ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart33a09 |
|---|---|
| Clone Library Name | barley_pub |
>HPPD_HORVU (O48604) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 434 Score = 207 bits (527), Expect = 9e-54 Identities = 106/115 (92%), Positives = 106/115 (92%) Frame = -3 Query: 446 LPPPLPKYYEGVRRLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLE 267 LPPPLPKYYEGVRRLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLE Sbjct: 320 LPPPLPKYYEGVRRLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLE 379 Query: 266 MIQRIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIEDYEKSLEAKQSAAVQGS 102 MIQRIGCMEKDERGEEYQ GNFSELFKSIEDYEKSLEAKQSAAVQGS Sbjct: 380 MIQRIGCMEKDERGEEYQKGGCGGFGKGNFSELFKSIEDYEKSLEAKQSAAVQGS 434
>HPPD_ARATH (P93836) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 445 Score = 154 bits (388), Expect = 1e-37 Identities = 72/108 (66%), Positives = 88/108 (81%) Frame = -3 Query: 446 LPPPLPKYYEGVRRLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLE 267 +P P P YY+ +++ GDVLS+ QIKEC+ELG+LVDRDDQG LLQIFTKP+GDRPT+F+E Sbjct: 335 MPSPPPTYYQNLKKRVGDVLSDDQIKECEELGILVDRDDQGTLLQIFTKPLGDRPTIFIE 394 Query: 266 MIQRIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIEDYEKSLEAKQ 123 +IQR+GCM KDE G+ YQ GNFSELFKSIE+YEK+LEAKQ Sbjct: 395 IIQRVGCMMKDEEGKAYQSGGCGGFGKGNFSELFKSIEEYEKTLEAKQ 442
>HPPD_DAUCA (O23920) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 442 Score = 151 bits (382), Expect = 6e-37 Identities = 72/108 (66%), Positives = 87/108 (80%) Frame = -3 Query: 446 LPPPLPKYYEGVRRLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLE 267 +P P P YY+ ++ GDVLS+ QIKEC++LG+LVDRDDQG LLQIFTKPVGDRPTLF+E Sbjct: 328 MPSPPPTYYKNLKNRVGDVLSDEQIKECEDLGILVDRDDQGTLLQIFTKPVGDRPTLFIE 387 Query: 266 MIQRIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIEDYEKSLEAKQ 123 +IQR+GCM KD+ G+ YQ GNFSELFKSIE+YEK+LEAKQ Sbjct: 388 IIQRVGCMLKDDAGQMYQKGGCGGFGKGNFSELFKSIEEYEKTLEAKQ 435
>HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 436 Score = 147 bits (372), Expect = 9e-36 Identities = 70/107 (65%), Positives = 85/107 (79%) Frame = -3 Query: 446 LPPPLPKYYEGVRRLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLE 267 +P P P YY ++ AGDVLS+ QI+EC++LG+L+DRDDQG LLQIFTKPVGDRPTLF+E Sbjct: 322 MPSPPPTYYRNLKSRAGDVLSDEQIEECEKLGILIDRDDQGTLLQIFTKPVGDRPTLFIE 381 Query: 266 MIQRIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIEDYEKSLEAK 126 +IQR+GCM KDE G+ YQ GNFSELFKSIE+YEK LE+K Sbjct: 382 IIQRVGCMMKDEEGKMYQKGGCGGFGKGNFSELFKSIEEYEKMLESK 428
>HPPD_BRARE (Q6TGZ5) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 397 Score = 64.7 bits (156), Expect = 1e-10 Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 2/59 (3%) Frame = -3 Query: 425 YYEGVRRL--AGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 255 YYE +R + + +K QEL +LVD DD+G LLQIFTKPV DRPTLFLE+IQR Sbjct: 296 YYESLREKLKTAKIKVKEDLKTLQELKILVDFDDKGYLLQIFTKPVQDRPTLFLEVIQR 354
>HPPD_STRCO (Q9S2F4) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 381 Score = 63.5 bits (153), Expect = 2e-10 Identities = 39/91 (42%), Positives = 51/91 (56%) Frame = -3 Query: 425 YYEGVRRLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGC 246 YY+ + AG+ + + +EL +LVDRD+ G LLQIFTKPV DRPT+F EMI+R G Sbjct: 299 YYDTLGEWAGE--TRVPVDVLRELKILVDRDEDGYLLQIFTKPVQDRPTVFFEMIERHGS 356 Query: 245 MEKDERGEEYQXXXXXXXXXGNFSELFKSIE 153 M GNF LF++IE Sbjct: 357 M---------------GFGKGNFKALFEAIE 372
