e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 250 tgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggatgggga 309 |||||||||| || |||| ||||||||| ||||||||||||||||||||| || ||||| Sbjct: 27713806 tgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacgggga 27713747 Query: 310 ggttgatgtggatgcc 325 |||||| || |||||| Sbjct: 27713746 ggttgaggttgatgcc 27713731 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 302 gatggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 |||||||| || |||| |||| | ||||| | |||||||||||||||||||| Sbjct: 32827196 gatggggatgtagatgctgatgtcgagcaccttggccttgatggcggtgcaga 32827248 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 31096016 ggccttgatggcggtgcaga 31095997 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 31085597 ggccttgatggcggtgcaga 31085578 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 327 agcacgtcggccttgatggcggtgcaga 354 ||||||| |||||||||||| ||||||| Sbjct: 27727061 agcacgttggccttgatggccgtgcaga 27727034
>ref|XM_473448.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 393 Score = 79.8 bits (40), Expect = 5e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 250 tgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggatgggga 309 |||||||||| || |||| ||||||||| ||||||||||||||||||||| || ||||| Sbjct: 385 tgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacgggga 326 Query: 310 ggttgatgtggatgcc 325 |||||| || |||||| Sbjct: 325 ggttgaggttgatgcc 310
>gb|AY466109.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP2) mRNA, complete cds Length = 758 Score = 79.8 bits (40), Expect = 5e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 250 tgaagccggtcgggacgcccttgccgcaaaagttgaggatgaggctgaggtggatgggga 309 |||||||||| || |||| ||||||||| ||||||||||||||||||||| || ||||| Sbjct: 460 tgaagccggtgggcacgcgcttgccgcagtagttgaggatgaggctgaggtcgacgggga 401 Query: 310 ggttgatgtggatgcc 325 |||||| || |||||| Sbjct: 400 ggttgaggttgatgcc 385
>ref|NM_197680.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.7), mRNA Length = 375 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| || |||||||| || | |||||| ||||||| |||||| Sbjct: 330 gttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccgagcacgttggcctt 271 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 270 gacggcggtgcaga 257
>dbj|AK063090.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-111-A12, full insert sequence Length = 627 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| || |||||||| || | |||||| ||||||| |||||| Sbjct: 415 gttgaggatgaggctgaggtcgacggggaggtcgagcttgatgccgagcacgttggcctt 356 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 355 gacggcggtgcaga 342
>gb|AY108363.1| Zea mays PCO069442 mRNA sequence Length = 837 Score = 75.8 bits (38), Expect = 9e-11 Identities = 65/74 (87%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| |||||||||||| | || |||||| || | || |||||| Sbjct: 427 gttgaggatgaggctgaggtcgatggggaggttaaggttgatgccgaggatgttggcctt 368 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 367 gacggcggtgcaga 354
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 69.9 bits (35), Expect = 5e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 280 agttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcct 339 ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| ||||| Sbjct: 189903 agttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgttggcct 189844 Query: 340 tgatggcggtgcaga 354 ||||||||||||||| Sbjct: 189843 tgatggcggtgcaga 189829 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 280 agttgaggatgaggctgaggtggatggggaggttgatgtggatgcc 325 |||||| || ||||||||||| |||||||||||||| || |||||| Sbjct: 198924 agttgacgaggaggctgaggttgatggggaggttgaggttgatgcc 198879 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 187144 ggccttgatggcggtgcaga 187125
>gb|AC118673.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0080O10, from chromosome 3, complete sequence Length = 127917 Score = 69.9 bits (35), Expect = 5e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 280 agttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcct 339 ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| ||||| Sbjct: 26970 agttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgttggcct 26911 Query: 340 tgatggcggtgcaga 354 ||||||||||||||| Sbjct: 26910 tgatggcggtgcaga 26896 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 280 agttgaggatgaggctgaggtggatggggaggttgatgtggatgcc 325 |||||| || ||||||||||| |||||||||||||| || |||||| Sbjct: 35991 agttgacgaggaggctgaggttgatggggaggttgaggttgatgcc 35946 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 24211 ggccttgatggcggtgcaga 24192
