ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart33a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ000693.1|HVAJ693 Hordeum vulgare mRNA for 4-hydroxyphenylp... 880 0.0
2gb|BT009036.1| Triticum aestivum clone wdk4c.pk006.m9:fis, full ... 654 0.0
3gb|DQ139267.1| Triticum aestivum 4-hydroxyphenylpyruvate dioxyge... 585 e-164
4dbj|AK058890.1| Oryza sativa (japonica cultivar-group) cDNA clon... 309 4e-81
5ref|XM_464255.1| Oryza sativa (japonica cultivar-group), mRNA 307 2e-80
6dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
7dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
8dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic D... 180 3e-42
9gb|AF251065.1|AF251065 Oryza sativa 4-hydroxyphenylpyruvate diox... 119 8e-24
10gb|U87257.1|DCU87257 Daucus carota 4-hydroxyphenylpyruvate dioxy... 84 4e-13
11ref|NM_100536.2| Arabidopsis thaliana PDS1 (PHYTOENE DESATURATIO... 74 4e-10
12ref|NM_100535.3| Arabidopsis thaliana RNA binding AT1G06560 mRNA... 74 4e-10
13gb|AY136294.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate diox... 74 4e-10
14gb|AY128745.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate diox... 74 4e-10
15gb|AY072329.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate diox... 74 4e-10
16gb|AF428446.1|AF428446 Arabidopsis thaliana At1g06570/F12K11_12 ... 74 4e-10
17emb|BX813446.1|CNS0AAQO Arabidopsis thaliana Full-length cDNA Co... 74 4e-10
18gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana... 74 4e-10
19gb|AF047834.1|AF047834 Arabidopsis thaliana 4-hydroxyphenylpyruv... 74 4e-10
20gb|U89267.1|ATU89267 Arabidopsis thaliana p-hydroxyphenylpyruvat... 74 4e-10
21gb|AF000228.1|ATAF000228 Arabidopsis thaliana p-hydroxyphenylpyr... 74 4e-10
22gb|AF060481.1|AF060481 Arabidopsis thaliana p-hydroxyphenylpyruv... 56 1e-04
23gb|AY957391.1| Medicago truncatula 4-hydroxyphenylpyruvate dioxy... 48 0.025
24emb|AJ431261.1|CRE431261 Chlamydomonas reinhardtii partial mRNA ... 46 0.098
25emb|CR388417.12| Zebrafish DNA sequence from clone DKEY-211M6 in... 46 0.098
26gb|AY277796.1| Dasyatis sayi renal urea transporter strUT-2 mRNA... 44 0.39
27gb|AY277795.1| Dasyatis sabina renal urea transporter strUT-2c m... 44 0.39
28gb|AY277794.1| Dasyatis sabina renal urea transporter strUT-2 mR... 44 0.39
29gb|AY277793.1| Dasyatis sabina renal urea transporter strUT-1 mR... 44 0.39
30gb|AF503513.1| Dasyatis sabina urea tranporter 2 (strUT-2a) mRNA... 44 0.39
31gb|AC021037.6| Homo sapiens chromosome 10 clone RP11-44D15, comp... 44 0.39
32gb|AF443781.2| Dasyatis sabina kidney urea transporter 1 (strUT-... 44 0.39
33gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, comp... 42 1.5
34gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
35emb|BX908756.12| Zebrafish DNA sequence from clone CH211-190D13 ... 42 1.5
36gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, compl... 42 1.5
37emb|AL022163.1|HS551E13 Human DNA sequence from clone RP4-551E13... 42 1.5
38ref|NM_135090.2| Drosophila melanogaster CG7277-RA (CG7277), mRNA 42 1.5
39gb|AY058443.1| Drosophila melanogaster GH22740 full length cDNA 42 1.5
40gb|AC021863.5|AC021863 Homo sapiens BAC clone RP11-689K5 from 4,... 42 1.5
41dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
42dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
43gb|AC011063.8|AC011063 Drosophila melanogaster, chromosome 2L, r... 42 1.5
44gb|AC009910.5|AC009910 Drosophila melanogaster, chromosome 2L, r... 42 1.5
45gb|AC110078.2| Homo sapiens BAC clone RP11-358N5 from 2, complet... 42 1.5
46gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
47dbj|AB007644.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.5
48gb|AF123487.1|AF123487 Jerry Slough virus polyprotein mRNA, comp... 42 1.5
49gb|U88058.1|JCU88058 Jamestown Canyon virus M segment polyprotei... 42 1.5
50gb|AE003610.3| Drosophila melanogaster chromosome 2L, section 19... 42 1.5
51emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in... 42 1.5
52emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4,... 42 1.5
53gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, c... 42 1.5
54gb|AY351210.1| Paramunida pictura Fo156 16S ribosomal RNA gene, ... 40 6.0
55gb|AY351209.1| Paramunida pictura Fo155 16S ribosomal RNA gene, ... 40 6.0
56gb|AY351208.1| Paramunida pictura Fo177 16S ribosomal RNA gene, ... 40 6.0
57gb|AY351207.1| Paramunida pictura Fo176 16S ribosomal RNA gene, ... 40 6.0
58gb|AY351202.1| Paramunida labis Fo151 16S ribosomal RNA gene, pa... 40 6.0
59gb|AY351201.1| Paramunida labis Fo64 16S ribosomal RNA gene, par... 40 6.0
60gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 6.0
61gb|AF474718.1| Pygoscelis adeliae isolate S31 mitochondrial cont... 40 6.0
62gb|AF474661.1| Pygoscelis adeliae isolate D201 mitochondrial con... 40 6.0
63gb|AF474657.1| Pygoscelis adeliae isolate D12 mitochondrial cont... 40 6.0
64gb|AF474654.1| Pygoscelis adeliae isolate Cm67 mitochondrial con... 40 6.0
65gb|AF474545.1| Pygoscelis adeliae isolate D103 mitochondrial con... 40 6.0
66emb|CR774195.4| Zebrafish DNA sequence from clone DKEY-73P2 in l... 40 6.0
67gb|AF188024.3| Homo sapiens chromosome 12 clone CTC-790L10 map 1... 40 6.0
68gb|AF474886.1| Pygoscelis adeliae isolate PE10.Bird.481 mitochon... 40 6.0
69gb|AF474875.1| Pygoscelis adeliae isolate PE30.Cro.446 mitochond... 40 6.0
70gb|AF474874.1| Pygoscelis adeliae isolate PE31.Bird.481 mitochon... 40 6.0
71gb|AF474809.1| Pygoscelis adeliae isolate PE132.Cro.523 mitochon... 40 6.0
72gb|AF474808.1| Pygoscelis adeliae isolate PE135.Edmo.1086 mitoch... 40 6.0
73gb|AF474802.1| Pygoscelis adeliae isolate PE151.Inexp.5706 mitoc... 40 6.0
74gb|AF474800.1| Pygoscelis adeliae isolate PE162.Foot.5488 mitoch... 40 6.0
75emb|AL928657.21| Zebrafish DNA sequence from clone CH211-194I10 ... 40 6.0
76emb|BX511184.11| Zebrafish DNA sequence from clone DKEY-103A3 in... 40 6.0
77emb|BX511153.9| Zebrafish DNA sequence from clone DKEYP-66D1 in ... 40 6.0
78gb|AC026330.12| Homo sapiens 3 BAC RP11-414D23 (Roswell Park Can... 40 6.0
79gb|AC068629.35| Homo sapiens 12 BAC RP11-162A11 (Roswell Park Ca... 40 6.0
80gb|AC022363.24| Homo sapiens 12 BAC RP11-1151B7 (Roswell Park Ca... 40 6.0
81gb|AC114488.3| Homo sapiens chromosome 1 clone RP11-73M7, comple... 40 6.0
82gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete... 40 6.0
83emb|BX247945.6| Zebrafish DNA sequence from clone CH211-209L14 i... 40 6.0
84emb|AJ309203.1|CBL309203 Coleus blumei mRNA for 4-hydroxyphenylp... 40 6.0
85emb|BX005185.5| Zebrafish DNA sequence from clone CH211-132N11 i... 40 6.0
86emb|AL831746.5| Mouse DNA sequence from clone RP23-67O11 on chro... 40 6.0
87emb|AJ012046.1|AWI012046 Acomys wilsoni partial mitochondrial DN... 40 6.0 
>emb|AJ000693.1|HVAJ693 Hordeum vulgare mRNA for 4-hydroxyphenylpyruvate dioxygenase
          Length = 1565