>HPPD_XENTR (Q5BKL0) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 394 Score = 62.0 bits (149), Expect = 6e-10 Identities = 32/59 (54%), Positives = 41/59 (69%), Gaps = 2/59 (3%) Frame = -3 Query: 425 YYEGVRRL--AGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 255 YYE +R+ + + + QEL +LVD DD+G LLQIFTKP+ DRPTLFLE+IQR Sbjct: 296 YYEELRKKLKTAKITVKEDLNVLQELKILVDYDDKGYLLQIFTKPMQDRPTLFLEVIQR 354
>HPPD_STRAW (Q53586) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 381 Score = 60.8 bits (146), Expect = 1e-09 Identities = 37/91 (40%), Positives = 49/91 (53%) Frame = -3 Query: 425 YYEGVRRLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGC 246 YY+ + GD + + +EL +L DRD+ G LLQIFTKPV DRPT+F E+I+R G Sbjct: 299 YYDTLGEWVGD--TRVPVDTLRELKILADRDEDGYLLQIFTKPVQDRPTVFFEIIERHGS 356 Query: 245 MEKDERGEEYQXXXXXXXXXGNFSELFKSIE 153 M GNF LF++IE Sbjct: 357 M---------------GFGKGNFKALFEAIE 372
>HPPD_RAT (P32755) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (4-hydroxyphenylpyruvic acid oxidase) (HPPDase) (F protein) (F Alloantigen) Length = 392 Score = 59.7 bits (143), Expect = 3e-09 Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Frame = -3 Query: 386 SEAQIKE----CQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEE 219 S+ Q+KE +EL +LVD D++G LLQIFTKP+ DRPTLFLE+IQR + +G Sbjct: 305 SKIQVKENMDVLEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQR-----HNHQG-- 357 Query: 218 YQXXXXXXXXXGNFSELFKSIED 150 GNF+ LFK+ E+ Sbjct: 358 --------FGAGNFNSLFKAFEE 372
>HPPD_HUMAN (P32754) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 392 Score = 59.7 bits (143), Expect = 3e-09 Identities = 39/94 (41%), Positives = 53/94 (56%), Gaps = 2/94 (2%) Frame = -3 Query: 425 YYEGVRRL--AGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRI 252 YY+ +R + + I +EL +LVD D++G LLQIFTKPV DRPTLFLE+IQR Sbjct: 294 YYKQLREKLKTAKIKVKENIDALEELKILVDYDEKGYLLQIFTKPVQDRPTLFLEVIQR- 352 Query: 251 GCMEKDERGEEYQXXXXXXXXXGNFSELFKSIED 150 + +G GNF+ LFK+ E+ Sbjct: 353 ----HNHQG----------FGAGNFNSLFKAFEE 372
>HPPD_MOUSE (P49429) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (4-hydroxyphenylpyruvic acid oxidase) (HPPDase) (F protein) (F Alloantigen) Length = 392 Score = 58.5 bits (140), Expect = 7e-09 Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 4/83 (4%) Frame = -3 Query: 386 SEAQIKEC----QELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEE 219 ++ Q+KE +EL +LVD D++G LLQIFTKP+ DRPTLFLE+IQR + +G Sbjct: 305 AKIQVKESMDVLEELHILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQR-----HNHQG-- 357 Query: 218 YQXXXXXXXXXGNFSELFKSIED 150 GNF+ LFK+ E+ Sbjct: 358 --------FGAGNFNSLFKAFEE 372
>HPPD_CAEBR (Q60Y65) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 393 Score = 58.2 bits (139), Expect = 9e-09 Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 4/95 (4%) Frame = -3 Query: 425 YYEGVRRLAGDVLSEAQIKE----CQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQ 258 YY+ +R+ +S +IKE Q+L +LVD D+ G LLQIF+KP DRPTLFLE+IQ Sbjct: 296 YYDNLRQRLS--VSSMKIKEDMDRLQKLHILVDFDENGYLLQIFSKPCQDRPTLFLEIIQ 353 Query: 257 RIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIE 153 R ++ +G GNF LF+SIE Sbjct: 354 R-----QNHQG----------FGAGNFKALFESIE 373