>gb|AC125411.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAb0079B22, from chromosome 3, complete sequence Length = 156933 Score = 69.9 bits (35), Expect = 5e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 280 agttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcct 339 ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| ||||| Sbjct: 123903 agttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgttggcct 123844 Query: 340 tgatggcggtgcaga 354 ||||||||||||||| Sbjct: 123843 tgatggcggtgcaga 123829 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 280 agttgaggatgaggctgaggtggatggggaggttgatgtggatgcc 325 |||||| || ||||||||||| |||||||||||||| || |||||| Sbjct: 132924 agttgacgaggaggctgaggttgatggggaggttgaggttgatgcc 132879 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 121144 ggccttgatggcggtgcaga 121125
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 69.9 bits (35), Expect = 5e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 280 agttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcct 339 ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| ||||| Sbjct: 189903 agttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgttggcct 189844 Query: 340 tgatggcggtgcaga 354 ||||||||||||||| Sbjct: 189843 tgatggcggtgcaga 189829 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Minus Query: 280 agttgaggatgaggctgaggtggatggggaggttgatgtggatgcc 325 |||||| || ||||||||||| |||||||||||||| || |||||| Sbjct: 198924 agttgacgaggaggctgaggttgatggggaggttgaggttgatgcc 198879 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 187144 ggccttgatggcggtgcaga 187125
>gb|AF485811.1| Oryza sativa BAC OSJNa0049F05, complete sequence Length = 162241 Score = 69.9 bits (35), Expect = 5e-09 Identities = 65/75 (86%) Strand = Plus / Plus Query: 280 agttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcct 339 ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| ||||| Sbjct: 72751 agttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgttggcct 72810 Query: 340 tgatggcggtgcaga 354 ||||||||||||||| Sbjct: 72811 tgatggcggtgcaga 72825 Score = 52.0 bits (26), Expect = 0.001 Identities = 41/46 (89%) Strand = Plus / Plus Query: 280 agttgaggatgaggctgaggtggatggggaggttgatgtggatgcc 325 |||||| || ||||||||||| |||||||||||||| || |||||| Sbjct: 63732 agttgacgaggaggctgaggttgatggggaggttgaggttgatgcc 63777 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 75510 ggccttgatggcggtgcaga 75529
>dbj|AK062654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-105-E10, full insert sequence Length = 736 Score = 69.9 bits (35), Expect = 5e-09 Identities = 65/75 (86%) Strand = Plus / Minus Query: 280 agttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcct 339 ||||||||| |||| ||||| || ||||| |||||||| |||||| || |||| ||||| Sbjct: 475 agttgaggaggaggacgaggtcgacggggacgttgatgttgatgccgaggacgttggcct 416 Query: 340 tgatggcggtgcaga 354 ||||||||||||||| Sbjct: 415 tgatggcggtgcaga 401
>ref|NM_197674.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.13), mRNA Length = 396 Score = 67.9 bits (34), Expect = 2e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || ||||||||||| || |||||| ||||| | |||||| Sbjct: 357 gttgaggatgaggctcagatcgacggggaggttgaggttgatgcccagcacattggcctt 298 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 297 gacggcggtgcaga 284
>ref|XM_467171.1| Oryza sativa (japonica cultivar-group), mRNA Length = 757 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 269 cttgccgcaaaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 328 ||||||||| |||||| || ||||||||| | || ||||| || || | |||||| || Sbjct: 440 cttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccgag 381 Query: 329 cacgtcggccttgatggcggtgcaga 354 ||||| |||||||||||||||||||| Sbjct: 380 cacgttggccttgatggcggtgcaga 355
>ref|NM_197675.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.12), mRNA Length = 396 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || |||||| || | || |||||| ||||||| |||||| Sbjct: 357 gttgaggatgaggctcagatcgacggggagattcaggttgatgcccagcacgttggcctt 298 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 297 gacggcggtgcaga 284
>dbj|AK058218.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-010-F04, full insert sequence Length = 757 Score = 60.0 bits (30), Expect = 5e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 269 cttgccgcaaaagttgaggatgaggctgaggtggatggggaggttgatgtggatgcctag 328 ||||||||| |||||| || ||||||||| | || ||||| || || | |||||| || Sbjct: 440 cttgccgcagtagttgacgaggaggctgagcttgacggggatgtcgagggtgatgccgag 381 Query: 329 cacgtcggccttgatggcggtgcaga 354 ||||| |||||||||||||||||||| Sbjct: 380 cacgttggccttgatggcggtgcaga 355