 Score =  880 bits (444), Expect = 0.0
 Identities = 447/448 (99%)
 Strand = Plus / Minus

                                                                        
Query: 1    caccaattataacattgatataattgggcgacgcatattacaaacaacattgttttcttt 60
            |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1411 caccaattataacattgatataattgtgcgacgcatattacaaacaacattgttttcttt 1352

                                                                        
Query: 61   tgctccatgagaccatgatacaaggaccagcttctatcctatgatccctgaactgcagca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1351 tgctccatgagaccatgatacaaggaccagcttctatcctatgatccctgaactgcagca 1292

                                                                        
Query: 121  gattgcttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaag 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1291 gattgcttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaag 1232

                                                                        
Query: 181  ttgcctttgccgaacccgccgcagccacccttctggtactcttcccctctctcgtccttc 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1231 ttgcctttgccgaacccgccgcagccacccttctggtactcttcccctctctcgtccttc 1172

                                                                        
Query: 241  tccatgcacccgatcctctggatcatctccaggaacaaggtcggcctgtcccctactggc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 tccatgcacccgatcctctggatcatctccaggaacaaggtcggcctgtcccctactggc 1112

                                                                        
Query: 301  ttggtgaagatttggagcaacaccccttggtcgtccctatcgacgagcacacccagctcc 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1111 ttggtgaagatttggagcaacaccccttggtcgtccctatcgacgagcacacccagctcc 1052

                                                                        
Query: 361  tggcattccttgatctgcgcctccgagaggacatccccggcaaggcgtcgcacgccttcg 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 tggcattccttgatctgcgcctccgagaggacatccccggcaaggcgtcgcacgccttcg 992

                                        
Query: 421  tagtacttcggcagcgggggtggcagga 448
            ||||||||||||||||||||||||||||
Sbjct: 991  tagtacttcggcagcgggggtggcagga 964
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>gb|BT009036.1| Triticum aestivum clone wdk4c.pk006.m9:fis, full insert mRNA sequence
          Length = 1614

 Score =  654 bits (330), Expect = 0.0
 Identities = 354/362 (97%)
 Strand = Plus / Minus

                                                                        
Query: 87   ccagcttctatcctatgatccctgaactgcagcagattgcttggcttcaagggacttctc 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 ccagcttctatcctatgatccctgaactgcagcagattgcttggcttcaagggacttctc 1281

                                                                        
Query: 147  gtaatcttcaatggacttgaacagctcggagaagttgcctttgccgaacccgccgcagcc 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1280 gtaatcttcaatggacttgaacagctcggagaagttgcctttgccgaacccgccgcagcc 1221

                                                                        
Query: 207  acccttctggtactcttcccctctctcgtccttctccatgcacccgatcctctggatcat 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1220 acccttctggtactcttcccctctctcgtccttctccatgcacccgatcctctggatcat 1161

                                                                        
Query: 267  ctccaggaacaaggtcggcctgtcccctactggcttggtgaagatttggagcaacacccc 326
            |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1160 ctccaggaacaacgtcggcctgtcccctactggcttggtgaagatttgtagcaacacccc 1101

                                                                        
Query: 327  ttggtcgtccctatcgacgagcacacccagctcctggcattccttgatctgcgcctccga 386
            |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1100 ttggtcgtccctgtcgacgagcacccccagctcctggcattccttgatctgcgcctccga 1041

                                                                        
Query: 387  gaggacatccccggcaaggcgtcgcacgccttcgtagtacttcggcagcgggggtggcag 446
            ||| ||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1040 gagcacatccccggcgatgcgccgcacgccttcgtagtacttcggcagcgggggtggcag 981

              
Query: 447  ga 448
            ||
Sbjct: 980  ga 979



 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 75/84 (89%), Gaps = 2/84 (2%)
 Strand = Plus / Minus

                                                                        
Query: 1    caccaattataacattg-atataattgggcgacgcatattacaaacaacattgttttctt 59
            ||||||||||||||| | | ||||||| ||| ||||| |||||||||||||  |||||||
Sbjct: 1447 caccaattataacatcggacataattgcgcgccgcatcttacaaacaacatcattttctt 1388

                                    
Query: 60   ttgctccatgagaccatgatacaa 83
            ||||||||||||||| ||||||||
Sbjct: 1387 ttgctccatgagacc-tgatacaa 1365
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>gb|DQ139267.1| Triticum aestivum 4-hydroxyphenylpyruvate dioxygenase mRNA, complete
            cds
          Length = 1588