>HPPD_BOVIN (Q5EA20) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 392 Score = 58.2 bits (139), Expect = 9e-09 Identities = 39/96 (40%), Positives = 57/96 (59%), Gaps = 4/96 (4%) Frame = -3 Query: 425 YYEGVRRLAGDVLSEAQIKE----CQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQ 258 YY+ +R +++ ++KE +EL +LVD D++G LLQIFTKP+ DRPTLFLE+IQ Sbjct: 294 YYKQLREKLK--MAKIRVKENIDILEELKILVDYDEKGYLLQIFTKPMQDRPTLFLEVIQ 351 Query: 257 RIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIED 150 R + +G GNF+ LFK+ E+ Sbjct: 352 R-----HNHQG----------FGAGNFNSLFKAFEE 372
>HPPD_YARLI (Q6CDR5) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 394 Score = 57.8 bits (138), Expect = 1e-08 Identities = 30/59 (50%), Positives = 43/59 (72%), Gaps = 2/59 (3%) Frame = -3 Query: 425 YYEGVR-RLAGDVLS-EAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 255 YYE ++ RLA L E + ++ Q L +L+D D+ G LLQ+FTKP+ DRPT+F+E+IQR Sbjct: 308 YYENMKERLAKSSLKLEEKFEDIQALNILIDFDEGGYLLQLFTKPLMDRPTVFIEIIQR 366
>HPPD_CAEEL (Q22633) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 393 Score = 57.4 bits (137), Expect = 2e-08 Identities = 38/93 (40%), Positives = 52/93 (55%), Gaps = 2/93 (2%) Frame = -3 Query: 425 YYEGV--RRLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRI 252 YY+ + R A ++ + + Q+L +LVD D+ G LLQIF+KP DRPTLFLE+IQR Sbjct: 296 YYDNLKERLAASSMVVKEDMDRLQKLHILVDFDENGYLLQIFSKPCQDRPTLFLEIIQR- 354 Query: 251 GCMEKDERGEEYQXXXXXXXXXGNFSELFKSIE 153 ++ G GNF LF+SIE Sbjct: 355 ----QNHEG----------FGAGNFKALFESIE 373
>HPPD_PIG (Q02110) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 392 Score = 57.0 bits (136), Expect = 2e-08 Identities = 33/74 (44%), Positives = 47/74 (63%) Frame = -3 Query: 362 QELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEEYQXXXXXXXXXG 183 +EL +LVD D++G LLQIFTKP+ DRPT+FLE+IQR + +G G Sbjct: 317 EELKILVDYDEKGYLLQIFTKPMQDRPTVFLEVIQR-----NNHQG----------FGAG 361 Query: 182 NFSELFKSIEDYEK 141 NF+ LFK+ E+ ++ Sbjct: 362 NFNSLFKAFEEEQE 375
>YBWL_CAEEL (Q18347) Hypothetical protein C31H2.4 in chromosome X| Length = 364 Score = 55.8 bits (133), Expect = 5e-08 Identities = 27/60 (45%), Positives = 43/60 (71%), Gaps = 2/60 (3%) Frame = -3 Query: 428 KYYEGV--RRLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 255 +YY+ + R +++ + +K +EL +L+D D+ G LLQIF+KP+ DRPTLF+E+IQR Sbjct: 276 QYYDNLEERLSKTNLIVKEDLKMIRELNILMDFDENGYLLQIFSKPLQDRPTLFIEIIQR 335
>HPPD_MYCGR (O42764) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 419 Score = 55.5 bits (132), Expect = 6e-08 Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 3/60 (5%) Frame = -3 Query: 425 YYEGVR---RLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 255 YYE +R + AG L E+ Q+L +L+D D+ G LLQ+FTKP+ DRPT+F+E+IQR Sbjct: 333 YYENMRLRLKAAGMKLEES-FDIIQKLNILIDFDEGGYLLQLFTKPLMDRPTVFIEIIQR 391