>gb|AY106116.1| Zea mays PCO091367 mRNA sequence Length = 842 Score = 60.0 bits (30), Expect = 5e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 261 gggacgcccttgccgcaaaagttgaggatgaggctgaggtggatggggaggttgatgtgg 320 ||||||| | ||||||| |||||| || ||||||||||| |||||| ||||||| || | Sbjct: 549 gggacgcgcctgccgcagtagttgacgaggaggctgaggttgatgggcaggttgaggttg 490 Query: 321 atgcctagcacgtcggccttgatggcggtgcaga 354 ||||| || |||| |||| ||| | ||||||||| Sbjct: 489 atgcccaggacgttggccctgaggacggtgcaga 456
>gb|AY104687.1| Zea mays PCO121733 mRNA sequence Length = 680 Score = 60.0 bits (30), Expect = 5e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||| ||||| | ||| | ||||| ||||||||| || |||| |||||| Sbjct: 427 gttgaggatgaggttgaggctaaggggcacgttgaggtggatgccgaggacgttggcctt 368 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 367 gatggcggtgcaga 354
>emb|Z12103.1|ZMDELINM Z.mays mRNA that delineates a novel subset of cortical cells Length = 594 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 311 gttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 ||||| ||||||||| || |||| |||||||||||||||||||| Sbjct: 335 gttgaggtggatgccgaggacgttggccttgatggcggtgcaga 292
>ref|NM_197672.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.15), mRNA Length = 429 Score = 54.0 bits (27), Expect = 3e-04 Identities = 65/77 (84%), Gaps = 3/77 (3%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatg---cctagcacgtcggc 337 |||||||||||||||||| | || ||||| ||||| || |||| || || |||| ||| Sbjct: 390 gttgaggatgaggctgagatcgacggggatgttgaggttgatgatcccaagaacgttggc 331 Query: 338 cttgatggcggtgcaga 354 ||||||||||||||||| Sbjct: 330 cttgatggcggtgcaga 314
>dbj|AK102086.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082M21, full insert sequence Length = 769 Score = 54.0 bits (27), Expect = 3e-04 Identities = 65/77 (84%), Gaps = 3/77 (3%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatg---cctagcacgtcggc 337 |||||||||||||||||| | || ||||| ||||| || |||| || || |||| ||| Sbjct: 469 gttgaggatgaggctgagatcgacggggatgttgaggttgatgatcccaagaacgttggc 410 Query: 338 cttgatggcggtgcaga 354 ||||||||||||||||| Sbjct: 409 cttgatggcggtgcaga 393
>gb|AY105236.1| Zea mays PCO121732 mRNA sequence Length = 763 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 312 ttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 |||| ||||||||| || |||| |||||||||||||||||||| Sbjct: 402 ttgaggtggatgccgaggacgttggccttgatggcggtgcaga 360
>ref|NM_197676.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.11), mRNA Length = 411 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||||| || | || || |||||||| | ||||| ||||||| |||||| Sbjct: 372 gttgaggatgaggcttagatcgacggcgaggttgagtttcatgccgagcacgttggcctt 313 Query: 341 gatggcggtgcaga 354 || ||||||||||| Sbjct: 312 gacggcggtgcaga 299
>gb|AY105972.1| Zea mays PCO122221 mRNA sequence Length = 768 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||||||||||| || ||| ||||||| | ||| || || || || |||| Sbjct: 432 gttgaggatgaggctgaggtcgacgggcaggttgagcttgattccgaggacctctccctt 373 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 372 gatggcggtgcaga 359
>gb|AF001634.1|AF001634 Zea mays physical impedance induced protein (IIG1) mRNA, complete cds Length = 677 Score = 52.0 bits (26), Expect = 0.001 Identities = 62/74 (83%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 ||||||||||||| ||||| | ||| | || || ||||||||| || |||| |||||| Sbjct: 440 gttgaggatgaggttgaggctaaggggcacgtggaggtggatgccgaggacgttggcctt 381 Query: 341 gatggcggtgcaga 354 |||||||||||||| Sbjct: 380 gatggcggtgcaga 367
>gb|AC145163.5| Mus musculus BAC clone RP24-238C5 from chromosome 12, complete sequence Length = 194429 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 89 aaacaatacaaaacaactaaagcaaagcaaa 119 |||||| |||||||||| ||||||||||||| Sbjct: 3653 aaacaaaacaaaacaacaaaagcaaagcaaa 3683
>gb|AC132189.13| Mus musculus chromosome 12, clone RP24-95M20, complete sequence Length = 203534 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Plus Query: 89 aaacaatacaaaacaactaaagcaaagcaaa 119 |||||| |||||||||| ||||||||||||| Sbjct: 71203 aaacaaaacaaaacaacaaaagcaaagcaaa 71233
>gb|AC126685.5| Mus musculus BAC clone RP23-103I23 from chromosome 12, complete sequence Length = 193708 Score = 46.1 bits (23), Expect = 0.076 Identities = 29/31 (93%) Strand = Plus / Minus Query: 89 aaacaatacaaaacaactaaagcaaagcaaa 119 |||||| |||||||||| ||||||||||||| Sbjct: 8499 aaacaaaacaaaacaacaaaagcaaagcaaa 8469