 Score =  585 bits (295), Expect = e-164
 Identities = 348/363 (95%), Gaps = 2/363 (0%)
 Strand = Plus / Minus

                                                                        
Query: 87   ccagcttctatcctatgatccctgaactgcagcagattgcttggcttcaagggacttctc 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1341 ccagcttctatcctatgatccctgaactgcagcagattgcttggcttcaagggacttctc 1282

                                                                        
Query: 147  gtaatcttcaatggacttgaacagctcggagaagttgcctttgccgaacccgccgcagcc 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 gtaatcttcaatggacttgaacagctcggagaagttgcctttgccgaacccgccgcagcc 1222

                                                                        
Query: 207  acccttctggtactcttcccctctctcgtccttctccatgcacccgatcctctggatcat 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 1221 acccttctggtactcttcccctctctcgtccttctccatgcacccgatcctttggatcat 1162

                                                                        
Query: 267  ctccaggaacaaggtcggcctgtcccctactggcttggtgaagatttggagcaacacccc 326
            |||||||||||  || ||||||||||| |||||||| ||||||||||| |||||||||||
Sbjct: 1161 ctccaggaacagcgttggcctgtcccccactggctttgtgaagatttgtagcaacacccc 1102

                                                                        
Query: 327  ttggtcgtccctatcgacgagcacacccagctcctggcattccttgatctgcgcctccga 386
            |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1101 ttggtcgtccctgtcgacgagcacccccagctcctggcattccttgatctgcgcctccga 1042

                                                                        
Query: 387  gaggacatccccggcaaggcgtcgcacgccttcgtagtac-ttcggcagcgggggtggca 445
            ||| ||||||||||| | ||| |||||||||||||||||| ||||||||| |||||||||
Sbjct: 1041 gagcacatccccggcgatgcgccgcacgccttcgtagtactttcggcagc-ggggtggca 983

               
Query: 446  gga 448
            |||
Sbjct: 982  gga 980



 Score = 89.7 bits (45), Expect = 7e-15
 Identities = 70/77 (90%), Gaps = 1/77 (1%)
 Strand = Plus / Minus

                                                                        
Query: 8    tataacat-tgatataattgggcgacgcatattacaaacaacattgttttcttttgctcc 66
            |||||||| ||||| ||||| ||| ||||| ||||||||||||| |||||||||||||||
Sbjct: 1442 tataacatctgatacaattgcgcgccgcatcttacaaacaacatagttttcttttgctcc 1383

                             
Query: 67   atgagaccatgatacaa 83
            | |||||||||||||||
Sbjct: 1382 aggagaccatgatacaa 1366
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>dbj|AK058890.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-D10, full
           insert sequence
          Length = 985

 Score =  309 bits (156), Expect = 4e-81
 Identities = 285/328 (86%)
 Strand = Plus / Minus

                                                                       
Query: 98  cctatgatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaa 157
           |||| ||||| ||||||| ||  | |||||||||||||||||| ||||| || || ||||
Sbjct: 722 cctaggatccttgaactgtaggggcttgcttggcttcaagggatttctcatactcctcaa 663

                                                                       
Query: 158 tggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggt 217
           |||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 662 tggacttgaacagctccgagaagttgcccttcccaaacccgccgcagccgcccttctggt 603

                                                                       
Query: 218 actcttcccctctctcgtccttctccatgcacccgatcctctggatcatctccaggaaca 277
           |||| | ||| ||||| ||||||||||||||||| ||||| || |||||||||| ||| |
Sbjct: 602 actcctgcccactctcatccttctccatgcacccaatcctttgtatcatctccaagaaaa 543

                                                                       
Query: 278 aggtcggcctgtcccctactggcttggtgaagatttggagcaacaccccttggtcgtccc 337
           |||| |||||||| |||||||||||||||||||| |||||||||||||| ||||| ||||
Sbjct: 542 aggttggcctgtctcctactggcttggtgaagatctggagcaacaccccctggtcatccc 483

                                                                       
Query: 338 tatcgacgagcacacccagctcctggcattccttgatctgcgcctccgagaggacatccc 397
           | || |||||||| || ||||||||||| || ||||||||| |||||||||| || ||||
Sbjct: 482 tgtccacgagcaccccgagctcctggcactcgttgatctgctcctccgagagcacgtccc 423

                                       
Query: 398 cggcaaggcgtcgcacgccttcgtagta 425
           ||||  | || |||||||| ||||||||
Sbjct: 422 cggcgcgccgccgcacgccgtcgtagta 395
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>ref|XM_464255.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1341

 Score =  307 bits (155), Expect = 2e-80
 Identities = 266/303 (87%)
 Strand = Plus / Minus

                                                                        
Query: 123  ttgcttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagtt 182
            |||||||||||||||||| ||||| || || |||||||||||||||||||| ||||||||
Sbjct: 1317 ttgcttggcttcaagggatttctcatactcctcaatggacttgaacagctccgagaagtt 1258

                                                                        
Query: 183  gcctttgccgaacccgccgcagccacccttctggtactcttcccctctctcgtccttctc 242
            ||| || || |||||||||||||| |||||||||||||| | ||| ||||| ||||||||
Sbjct: 1257 gcccttcccaaacccgccgcagccgcccttctggtactcctgcccactctcatccttctc 1198

                                                                        
Query: 243  catgcacccgatcctctggatcatctccaggaacaaggtcggcctgtcccctactggctt 302
            ||||||||| ||||| || |||||||||| ||| ||||| |||||||| |||||||||||
Sbjct: 1197 catgcacccaatcctttgtatcatctccaagaaaaaggttggcctgtctcctactggctt 1138

                                                                        
Query: 303  ggtgaagatttggagcaacaccccttggtcgtccctatcgacgagcacacccagctcctg 362
            ||||||||| |||||||||||||| ||||| ||||| || |||||||| || ||||||||
Sbjct: 1137 ggtgaagatctggagcaacaccccctggtcatccctgtccacgagcaccccgagctcctg 1078

                                                                        
Query: 363  gcattccttgatctgcgcctccgagaggacatccccggcaaggcgtcgcacgccttcgta 422
            ||| || ||||||||| |||||||||| || ||||||||  | || |||||||| |||||
Sbjct: 1077 gcactcgttgatctgctcctccgagagcacgtccccggcgcgccgccgcacgccgtcgta 1018