>HPPD_TETTH (Q27203) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) (F-antigen homolog) (TF-AG) Length = 404 Score = 54.3 bits (129), Expect = 1e-07 Identities = 31/61 (50%), Positives = 41/61 (67%), Gaps = 4/61 (6%) Frame = -3 Query: 425 YYEGVRRLAGDVLSEAQIKE----CQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQ 258 YY+ +R+ A + +KE Q+ +LVD D++G LLQIFTKPV DRPTLF E+IQ Sbjct: 309 YYDNLRK-ALTAQTSITVKEDLDVLQKNHILVDYDEKGYLLQIFTKPVEDRPTLFYEIIQ 367 Query: 257 R 255 R Sbjct: 368 R 368
>HPPD_NEUCR (Q872T7) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 412 Score = 53.9 bits (128), Expect = 2e-07 Identities = 27/61 (44%), Positives = 41/61 (67%), Gaps = 4/61 (6%) Frame = -3 Query: 425 YYEGVRRLAGDVLSEAQIKE----CQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQ 258 YY+ +R+ ++KE Q+L +L+D D+ G LLQ+FTKP+ DRPT+F+E+IQ Sbjct: 324 YYDTIRQRLKTEKRGWELKEDLDTIQKLNILIDYDEGGYLLQLFTKPLMDRPTVFIEIIQ 383 Query: 257 R 255 R Sbjct: 384 R 384
>HPPD2_ASPFU (Q4WPV8) Probable 4-hydroxyphenylpyruvate dioxygenase 2 (EC| 1.13.11.27) (4HPPD 2) (HPD 2) (HPPDase 2) Length = 406 Score = 50.8 bits (120), Expect = 1e-06 Identities = 30/59 (50%), Positives = 42/59 (71%), Gaps = 2/59 (3%) Frame = -3 Query: 425 YYEGVR-RLAGDVLS-EAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 255 YY +R RL+ L+ E I ++L +LVD D++G LLQIF+K V DRPT+F+E+IQR Sbjct: 320 YYSDLRQRLSHTGLTLEEDIAVLEKLHILVDFDEKGYLLQIFSKHVLDRPTVFIEVIQR 378
>HPPD1_ASPFU (Q4WHU1) Probable 4-hydroxyphenylpyruvate dioxygenase 1 (EC| 1.13.11.27) (4HPPD 1) (HPD 1) (HPPDase 1) Length = 403 Score = 49.7 bits (117), Expect = 3e-06 Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 3/60 (5%) Frame = -3 Query: 425 YYEGVR---RLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 255 YYE ++ + AG L E + + L +L+D D+ G LLQ+FTK + DRPT+F+E+IQR Sbjct: 316 YYEDIKVRLKKAGLTLHE-DFETIRSLDILIDFDEGGYLLQLFTKHLMDRPTVFIEIIQR 374
>HPPD_COCIM (Q00415) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (T-cell reactive protein) Length = 399 Score = 49.7 bits (117), Expect = 3e-06 Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 3/60 (5%) Frame = -3 Query: 425 YYEGVR---RLAGDVLSEAQIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQR 255 YYE ++ + G VL E + + L +L+D D+ G LLQ+FTK + DRPT+F+E+IQR Sbjct: 312 YYEDMKIRLKRQGLVLDE-DFETLKSLDILIDFDENGYLLQLFTKHLMDRPTVFIEIIQR 370
>HPPD_MAGGR (Q96X22) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) Length = 419 Score = 48.5 bits (114), Expect = 7e-06 Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 4/95 (4%) Frame = -3 Query: 425 YYEGVRRLAGDVLSEAQIKECQEL----GVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQ 258 YY+ +RR + +++E + +L+D D+ G LLQ+FT+P+ DRPT+F+E+IQ Sbjct: 331 YYDTMRRRLKTEKRDWELQEDFDRLVRNNILIDYDEGGYLLQLFTRPLMDRPTVFIEIIQ 390 Query: 257 RIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIE 153 R E D G GNF LF++IE Sbjct: 391 R---NEFDGFG------------AGNFKSLFEAIE 410
>MELA_SHECO (P23996) Protein melA| Length = 346 Score = 37.4 bits (85), Expect = 0.017 Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 1/95 (1%) Frame = -3 Query: 434 LPKYYEGVRRLAGDVLSEA-QIKECQELGVLVDRDDQGVLLQIFTKPVGDRPTLFLEMIQ 258 +P+YY+ + V + +IK Q +LVD D+ G LLQIFTK + +F+E+IQ Sbjct: 263 IPEYYDTIFEKLPQVTEDRDRIKHHQ---ILVDGDEDGYLLQIFTKNLFG--PIFIEIIQ 317 Query: 257 RIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIE 153 R K+ G GNF LF+SIE Sbjct: 318 R-----KNNLG----------FGEGNFKALFESIE 337