>emb|AL845455.7| Mouse DNA sequence from clone RP23-325E4 on chromosome 2, complete sequence Length = 143689 Score = 46.1 bits (23), Expect = 0.076 Identities = 23/23 (100%) Strand = Plus / Minus Query: 185 ccccttttctttgtgggagatca 207 ||||||||||||||||||||||| Sbjct: 49671 ccccttttctttgtgggagatca 49649
>ref|NM_197671.1| Oryza sativa (japonica cultivar-group) putative lipid transfer protein (OSJNBa0015J15.16), mRNA Length = 441 Score = 44.1 bits (22), Expect = 0.30 Identities = 61/74 (82%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 402 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 343 Query: 341 gatggcggtgcaga 354 | ||||||||||| Sbjct: 342 cacggcggtgcaga 329
>gb|AE014309.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 6 of 11 of the complete sequence Length = 250029 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 taaagcaaagcaaataattgaa 127 |||||||||||||||||||||| Sbjct: 101057 taaagcaaagcaaataattgaa 101078
>ref|XM_644188.1| Entamoeba histolytica HM-1:IMSS non-transporter ABC protein, putative (324.t00005) partial mRNA Length = 2175 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aaagcaaagcaaataattgaac 128 |||||||||||||||||||||| Sbjct: 295 aaagcaaagcaaataattgaac 316
>ref|XM_644246.1| Entamoeba histolytica HM-1:IMSS non-transporter ABC protein, putative (315.t00009) partial mRNA Length = 849 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aaagcaaagcaaataattgaac 128 |||||||||||||||||||||| Sbjct: 295 aaagcaaagcaaataattgaac 316
>ref|XM_645518.1| Entamoeba histolytica HM-1:IMSS non-transporter ABC protein, putative (208.t00001) partial mRNA Length = 1953 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 107 aaagcaaagcaaataattgaac 128 |||||||||||||||||||||| Sbjct: 73 aaagcaaagcaaataattgaac 94
>emb|AL603713.6| Human DNA sequence from clone RP11-17C16 on chromosome 13, complete sequence Length = 83989 Score = 44.1 bits (22), Expect = 0.30 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 taaagcaaagcaaataattgaa 127 |||||||||||||||||||||| Sbjct: 79702 taaagcaaagcaaataattgaa 79723
>gb|L27210.1|RICRCG2 Oryza sativa root-specific protein (RCg2) gene, complete cds Length = 2252 Score = 44.1 bits (22), Expect = 0.30 Identities = 61/74 (82%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 2058 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 1999 Query: 341 gatggcggtgcaga 354 | ||||||||||| Sbjct: 1998 cacggcggtgcaga 1985
>gb|L27209.1|RICRCC2 Oryza sativa root-specific RCc2 mRNA, complete cds Length = 654 Score = 44.1 bits (22), Expect = 0.30 Identities = 61/74 (82%) Strand = Plus / Minus Query: 281 gttgaggatgaggctgaggtggatggggaggttgatgtggatgcctagcacgtcggcctt 340 |||||||||||| |||| | || ||||| ||||| || || ||| ||||||| |||||| Sbjct: 446 gttgaggatgagcttgagctcgacggggacgttgaggttgacgccgagcacgttggcctt 387 Query: 341 gatggcggtgcaga 354 | ||||||||||| Sbjct: 386 cacggcggtgcaga 373
>ref|XM_474092.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 783 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 302 gatggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 |||||||| || |||| |||| | ||||| | |||||||||||||||||||| Sbjct: 723 gatggggatgtagatgctgatgtcgagcaccttggccttgatggcggtgcaga 671
>gb|AC150551.1| Drosophila melanogaster clone BACR16A12, complete sequence Length = 185417 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 gtggatggggaggttgatgtggatg 323 ||||||||||| ||||||||||||| Sbjct: 19421 gtggatggggatgttgatgtggatg 19445
>ref|XM_745244.1| Aspergillus fumigatus Af293 hypothetical protein (Afu1g05870) partial mRNA Length = 969 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 aggtggatggggaggttgatg 317 ||||||||||||||||||||| Sbjct: 719 aggtggatggggaggttgatg 739
>gb|AC158746.8| Mus musculus chromosome 1, clone RP23-50E17, complete sequence Length = 245991 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 99 aaacaactaaagcaaagcaaa 119 ||||||||||||||||||||| Sbjct: 97992 aaacaactaaagcaaagcaaa 97972
>gb|AF512516.1| Tigriopus californicus isolate AB pyrroline-5-carboxylase synthase (P5CS) gene, partial cds Length = 2668 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gaaatcatgcatgcatgcatg 167 ||||||||||||||||||||| Sbjct: 519 gaaatcatgcatgcatgcatg 539
>gb|AC115482.2| Drosophila melanogaster, chromosome 2L, region 21D-21D, BAC clone BACR04A24, complete sequence Length = 166677 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 gtggatggggaggttgatgtggatg 323 ||||||||||| ||||||||||||| Sbjct: 24856 gtggatggggatgttgatgtggatg 24880