               
Query: 423  gta 425
            |||
Sbjct: 1017 gta 1015
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  180 bits (91), Expect = 3e-42
 Identities = 166/191 (86%)
 Strand = Plus / Plus

                                                                           
Query: 98      cctatgatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaa 157
               |||| ||||| ||||||| ||  | |||||||||||||||||| ||||| || || ||||
Sbjct: 3677785 cctaggatccttgaactgtaggggcttgcttggcttcaagggatttctcatactcctcaa 3677844

                                                                           
Query: 158     tggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggt 217
               |||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 3677845 tggacttgaacagctccgagaagttgcccttcccaaacccgccgcagccgcccttctggt 3677904

                                                                           
Query: 218     actcttcccctctctcgtccttctccatgcacccgatcctctggatcatctccaggaaca 277
               |||| | ||| ||||| ||||||||||||||||| ||||| || |||||||||| ||| |
Sbjct: 3677905 actcctgcccactctcatccttctccatgcacccaatcctttgtatcatctccaagaaaa 3677964

                          
Query: 278     aggtcggcctg 288
               |||| ||||||
Sbjct: 3677965 aggttggcctg 3677975



 Score =  137 bits (69), Expect = 3e-29
 Identities = 123/141 (87%)
 Strand = Plus / Plus

                                                                           
Query: 285     cctgtcccctactggcttggtgaagatttggagcaacaccccttggtcgtccctatcgac 344
               |||||| |||||||||||||||||||| |||||||||||||| ||||| ||||| || ||
Sbjct: 3678730 cctgtctcctactggcttggtgaagatctggagcaacaccccctggtcatccctgtccac 3678789

                                                                           
Query: 345     gagcacacccagctcctggcattccttgatctgcgcctccgagaggacatccccggcaag 404
               |||||| || ||||||||||| || ||||||||| |||||||||| || ||||||||  |
Sbjct: 3678790 gagcaccccgagctcctggcactcgttgatctgctcctccgagagcacgtccccggcgcg 3678849

                                    
Query: 405     gcgtcgcacgccttcgtagta 425
                || |||||||| ||||||||
Sbjct: 3678850 ccgccgcacgccgtcgtagta 3678870
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>dbj|AP005071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0669G09
          Length = 140067

 Score =  180 bits (91), Expect = 3e-42
 Identities = 166/191 (86%)
 Strand = Plus / Plus

                                                                         
Query: 98    cctatgatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaa 157
             |||| ||||| ||||||| ||  | |||||||||||||||||| ||||| || || ||||
Sbjct: 18102 cctaggatccttgaactgtaggggcttgcttggcttcaagggatttctcatactcctcaa 18161

                                                                         
Query: 158   tggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggt 217
             |||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 18162 tggacttgaacagctccgagaagttgcccttcccaaacccgccgcagccgcccttctggt 18221

                                                                         
Query: 218   actcttcccctctctcgtccttctccatgcacccgatcctctggatcatctccaggaaca 277
             |||| | ||| ||||| ||||||||||||||||| ||||| || |||||||||| ||| |
Sbjct: 18222 actcctgcccactctcatccttctccatgcacccaatcctttgtatcatctccaagaaaa 18281

                        
Query: 278   aggtcggcctg 288
             |||| ||||||
Sbjct: 18282 aggttggcctg 18292



 Score =  137 bits (69), Expect = 3e-29
 Identities = 123/141 (87%)
 Strand = Plus / Plus

                                                                         
Query: 285   cctgtcccctactggcttggtgaagatttggagcaacaccccttggtcgtccctatcgac 344
             |||||| |||||||||||||||||||| |||||||||||||| ||||| ||||| || ||
Sbjct: 19047 cctgtctcctactggcttggtgaagatctggagcaacaccccctggtcatccctgtccac 19106

                                                                         
Query: 345   gagcacacccagctcctggcattccttgatctgcgcctccgagaggacatccccggcaag 404
             |||||| || ||||||||||| || ||||||||| |||||||||| || ||||||||  |
Sbjct: 19107 gagcaccccgagctcctggcactcgttgatctgctcctccgagagcacgtccccggcgcg 19166

                                  
Query: 405   gcgtcgcacgccttcgtagta 425
              || |||||||| ||||||||
Sbjct: 19167 ccgccgcacgccgtcgtagta 19187
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>dbj|AP005804.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0085K21
          Length = 180714

 Score =  180 bits (91), Expect = 3e-42
 Identities = 166/191 (86%)
 Strand = Plus / Plus

                                                                          
Query: 98     cctatgatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaa 157
              |||| ||||| ||||||| ||  | |||||||||||||||||| ||||| || || ||||
Sbjct: 159075 cctaggatccttgaactgtaggggcttgcttggcttcaagggatttctcatactcctcaa 159134

                                                                          
Query: 158    tggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggt 217
              |||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 159135 tggacttgaacagctccgagaagttgcccttcccaaacccgccgcagccgcccttctggt 159194

                                                                          
Query: 218    actcttcccctctctcgtccttctccatgcacccgatcctctggatcatctccaggaaca 277
              |||| | ||| ||||| ||||||||||||||||| ||||| || |||||||||| ||| |
Sbjct: 159195 actcctgcccactctcatccttctccatgcacccaatcctttgtatcatctccaagaaaa 159254

                         
Query: 278    aggtcggcctg 288
              |||| ||||||
Sbjct: 159255 aggttggcctg 159265



 Score =  137 bits (69), Expect = 3e-29
 Identities = 123/141 (87%)
 Strand = Plus / Plus

                                                                          
Query: 285    cctgtcccctactggcttggtgaagatttggagcaacaccccttggtcgtccctatcgac 344
              |||||| |||||||||||||||||||| |||||||||||||| ||||| ||||| || ||
Sbjct: 160020 cctgtctcctactggcttggtgaagatctggagcaacaccccctggtcatccctgtccac 160079

                                                                          
Query: 345    gagcacacccagctcctggcattccttgatctgcgcctccgagaggacatccccggcaag 404
              |||||| || ||||||||||| || ||||||||| |||||||||| || ||||||||  |
Sbjct: 160080 gagcaccccgagctcctggcactcgttgatctgctcctccgagagcacgtccccggcgcg 160139

                                   
Query: 405    gcgtcgcacgccttcgtagta 425
               || |||||||| ||||||||
Sbjct: 160140 ccgccgcacgccgtcgtagta 160160
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>gb|AF251065.1|AF251065 Oryza sativa 4-hydroxyphenylpyruvate dioxygenase mRNA, partial cds
          Length = 264