>Y090_SYNY3 (Q55810) Hypothetical protein slr0090| Length = 339 Score = 34.3 bits (77), Expect = 0.14 Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 2/81 (2%) Frame = -3 Query: 368 ECQELGVLVDRDDQG--VLLQIFTKPVGDRPTLFLEMIQRIGCMEKDERGEEYQXXXXXX 195 +C E+ +L D+D+ G +LLQIF++P TLF E+I+R + +G Sbjct: 272 QCLEI-LLDDQDNTGERLLLQIFSQPCYGVGTLFWEIIERRHRAKGFGQG---------- 320 Query: 194 XXXGNFSELFKSIEDYEKSLE 132 NF L++++E EK LE Sbjct: 321 ----NFQALYEAVETLEKQLE 337
>COHA1_MESAU (Q9JMH4) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1431 Score = 31.6 bits (70), Expect = 0.93 Identities = 15/29 (51%), Positives = 16/29 (55%) Frame = +2 Query: 323 PLGRPYRRAHPAPGIP*SAPPRGHPRQGV 409 PLG P R P P IP PRG P +GV Sbjct: 888 PLGPPGPRGPPGPSIPGPPGPRGPPGEGV 916
>VLLY_VIBVU (O06695) Hemolysin vllY| Length = 357 Score = 30.0 bits (66), Expect = 2.7 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 3/100 (3%) Frame = -3 Query: 440 PPLPKYYEGV-RRLAGDVLSEAQIKECQELGVLVDRDD--QGVLLQIFTKPVGDRPTLFL 270 P YY+ V R+ G + + ++L +L+D G+LLQIFT+ V +F Sbjct: 267 PTPDTYYDKVDSRVEGH---KEDVSRLRDLRILIDGAPLKDGILLQIFTQTV--IGPVFF 321 Query: 269 EMIQRIGCMEKDERGEEYQXXXXXXXXXGNFSELFKSIED 150 E+IQR G + GE GNF LF+SIE+ Sbjct: 322 EIIQRKG---NEGFGE------------GNFKALFESIEE 346
>ADRB3_CANFA (O02662) Beta-3 adrenergic receptor (Beta-3 adrenoceptor) (Beta-3| adrenoreceptor) Length = 405 Score = 29.3 bits (64), Expect = 4.6 Identities = 13/37 (35%), Positives = 22/37 (59%), Gaps = 2/37 (5%) Frame = -1 Query: 202 AAGSAKATSPS--CSSPLKITRSPLKPSNLLQFRDHR 98 AA +++ P+ C+SP + L+P+ LL R+HR Sbjct: 253 AASRSRSPGPARRCASPAAVPSDRLRPARLLPLREHR 289
>TKT1_CANAL (O94039) Transketolase 1 (EC 2.2.1.1) (TK 1)| Length = 677 Score = 28.9 bits (63), Expect = 6.0 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = +1 Query: 229 LSSFSMHPILWIISRNKVGLSPTG 300 LS+ S HP++W+ + + +GL G Sbjct: 452 LSALSHHPVIWVATHDSIGLGEDG 475
>ALP16_SCHPO (P87244) Spindle pole body component alp16 (Altered polarity| protein 16) Length = 759 Score = 28.9 bits (63), Expect = 6.0 Identities = 14/36 (38%), Positives = 20/36 (55%) Frame = -3 Query: 170 LFKSIEDYEKSLEAKQSAAVQGS*DRSWSLYHGLME 63 LF++ D+E S+E K + V + SWS Y G E Sbjct: 651 LFQAQSDFESSVELKDRSIVTKTTIMSWSKYQGTKE 686
>COHA1_MOUSE (Q07563) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen| 2) (180 kDa bullous pemphigoid antigen 2) Length = 1470 Score = 28.9 bits (63), Expect = 6.0 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = +2 Query: 323 PLGRPYRRAHPAPGIP*SAPPRGHPRQGV 409 P G P R P P IP PRG P +GV Sbjct: 891 PPGPPGPRGPPGPSIPGPPGPRGPPGEGV 919
>TKT1_KLULA (Q12630) Transketolase (EC 2.2.1.1) (TK)| Length = 679 Score = 28.5 bits (62), Expect = 7.9 Identities = 9/24 (37%), Positives = 16/24 (66%) Frame = +1 Query: 229 LSSFSMHPILWIISRNKVGLSPTG 300 LS+ S HP++W+ + + +GL G Sbjct: 454 LSALSGHPVIWVATHDSIGLGEDG 477 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,784,734 Number of Sequences: 219361 Number of extensions: 1158763 Number of successful extensions: 3652 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3423 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3637 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