>gb|AC084866.5| Homo sapiens BAC clone RP11-6E9 from 4, complete sequence Length = 196852 Score = 42.1 bits (21), Expect = 1.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 286 ggatgaggctgaggtggatgg 306 ||||||||||||||||||||| Sbjct: 109562 ggatgaggctgaggtggatgg 109582
>dbj|AP005820.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0091C16 Length = 162527 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 181 gcatccccttttctttgtgggagat 205 |||||||||||||||||| |||||| Sbjct: 113520 gcatccccttttctttgtaggagat 113544
>dbj|AK105903.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-F11, full insert sequence Length = 1255 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 302 gatggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 |||||||| || |||| |||| | ||||| | |||||||||||||||||||| Sbjct: 873 gatggggatgtagatgctgatgtcgagcaccttggccttgatggcggtgcaga 821
>dbj|AK105778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-F10, full insert sequence Length = 1242 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 302 gatggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 |||||||| || |||| |||| | ||||| | |||||||||||||||||||| Sbjct: 873 gatggggatgtagatgctgatgtcgagcaccttggccttgatggcggtgcaga 821
>dbj|AK104623.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H11, full insert sequence Length = 1251 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 302 gatggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 |||||||| || |||| |||| | ||||| | |||||||||||||||||||| Sbjct: 869 gatggggatgtagatgctgatgtcgagcaccttggccttgatggcggtgcaga 817
>dbj|AK071989.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094H13, full insert sequence Length = 1272 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 302 gatggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 |||||||| || |||| |||| | ||||| | |||||||||||||||||||| Sbjct: 877 gatggggatgtagatgctgatgtcgagcaccttggccttgatggcggtgcaga 825
>dbj|AK061322.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-F03, full insert sequence Length = 1257 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Minus Query: 302 gatggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 |||||||| || |||| |||| | ||||| | |||||||||||||||||||| Sbjct: 875 gatggggatgtagatgctgatgtcgagcaccttggccttgatggcggtgcaga 823
>emb|AL732331.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0413E07, complete sequence Length = 76546 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 302 gatggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 |||||||| || |||| |||| | ||||| | |||||||||||||||||||| Sbjct: 22431 gatggggatgtagatgctgatgtcgagcaccttggccttgatggcggtgcaga 22483
>gb|AE003589.4| Drosophila melanogaster chromosome 2L, section 2 of 83 of the complete sequence Length = 306076 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 gtggatggggaggttgatgtggatg 323 ||||||||||| ||||||||||||| Sbjct: 53014 gtggatggggatgttgatgtggatg 53038
>gb|AC005762.1|AC005762 Drosophila melanogaster DNA sequence (P1s DS00679 (D272) and DS05054 (D135)), complete sequence Length = 81053 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 gtggatggggaggttgatgtggatg 323 ||||||||||| ||||||||||||| Sbjct: 2382 gtggatggggatgttgatgtggatg 2406
>emb|AL606454.3|OSJN00009 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0033G05, complete sequence Length = 142556 Score = 42.1 bits (21), Expect = 1.2 Identities = 45/53 (84%) Strand = Plus / Plus Query: 302 gatggggaggttgatgtggatgcctagcacgtcggccttgatggcggtgcaga 354 |||||||| || |||| |||| | ||||| | |||||||||||||||||||| Sbjct: 89482 gatggggatgtagatgctgatgtcgagcaccttggccttgatggcggtgcaga 89534
>gb|AC004115.1|AC004115 Drosophila melanogaster (P1 DS02374 (D136)) DNA sequence, complete sequence Length = 80101 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 299 gtggatggggaggttgatgtggatg 323 ||||||||||| ||||||||||||| Sbjct: 79878 gtggatggggatgttgatgtggatg 79902
>gb|AC153551.4| Mus musculus 10 BAC RP23-383A7 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216106 Score = 42.1 bits (21), Expect = 1.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 95 tacaaaacaactaaagcaaagcaaa 119 ||||||||||| ||||||||||||| Sbjct: 85653 tacaaaacaacaaaagcaaagcaaa 85629
>gb|BC085504.1| Mus musculus vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone IMAGE:6404318), partial cds Length = 2687 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1604 gaggatgaggctgaggtgga 1585
>ref|XM_516360.1| PREDICTED: Pan troglodytes similar to KIAA0342 protein (LOC460261), mRNA Length = 3315 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gaggctgaggtggatgggga 309 |||||||||||||||||||| Sbjct: 3025 gaggctgaggtggatgggga 3044