 Score =  119 bits (60), Expect = 8e-24
 Identities = 105/120 (87%)
 Strand = Plus / Minus

                                                                       
Query: 98  cctatgatccctgaactgcagcagattgcttggcttcaagggacttctcgtaatcttcaa 157
           |||| ||||| ||||||| ||  | |||||||||||||||||| ||||| || || ||||
Sbjct: 120 cctaggatccttgaactgtaggggcttgcttggcttcaagggatttctcatactcctcaa 61

                                                                       
Query: 158 tggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccacccttctggt 217
           |||||||||||||||| ||||||||||| || || |||||||||||||| ||||||||||
Sbjct: 60  tggacttgaacagctccgagaagttgcccttcccaaacccgccgcagccgcccttctggt 1
to top
>gb|U87257.1|DCU87257 Daucus carota 4-hydroxyphenylpyruvate dioxygenase mRNA, complete cds
          Length = 1684

 Score = 83.8 bits (42), Expect = 4e-13
 Identities = 138/170 (81%)
 Strand = Plus / Minus

                                                                        
Query: 151  tcttcaatggacttgaacagctcggagaagttgcctttgccgaacccgccgcagccaccc 210
            ||||| ||||||||||||||||| |||||||| || || || || || ||||| || |||
Sbjct: 1376 tcttcgatggacttgaacagctctgagaagttccccttcccaaatcctccgcacccgccc 1317

                                                                        
Query: 211  ttctggtactcttcccctctctcgtccttctccatgcacccgatcctctggatcatctcc 270
            |||||||||   | ||||   ||||||||   ||||||||| | |||||| || ||||| 
Sbjct: 1316 ttctggtacatctgccctgcatcgtccttgagcatgcaccctaccctctgaatgatctct 1257

                                                              
Query: 271  aggaacaaggtcggcctgtcccctactggcttggtgaagatttggagcaa 320
            | ||| ||||| |||||||| ||||| |||||||| |||||||| |||||
Sbjct: 1256 atgaataaggtaggcctgtcacctacaggcttggtaaagatttgaagcaa 1207
to top
>ref|NM_100536.2| Arabidopsis thaliana PDS1 (PHYTOENE DESATURATION 1) AT1G06570 (PDS1)
            mRNA, complete cds
          Length = 1553

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 127  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 186
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1408 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1349

                 
Query: 187  ttgcc 191
            |||||
Sbjct: 1348 ttgcc 1344



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 280  gtcggcctgtcccctactggcttggtgaagatttggagcaac 321
            ||||||||||| |||| ||| || ||||||||||| ||||||
Sbjct: 1255 gtcggcctgtcacctagtggttttgtgaagatttgaagcaac 1214
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>ref|NM_100535.3| Arabidopsis thaliana RNA binding AT1G06560 mRNA, complete cds
          Length = 2207

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                        
Query: 127  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 186
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 2037 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 2096

                 
Query: 187  ttgcc 191
            |||||
Sbjct: 2097 ttgcc 2101
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>gb|AY136294.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate dioxygenase HPD
            (At1g06570) mRNA, complete cds
          Length = 1510

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 127  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 186
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1408 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1349

                 
Query: 187  ttgcc 191
            |||||
Sbjct: 1348 ttgcc 1344



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 280  gtcggcctgtcccctactggcttggtgaagatttggagcaac 321
            ||||||||||| |||| ||| || ||||||||||| ||||||
Sbjct: 1255 gtcggcctgtcacctagtggttttgtgaagatttgaagcaac 1214
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>gb|AY128745.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate dioxygenase (HPD)
            (At1g06570) mRNA, complete cds
          Length = 1367

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 127  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 186
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1322 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1263

                 
Query: 187  ttgcc 191
            |||||
Sbjct: 1262 ttgcc 1258



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 280  gtcggcctgtcccctactggcttggtgaagatttggagcaac 321
            ||||||||||| |||| ||| || ||||||||||| ||||||
Sbjct: 1169 gtcggcctgtcacctagtggttttgtgaagatttgaagcaac 1128
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>gb|AY072329.1| Arabidopsis thaliana 4-hydroxyphenylpyruvate dioxygenase (HPD)
            (At1g06570) mRNA, complete cds
          Length = 1494

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 127  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 186
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1377 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1318

                 
Query: 187  ttgcc 191
            |||||
Sbjct: 1317 ttgcc 1313



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 280  gtcggcctgtcccctactggcttggtgaagatttggagcaac 321
            ||||||||||| |||| ||| || ||||||||||| ||||||
Sbjct: 1224 gtcggcctgtcacctagtggttttgtgaagatttgaagcaac 1183
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>gb|AF428446.1|AF428446 Arabidopsis thaliana At1g06570/F12K11_12 mRNA, complete cds
          Length = 1525

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 127  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 186
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1370 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1311

                 
Query: 187  ttgcc 191
            |||||
Sbjct: 1310 ttgcc 1306



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 280  gtcggcctgtcccctactggcttggtgaagatttggagcaac 321
            ||||||||||| |||| ||| || ||||||||||| ||||||
Sbjct: 1217 gtcggcctgtcacctagtggttttgtgaagatttgaagcaac 1176
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>emb|BX813446.1|CNS0AAQO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB17ZH11 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1427

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 127  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 186
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1347 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1288

                 
Query: 187  ttgcc 191
            |||||
Sbjct: 1287 ttgcc 1283
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>gb|AC007592.4|AC007592 Genomic sequence for Arabidopsis thaliana BAC F12K11 from chromosome I,
             complete sequence
          Length = 93724

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                         
Query: 127   ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 186
             ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 41979 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 41920

                  
Query: 187   ttgcc 191
             |||||
Sbjct: 41919 ttgcc 41915
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>gb|AF047834.1|AF047834 Arabidopsis thaliana 4-hydroxyphenylpyruvate dioxygenase mRNA,
            complete cds
          Length = 1508

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 127  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 186
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1345 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1286

                 
Query: 187  ttgcc 191
            |||||
Sbjct: 1285 ttgcc 1281



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 280  gtcggcctgtcccctactggcttggtgaagatttggagcaac 321
            ||||||||||| |||| ||| || ||||||||||| ||||||
Sbjct: 1192 gtcggcctgtcacctagtggttttgtgaagatttgaagcaac 1151
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>gb|U89267.1|ATU89267 Arabidopsis thaliana p-hydroxyphenylpyruvate dioxygenase (HPD) mRNA,
            complete cds
          Length = 1449