>ref|XM_473863.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 465 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 366 ggccttgatggcggtgcaga 347
>ref|XM_473862.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 609 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 492 ggccttgatggcggtgcaga 473
>ref|XM_473450.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 414 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 327 agcacgtcggccttgatggcggtgcaga 354 ||||||| |||||||||||| ||||||| Sbjct: 326 agcacgttggccttgatggccgtgcaga 299
>gb|AY673603.1| Homo sapiens matrix metalloproteinase 20 (enamelysin) (MMP20) gene, complete cds Length = 52428 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccttttctttgtgggagat 205 |||||||||||||||||||| Sbjct: 33858 cccttttctttgtgggagat 33877
>gb|AC183665.2| Pan troglodytes BAC clone CH251-655J2 from chromosome unknown, complete sequence Length = 194692 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 acaatacaaaacaactaaag 110 |||||||||||||||||||| Sbjct: 120651 acaatacaaaacaactaaag 120632
>ref|XM_813626.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053511725.80) partial mRNA Length = 6783 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 aaagtaaaatgcaatggcca 58 |||||||||||||||||||| Sbjct: 2076 aaagtaaaatgcaatggcca 2057
>gb|AY466108.1| Oryza sativa (japonica cultivar-group) lipid transfer protein-like protein (LTP1) mRNA, complete cds Length = 772 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 438 ggccttgatggcggtgcaga 419
>ref|XM_849546.1| PREDICTED: Canis familiaris similar to matrix metalloproteinase 20 preproprotein (LOC611829), mRNA Length = 1452 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccttttctttgtgggagat 205 |||||||||||||||||||| Sbjct: 1217 cccttttctttgtgggagat 1236
>ref|NM_174391.2| Bos taurus matrix metalloproteinase 20 (enamelysin) (MMP20), mRNA Length = 2123 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccttttctttgtgggagat 205 |||||||||||||||||||| Sbjct: 1215 cccttttctttgtgggagat 1234
>emb|AL138680.15| Human DNA sequence from clone RP11-110K8 on chromosome 13 Contains the 5' end of the EFHA1 gene for EF hand domain family, member A1, a farnesyltransferase, CAAX box, alpha (FNTA)(FPTA, PGGT1A) pseudogene and a CpG island, complete sequence Length = 95093 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 112 aaagcaaataattgaacgta 131 |||||||||||||||||||| Sbjct: 60118 aaagcaaataattgaacgta 60099
>emb|Y12779.1|HSENAMELY H.sapiens mRNA for enamelysin Length = 1674 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccttttctttgtgggagat 205 |||||||||||||||||||| Sbjct: 1230 cccttttctttgtgggagat 1249
>gb|BC099678.1| Mus musculus vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone MGC:106088 IMAGE:6311681), complete cds Length = 2800 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1667 gaggatgaggctgaggtgga 1648
>ref|NM_004771.3| Homo sapiens matrix metallopeptidase 20 (enamelysin) (MMP20), mRNA Length = 1956 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccttttctttgtgggagat 205 |||||||||||||||||||| Sbjct: 1230 cccttttctttgtgggagat 1249
>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17, complete sequence Length = 160484 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 78097 ggccttgatggcggtgcaga 78078 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 67678 ggccttgatggcggtgcaga 67659
>gb|BC025496.1| Mus musculus vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone MGC:38107 IMAGE:5320239), complete cds Length = 2705 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1641 gaggatgaggctgaggtgga 1622
>gb|AC009377.7| Drosophila melanogaster 3L BAC RP98-26P20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 194308 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 aagcaaagcaaataattgaa 127 |||||||||||||||||||| Sbjct: 173038 aagcaaagcaaataattgaa 173057
>dbj|AK096678.1| Homo sapiens cDNA FLJ39359 fis, clone PEBLM2004290 Length = 2439 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gaggctgaggtggatgggga 309 |||||||||||||||||||| Sbjct: 1612 gaggctgaggtggatgggga 1631
>dbj|AK145193.1| Mus musculus mammary gland RCB-0527 Jyg-MC(B) cDNA, RIKEN full-length enriched library, clone:G930017D13 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2773 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1723 gaggatgaggctgaggtgga 1704