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 127  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 186
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1330 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1271

                 
Query: 187  ttgcc 191
            |||||
Sbjct: 1270 ttgcc 1266



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 280  gtcggcctgtcccctactggcttggtgaagatttggagcaac 321
            ||||||||||| |||| ||| || ||||||||||| ||||||
Sbjct: 1177 gtcggcctgtcacctagtggttttgtgaagatttgaagcaac 1136
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>gb|AF000228.1|ATAF000228 Arabidopsis thaliana p-hydroxyphenylpyruvate dioxygenase mRNA,
            complete cds. ~~~~~~~~~~
          Length = 1519

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 127  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggagaagttgcct 186
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct: 1358 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagagaaattgcct 1299

                 
Query: 187  ttgcc 191
            |||||
Sbjct: 1298 ttgcc 1294



 Score = 44.1 bits (22), Expect = 0.39
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                      
Query: 280  gtcggcctgtcccctactggcttggtgaagatttggagcaac 321
            ||||||||||| |||| ||| || ||||||||||| ||||||
Sbjct: 1205 gtcggcctgtcacctagtggttttgtgaagatttgaagcaac 1164
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>gb|AF060481.1|AF060481 Arabidopsis thaliana p-hydroxyphenylpyruvate dioxygenase (pds1) gene,
            complete cds
          Length = 1534

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 46/52 (88%)
 Strand = Plus / Minus

                                                                
Query: 127  ttggcttcaagggacttctcgtaatcttcaatggacttgaacagctcggaga 178
            ||||||||||| | ||| ||||| ||||||||||||||||| ||||| ||||
Sbjct: 1439 ttggcttcaagagtcttttcgtattcttcaatggacttgaagagctcagaga 1388
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>gb|AY957391.1| Medicago truncatula 4-hydroxyphenylpyruvate dioxygenase (HPD) mRNA,
            complete cds
          Length = 1630

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 141  cttctcgtaatcttcaatggacttgaacagctcggagaagttgccttt 188
            |||||| || ||||||||||| ||||| ||||| |||||||| |||||
Sbjct: 1317 cttctcatactcttcaatggatttgaaaagctccgagaagtttccttt 1270
to top
>emb|AJ431261.1|CRE431261 Chlamydomonas reinhardtii partial mRNA for p-hydroxyphenylpyruvate
            dioxigenase (hppd1 gene)
          Length = 1865

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 177  gaagttgcctttgccgaacccgccgcagcca 207
            |||||||||||| ||||| ||||||||||||
Sbjct: 1366 gaagttgcctttcccgaagccgccgcagcca 1336
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>emb|CR388417.12| Zebrafish DNA sequence from clone DKEY-211M6 in linkage group 24,
             complete sequence
          Length = 111236

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 219   ctcttcccctctctcgtccttctccat 245
             ||||||| |||||||||||||||||||
Sbjct: 31571 ctcttcctctctctcgtccttctccat 31597
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>gb|AY277796.1| Dasyatis sayi renal urea transporter strUT-2 mRNA, complete cds
          Length = 1683

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 49 attgttttcttttgctccatga 70
          ||||||||||||||||||||||
Sbjct: 92 attgttttcttttgctccatga 71
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>gb|AY277795.1| Dasyatis sabina renal urea transporter strUT-2c mRNA, complete
          cds, alternatively spliced
          Length = 5179

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 49 attgttttcttttgctccatga 70
          ||||||||||||||||||||||
Sbjct: 92 attgttttcttttgctccatga 71
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>gb|AY277794.1| Dasyatis sabina renal urea transporter strUT-2 mRNA, complete
          cds, alternatively spliced
          Length = 3850

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 49 attgttttcttttgctccatga 70
          ||||||||||||||||||||||
Sbjct: 92 attgttttcttttgctccatga 71
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>gb|AY277793.1| Dasyatis sabina renal urea transporter strUT-1 mRNA, complete
          cds, alternatively spliced
          Length = 1509

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 49 attgttttcttttgctccatga 70
          ||||||||||||||||||||||
Sbjct: 92 attgttttcttttgctccatga 71
to top
>gb|AF503513.1| Dasyatis sabina urea tranporter 2 (strUT-2a) mRNA, complete cds
          Length = 3642

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 49 attgttttcttttgctccatga 70
          ||||||||||||||||||||||
Sbjct: 92 attgttttcttttgctccatga 71
to top
>gb|AC021037.6| Homo sapiens chromosome 10 clone RP11-44D15, complete sequence
          Length = 179918

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 7      ttataacattgatataattggg 28
              ||||||||||||||||||||||
Sbjct: 101809 ttataacattgatataattggg 101830
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>gb|AF443781.2| Dasyatis sabina kidney urea transporter 1 (strUT-1b) mRNA,
          complete cds
          Length = 2660

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 49 attgttttcttttgctccatga 70
          ||||||||||||||||||||||
Sbjct: 92 attgttttcttttgctccatga 71
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>gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, complete sequence
          Length = 214765

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 219    ctcttcccctctctcgtccttctcc 243
              ||||||||||||||| |||||||||
Sbjct: 173127 ctcttcccctctctcttccttctcc 173151
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 285     cctgtcccctactggcttggtgaagatttggag 317
               |||||| || ||||||||||| |||||||||||
Sbjct: 6186116 cctgtctcccactggcttggttaagatttggag 6186084
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>emb|BX908756.12| Zebrafish DNA sequence from clone CH211-190D13 in linkage group 1,
              complete sequence
          Length = 134952

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 266    tctccaggaacaaggtcggcc 286
              |||||||||||||||||||||
Sbjct: 117862 tctccaggaacaaggtcggcc 117882
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>gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, complete sequence
          Length = 139884

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 219   ctcttcccctctctcgtccttctcc 243
             ||||||||||||||| |||||||||
Sbjct: 84976 ctcttcccctctctcttccttctcc 85000
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>emb|AL022163.1|HS551E13 Human DNA sequence from clone RP4-551E13 on chromosome Xp11.2-11.3
             Contains the 3' end of a novel gene (MGC51029), a farnesyl
             diphosphate synthase (farnesyl pyrophosphate synthetase
             dimethylallyltranstransferase geranyltranstransferase)
             (FDPS) pseudogene and a ubinuclein 1 (UBN1) pseudogene,
             complete sequence
          Length = 107418