>gb|AC097360.2| Homo sapiens chromosome 3 clone RP11-344C13, complete sequence Length = 166349 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gaggctgaggtggatgggga 309 |||||||||||||||||||| Sbjct: 162399 gaggctgaggtggatgggga 162380
>dbj|AK154965.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630113D13 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2723 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1669 gaggatgaggctgaggtgga 1650
>ref|XM_940627.1| PREDICTED: Homo sapiens lupus brain antigen 1 (LBA1), mRNA Length = 10713 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gaggctgaggtggatgggga 309 |||||||||||||||||||| Sbjct: 4231 gaggctgaggtggatgggga 4250
>ref|XM_047357.5| PREDICTED: Homo sapiens lupus brain antigen 1 (LBA1), mRNA Length = 10839 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gaggctgaggtggatgggga 309 |||||||||||||||||||| Sbjct: 4357 gaggctgaggtggatgggga 4376
>dbj|AK159315.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420015I18 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2725 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1670 gaggatgaggctgaggtgga 1651
>dbj|AK159310.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420015H08 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2685 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1629 gaggatgaggctgaggtgga 1610
>dbj|AK155342.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630221F09 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2743 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1687 gaggatgaggctgaggtgga 1668
>dbj|AK160891.1| Mus musculus 12 days embryo embryonic body below diaphragm region cDNA, RIKEN full-length enriched library, clone:3732415E22 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2725 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1677 gaggatgaggctgaggtgga 1658
>dbj|AK154178.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630006K22 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 4655 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1770 gaggatgaggctgaggtgga 1751
>gb|AC160829.3| Xenopus tropicalis MLC2 gene, complete cds, complete sequence Length = 62506 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 268 ccttgccgcaaaagttgaggatgaggct 295 |||||| || |||||||||||||||||| Sbjct: 14564 ccttgcagccaaagttgaggatgaggct 14591
>dbj|AK170371.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101H10 product:vesicle amine transport protein 1 homolog (T californica), full insert sequence Length = 2715 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1666 gaggatgaggctgaggtgga 1647
>gb|BC024586.1| Mus musculus vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone IMAGE:5066189), partial cds Length = 1986 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 916 gaggatgaggctgaggtgga 897
>gb|BC036169.1| Mus musculus vesicle amine transport protein 1 homolog (T californica), mRNA (cDNA clone IMAGE:4987705), partial cds Length = 2191 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1127 gaggatgaggctgaggtgga 1108
>dbj|AK034795.1| Mus musculus 12 days embryo embryonic body between diaphragm region and neck cDNA, RIKEN full-length enriched library, clone:9430039M12 product:SYNAPTIC VESICLE MEMBRANE PROTEIN VAT-1 HOMOLOG (FRAGMENT), full insert sequence Length = 2735 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1687 gaggatgaggctgaggtgga 1668
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 aaatcatgcatgcatgcatg 167 |||||||||||||||||||| Sbjct: 16066354 aaatcatgcatgcatgcatg 16066373
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tcatgcatgcatgcatggac 170 |||||||||||||||||||| Sbjct: 11945244 tcatgcatgcatgcatggac 11945263
>gb|AC011816.17|AC011816 Homo sapiens chromosome 3, clone RP11-129K12, complete sequence Length = 169313 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 gaggctgaggtggatgggga 309 |||||||||||||||||||| Sbjct: 5500 gaggctgaggtggatgggga 5481
>ref|NM_213905.1| Sus scrofa matrix metalloproteinase (MMP20), mRNA Length = 3393 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccttttctttgtgggagat 205 |||||||||||||||||||| Sbjct: 1230 cccttttctttgtgggagat 1249
>dbj|AP004375.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0475C12 Length = 140863 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 aaatcatgcatgcatgcatg 167 |||||||||||||||||||| Sbjct: 138393 aaatcatgcatgcatgcatg 138412
>dbj|AP006529.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1114D08 Length = 148354 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tcatgcatgcatgcatggac 170 |||||||||||||||||||| Sbjct: 76285 tcatgcatgcatgcatggac 76304