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 302   tggtgaagatttggagcaaca 322
             |||||||||||||||||||||
Sbjct: 61653 tggtgaagatttggagcaaca 61673
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>ref|NM_135090.2| Drosophila melanogaster CG7277-RA (CG7277), mRNA
          Length = 1579

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 154 tcaatggacttgaacagctcg 174
           |||||||||||||||||||||
Sbjct: 392 tcaatggacttgaacagctcg 372
to top
>gb|AY058443.1| Drosophila melanogaster GH22740 full length cDNA
          Length = 1592

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 154 tcaatggacttgaacagctcg 174
           |||||||||||||||||||||
Sbjct: 385 tcaatggacttgaacagctcg 365
to top
>gb|AC021863.5|AC021863 Homo sapiens BAC clone RP11-689K5 from 4, complete sequence
          Length = 194206

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 301    ttggtgaagatttggagcaac 321
              |||||||||||||||||||||
Sbjct: 175765 ttggtgaagatttggagcaac 175785
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 221     cttcccctctctcgtccttctccatgcac 249
               ||||||| ||||||||||||||| |||||
Sbjct: 5891490 cttcccccctctcgtccttctccgtgcac 5891462
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 285     cctgtcccctactggcttggtgaagatttggag 317
               |||||| || ||||||||||| |||||||||||
Sbjct: 6185329 cctgtctcccactggcttggttaagatttggag 6185297
to top
>gb|AC011063.8|AC011063 Drosophila melanogaster, chromosome 2L, region 25D-25D, BAC clone
              BACR44J04, complete sequence
          Length = 164884

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 154    tcaatggacttgaacagctcg 174
              |||||||||||||||||||||
Sbjct: 142616 tcaatggacttgaacagctcg 142636
to top
>gb|AC009910.5|AC009910 Drosophila melanogaster, chromosome 2L, region 25D-25E, BAC clone
             BACR35L07, complete sequence
          Length = 193924

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 154   tcaatggacttgaacagctcg 174
             |||||||||||||||||||||
Sbjct: 53219 tcaatggacttgaacagctcg 53239
to top
>gb|AC110078.2| Homo sapiens BAC clone RP11-358N5 from 2, complete sequence
          Length = 196117

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 301   ttggtgaagatttggagcaac 321
             |||||||||||||||||||||
Sbjct: 73078 ttggtgaagatttggagcaac 73098
to top
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNAa0090D11, complete sequence
          Length = 115403

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 285   cctgtcccctactggcttggtgaagatttggag 317
             |||||| || ||||||||||| |||||||||||
Sbjct: 24727 cctgtctcccactggcttggttaagatttggag 24695
to top
>dbj|AB007644.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19P17
          Length = 73840

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 38    ttacaaacaacattgttttcttttg 62
             ||||||| |||||||||||||||||
Sbjct: 31483 ttacaaataacattgttttcttttg 31459
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>gb|AF123487.1|AF123487 Jerry Slough virus polyprotein mRNA, complete cds
          Length = 4510

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  aaggaccagcttctatcctat 102
           |||||||||||||||||||||
Sbjct: 972 aaggaccagcttctatcctat 992
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>gb|U88058.1|JCU88058 Jamestown Canyon virus M segment polyprotein gene, complete cds
          Length = 4510

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  aaggaccagcttctatcctat 102
           |||||||||||||||||||||
Sbjct: 972 aaggaccagcttctatcctat 992
to top
>gb|AE003610.3| Drosophila melanogaster chromosome 2L, section 19 of 83 of the complete
             sequence
          Length = 260249

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 154   tcaatggacttgaacagctcg 174
             |||||||||||||||||||||
Sbjct: 96326 tcaatggacttgaacagctcg 96346
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>emb|AL954703.8| Zebrafish DNA sequence from clone CH211-51I10 in linkage group 1,
             complete sequence
          Length = 184073

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 109   tgaactgcagcagattgcttg 129
             |||||||||||||||||||||
Sbjct: 98762 tgaactgcagcagattgcttg 98742
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>emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0045O17,
             complete sequence
          Length = 137981

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 221   cttcccctctctcgtccttctccatgcac 249
             ||||||| ||||||||||||||| |||||
Sbjct: 34727 cttcccccctctcgtccttctccgtgcac 34699
to top
>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence
          Length = 129237

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 219    ctcttcccctctctcgtccttctcc 243
              ||||||||||||||| |||||||||
Sbjct: 104306 ctcttcccctctctcttccttctcc 104282
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>gb|AY351210.1| Paramunida pictura Fo156 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 36  tattacaaacaacattgttttctt 59
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
to top
>gb|AY351209.1| Paramunida pictura Fo155 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 36  tattacaaacaacattgttttctt 59
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
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>gb|AY351208.1| Paramunida pictura Fo177 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 36  tattacaaacaacattgttttctt 59
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
to top
>gb|AY351207.1| Paramunida pictura Fo176 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 522

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 36  tattacaaacaacattgttttctt 59
           ||||||||||||| ||||||||||
Sbjct: 350 tattacaaacaactttgttttctt 327
to top
>gb|AY351202.1| Paramunida labis Fo151 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 518

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 38  ttacaaacaacattgttttctttt 61
           ||||||||||| ||||||||||||
Sbjct: 345 ttacaaacaactttgttttctttt 322
to top
>gb|AY351201.1| Paramunida labis Fo64 16S ribosomal RNA gene, partial sequence;
           mitochondrial
          Length = 518

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 38  ttacaaacaacattgttttctttt 61
           ||||||||||| ||||||||||||
Sbjct: 345 ttacaaacaactttgttttctttt 322
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 360    ctggcattccttgatctgcgcctc 383
              |||||||||||||||| |||||||
Sbjct: 561497 ctggcattccttgatcagcgcctc 561520
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>gb|AF474718.1| Pygoscelis adeliae isolate S31 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474661.1| Pygoscelis adeliae isolate D201 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474657.1| Pygoscelis adeliae isolate D12 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474654.1| Pygoscelis adeliae isolate Cm67 mitochondrial control region,
           partial sequence
          Length = 328

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>gb|AF474545.1| Pygoscelis adeliae isolate D103 mitochondrial control region,
           partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>emb|CR774195.4| Zebrafish DNA sequence from clone DKEY-73P2 in linkage group 3,
             complete sequence
          Length = 161050

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    tacaaacaacattgttttct 58
             ||||||||||||||||||||
Sbjct: 48564 tacaaacaacattgttttct 48545
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>gb|AF188024.3| Homo sapiens chromosome 12 clone CTC-790L10 map 12p11.2, complete
             sequence
          Length = 111108