>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0724B10 Length = 169143 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tcatgcatgcatgcatggac 170 |||||||||||||||||||| Sbjct: 73300 tcatgcatgcatgcatggac 73319
>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1218_D07 Length = 114511 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tcatgcatgcatgcatggac 170 |||||||||||||||||||| Sbjct: 110193 tcatgcatgcatgcatggac 110212
>dbj|AP005726.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0028A18 Length = 151080 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 aaatcatgcatgcatgcatg 167 |||||||||||||||||||| Sbjct: 4434 aaatcatgcatgcatgcatg 4453
>dbj|AK103618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133L09, full insert sequence Length = 780 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 459 ggccttgatggcggtgcaga 440
>gb|AC000066.1|AC000066 Homo sapiens BAC clone CTA-293F11 from 7q21-7q22, complete sequence Length = 94960 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 acaatacaaaacaactaaag 110 |||||||||||||||||||| Sbjct: 81071 acaatacaaaacaactaaag 81052
>emb|AJ010770.1|HSA010770 Homo sapiens hyperion gene, exons 1-50 Length = 170008 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 acaatacaaaacaactaaag 110 |||||||||||||||||||| Sbjct: 95180 acaatacaaaacaactaaag 95161
>dbj|AK062781.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-B03, full insert sequence Length = 713 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 226 ggccttgatggcggtgcaga 207
>dbj|AK062295.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-F05, full insert sequence Length = 570 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 ggccttgatggcggtgcaga 354 |||||||||||||||||||| Sbjct: 142 ggccttgatggcggtgcaga 123
>gb|AE003517.3| Drosophila melanogaster chromosome 3L, section 68 of 83 of the complete sequence Length = 257692 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 aagcaaagcaaataattgaa 127 |||||||||||||||||||| Sbjct: 232167 aagcaaagcaaataattgaa 232186
>dbj|AP000851.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-817J15, complete sequences Length = 172981 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cccttttctttgtgggagat 205 |||||||||||||||||||| Sbjct: 46569 cccttttctttgtgggagat 46550
>ref|NM_012037.1| Mus musculus vesicle amine transport protein 1 homolog (T californica) (Vat1), mRNA Length = 2735 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 1687 gaggatgaggctgaggtgga 1668
>gb|AF009922.1|AF009922 Bos taurus enamel metalloproteinase precursor mRNA, complete cds Length = 2123 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccttttctttgtgggagat 205 |||||||||||||||||||| Sbjct: 1215 cccttttctttgtgggagat 1234
>gb|U54825.1|SSU54825 Sus scrofa matrix metalloproteinase mRNA, complete cds Length = 3424 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cccttttctttgtgggagat 205 |||||||||||||||||||| Sbjct: 1230 cccttttctttgtgggagat 1249
>emb|AL590996.12| Mouse DNA sequence from clone RP23-328K2 on chromosome 11, complete sequence Length = 139242 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gaggatgaggctgaggtgga 303 |||||||||||||||||||| Sbjct: 38533 gaggatgaggctgaggtgga 38552
>dbj|AB018588.1| Zea mays ZmGR1b mRNA, complete cds Length = 813 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 327 agcacgtcggccttgatggcggtgcaga 354 ||||||| |||||||||||| ||||||| Sbjct: 357 agcacgttggccttgatggccgtgcaga 330
>dbj|AB018587.1| Zea mays ZmGR1a mRNA, complete cds Length = 833 Score = 40.1 bits (20), Expect = 4.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 327 agcacgtcggccttgatggcggtgcaga 354 ||||||| |||||||||||| ||||||| Sbjct: 360 agcacgttggccttgatggccgtgcaga 333
>dbj|AB002340.3| Homo sapiens mRNA for KIAA0342 protein, partial cds Length = 8859 Score = 40.1 bits (20), Expect = 4.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 gaggctgaggtggatgggga 309 |||||||||||||||||||| Sbjct: 2374 gaggctgaggtggatgggga 2393 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,428,506 Number of Sequences: 3902068 Number of extensions: 3428506 Number of successful extensions: 111277 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 133 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 110382 Number of HSP's gapped (non-prelim): 887 length of query: 354 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 332 effective length of database: 17,147,199,772 effective search space: 5692870324304 effective search space used: 5692870324304 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)