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 255   cctctggatcatctccaggaacaa 278
             ||||||||||||||| ||||||||
Sbjct: 69593 cctctggatcatctcaaggaacaa 69570
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>gb|AF474886.1| Pygoscelis adeliae isolate PE10.Bird.481 mitochondrial control
           region, partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>gb|AF474875.1| Pygoscelis adeliae isolate PE30.Cro.446 mitochondrial control
           region, partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>gb|AF474874.1| Pygoscelis adeliae isolate PE31.Bird.481 mitochondrial control
           region, partial sequence
          Length = 345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>gb|AF474809.1| Pygoscelis adeliae isolate PE132.Cro.523 mitochondrial control
           region, partial sequence
          Length = 331

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>gb|AF474808.1| Pygoscelis adeliae isolate PE135.Edmo.1086 mitochondrial control
           region, partial sequence
          Length = 330

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>gb|AF474802.1| Pygoscelis adeliae isolate PE151.Inexp.5706 mitochondrial control
           region, partial sequence
          Length = 316

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
to top
>gb|AF474800.1| Pygoscelis adeliae isolate PE162.Foot.5488 mitochondrial control
           region, partial sequence
          Length = 326

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 73  ccatgatacaaggaccagcttcta 96
           ||||| ||||||||||||||||||
Sbjct: 161 ccatggtacaaggaccagcttcta 138
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>emb|AL928657.21| Zebrafish DNA sequence from clone CH211-194I10 in linkage group 3,
            complete sequence
          Length = 187734

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 265  atctccaggaacaaggtcgg 284
            ||||||||||||||||||||
Sbjct: 6262 atctccaggaacaaggtcgg 6281
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>emb|BX511184.11| Zebrafish DNA sequence from clone DKEY-103A3 in linkage group 24,
             complete sequence
          Length = 209735

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   tgaactgcagcagattgctt 128
             ||||||||||||||||||||
Sbjct: 27370 tgaactgcagcagattgctt 27389
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>emb|BX511153.9| Zebrafish DNA sequence from clone DKEYP-66D1 in linkage group 2,
             complete sequence
          Length = 146969

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   tgaactgcagcagattgctt 128
             ||||||||||||||||||||
Sbjct: 60990 tgaactgcagcagattgctt 61009
to top
>gb|AC026330.12| Homo sapiens 3 BAC RP11-414D23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 188205

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     aattataacattgatataat 24
             ||||||||||||||||||||
Sbjct: 44693 aattataacattgatataat 44674
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>gb|AC068629.35| Homo sapiens 12 BAC RP11-162A11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 191117

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    cagctcctggcattccttga 373
              ||||||||||||||||||||
Sbjct: 102932 cagctcctggcattccttga 102913
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>gb|AC022363.24| Homo sapiens 12 BAC RP11-1151B7 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 114933

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 255   cctctggatcatctccaggaacaa 278
             ||||||||||||||| ||||||||
Sbjct: 77699 cctctggatcatctcaaggaacaa 77676
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>gb|AC114488.3| Homo sapiens chromosome 1 clone RP11-73M7, complete sequence
          Length = 184854

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    cagctcctggcattccttga 373
              ||||||||||||||||||||
Sbjct: 130943 cagctcctggcattccttga 130924
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>gb|CP000084.1| Candidatus Pelagibacter ubique HTCC1062, complete genome
          Length = 1308759

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 40     acaaacaacattgttttcttttgc 63
              ||||| ||||||||||||||||||
Sbjct: 821905 acaaataacattgttttcttttgc 821882
to top
>emb|BX247945.6| Zebrafish DNA sequence from clone CH211-209L14 in linkage group 24,
              complete sequence
          Length = 199345

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    tgaactgcagcagattgctt 128
              ||||||||||||||||||||
Sbjct: 196493 tgaactgcagcagattgctt 196512
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>emb|AJ309203.1|CBL309203 Coleus blumei mRNA for 4-hydroxyphenylpyruvate dioxygenase
            (hppd_SOLSC gene)
          Length = 1657

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 142/180 (78%), Gaps = 2/180 (1%)
 Strand = Plus / Minus

                                                                        
Query: 142  ttctcgtaatcttcaatggacttgaacagctcggagaagttgcctttgccgaacccgccg 201
            ||||| || ||||| || |||||||| || || |||||||| || || ||||| || || 
Sbjct: 1440 ttctcatattcttcgatagacttgaagagttctgagaagttcccctttccgaatcctcca 1381

                                                                        
Query: 202  cagccacccttctggtac-tcttcccctctctcgtccttctccatgcacccgatcctctg 260
            || || |||||||||||| |||| || ||| ||||| |||  ||||||||| |  |||||
Sbjct: 1380 catcctcccttctggtacatctttccttct-tcgtctttcatcatgcaccctactctctg 1322

                                                                        
Query: 261  gatcatctccaggaacaaggtcggcctgtcccctactggcttggtgaagatttggagcaa 320
             || ||||| | |||||| || ||||| || || ||||| || |||||||| || |||||
Sbjct: 1321 aattatctctatgaacaatgttggcctatcaccgactggtttagtgaagatctgaagcaa 1262
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>emb|BX005185.5| Zebrafish DNA sequence from clone CH211-132N11 in linkage group 24,
             complete sequence
          Length = 164521

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 109   tgaactgcagcagattgctt 128
             ||||||||||||||||||||
Sbjct: 54321 tgaactgcagcagattgctt 54340
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>emb|AL831746.5| Mouse DNA sequence from clone RP23-67O11 on chromosome 4, complete
              sequence
          Length = 239570

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     ttgttttcttttgctccatg 69
              ||||||||||||||||||||
Sbjct: 118645 ttgttttcttttgctccatg 118626
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>emb|AJ012046.1|AWI012046 Acomys wilsoni partial mitochondrial DNA for D-loop, specimen
           voucher Schlitter D. A., CM 98234
          Length = 356

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 6   attataacattgatataatt 25
           ||||||||||||||||||||
Sbjct: 100 attataacattgatataatt 81


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,869,384
Number of Sequences: 3902068
Number of extensions: 3869384
Number of successful extensions: 83785
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 83515
Number of HSP's gapped (non-prelim): 270
length of query: 448
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 426
effective length of database: 17,147,199,772
effective search space: 7304707102872
effective search space used: 7304707102872
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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