>emb|CR559945.12| Zebrafish DNA sequence from clone CH211-195E19 in linkage group 13,
             complete sequence
          Length = 186151

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 56    aaattgcaccacaagtttactgaga 80
             ||||||||||| |||||||||||||
Sbjct: 40715 aaattgcaccaaaagtttactgaga 40691

>emb|AL691431.20| Mouse DNA sequence from clone RP23-257P7 on chromosome 4 Contains the 5'
              end of a novel gene (2810031P15Rik), a ribosomal protein
              L10 (Rpl10) pseudogene, a ribosomal protein S6 (Rps6)
              pseudogene and two CpG islands, complete sequence
          Length = 199847

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    attggacacaggtgaaaatgg 348
              |||||||||||||||||||||
Sbjct: 173628 attggacacaggtgaaaatgg 173648

>gb|AC007537.3| Homo sapiens 12 BAC RPCI11-267J23 (Roswell Park Cancer Institute Human
              BAC Library) complete sequence
          Length = 190858

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 218    atattgcactgtgctggatta 238
              |||||||||||||||||||||
Sbjct: 139767 atattgcactgtgctggatta 139787

>emb|BX284670.11| Zebrafish DNA sequence from clone CH211-264D7 in linkage group 18,
              complete sequence
          Length = 159822

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 56     aaattgcaccacaagtttactgaga 80
              ||||||||||| |||||||||||||
Sbjct: 124594 aaattgcaccaaaagtttactgaga 124618

>gb|AC018647.5| Homo sapiens chromosome 7 clone RP11-379H18, complete sequence
          Length = 160732

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 271   attcaatcttggcaggctgt 290
             ||||||||||||||||||||
Sbjct: 93872 attcaatcttggcaggctgt 93891

>gb|AC111647.10| Rattus norvegicus 4 BAC CH230-103E9 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 232538

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    tgatacaaaaatttgaaatt 60
             ||||||||||||||||||||
Sbjct: 87075 tgatacaaaaatttgaaatt 87056

>emb|AL590725.5| Human DNA sequence from clone RP11-107L15 on chromosome 6 Contains the
             gene for G protein-coupled receptor slt
             (melanin-concentrating hormone 2) (SLT), the 3' end of a
             novel gene and a CpG island, complete sequence
          Length = 180708

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 272   ttcaatcttggcaggctgtt 291
             ||||||||||||||||||||
Sbjct: 74851 ttcaatcttggcaggctgtt 74832

>emb|AL513184.7| Human DNA sequence from clone RP11-386H19 on chromosome 6 Contains part
             of the UTRN gene for utrophin (homologous to dystrophin),
             complete sequence
          Length = 81461

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 340   tgaaaatggaagcaaaattt 359
             ||||||||||||||||||||
Sbjct: 75416 tgaaaatggaagcaaaattt 75397

>emb|AL137016.11| Human DNA sequence from clone RP4-595A18 on chromosome Xq26.3-27.2,
             complete sequence
          Length = 117847

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 340   tgaaaatggaagcaaaattt 359
             ||||||||||||||||||||
Sbjct: 81993 tgaaaatggaagcaaaattt 82012

>emb|AL512562.1|SPAPB1A10 S.pombe chromosome I BAC pB1A10
          Length = 36484

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 341   gaaaatggaagcaaaatttg 360
             ||||||||||||||||||||
Sbjct: 16387 gaaaatggaagcaaaatttg 16368

>gb|AC011592.5| Homo sapiens chromosome 3, clone RP11-42F12, complete sequence
          Length = 152132

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     aagtttactgagatctacct 87
              ||||||||||||||||||||
Sbjct: 150055 aagtttactgagatctacct 150036

>gb|AC068061.6| Homo sapiens chromosome 10 clone RP11-444F4, complete sequence
          Length = 190007

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 408   cttaatgcggaagtattctt 427
             ||||||||||||||||||||
Sbjct: 44993 cttaatgcggaagtattctt 45012

>gb|AC083803.8| Homo sapiens 3q BAC RP11-142C12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 142719

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     aagtttactgagatctacct 87
              ||||||||||||||||||||
Sbjct: 103519 aagtttactgagatctacct 103538

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 151     ctgctgattattattgctaa 170
               ||||||||||||||||||||
Sbjct: 8925107 ctgctgattattattgctaa 8925126

>gb|AC073945.34| Mus musculus strain C57BL/6J chromosome 9 clone rp23-171e18, complete
              sequence
          Length = 203394

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 42     gatacaaaaatttgaaattg 61
              ||||||||||||||||||||
Sbjct: 144962 gatacaaaaatttgaaattg 144943

>dbj|AP005801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OSJNBa0045M11
          Length = 159148

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 151   ctgctgattattattgctaa 170
             ||||||||||||||||||||
Sbjct: 85414 ctgctgattattattgctaa 85433

>dbj|BS000177.1| Pan troglodytes chromosome 22 clone:PTB-118H03, map 22, complete
             sequences
          Length = 267172

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   atggaagcaaaatttgcttc 364
             ||||||||||||||||||||
Sbjct: 48796 atggaagcaaaatttgcttc 48777

>dbj|BS000176.1| Pan troglodytes chromosome 22 clone:RP43-006O21, map 22, complete
              sequences
          Length = 146754

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 345    atggaagcaaaatttgcttc 364
              ||||||||||||||||||||
Sbjct: 138957 atggaagcaaaatttgcttc 138938

>gb|AC154679.2| Mus musculus BAC clone RP24-304O7 from 17, complete sequence
          Length = 164590

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    gatacaaaaatttgaaattg 61
             ||||||||||||||||||||
Sbjct: 59259 gatacaaaaatttgaaattg 59240

>gb|AC159896.3| Mus musculus BAC clone RP23-265F16 from chromosome 9, complete sequence
          Length = 198120

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     gatacaaaaatttgaaattg 61
              ||||||||||||||||||||
Sbjct: 187715 gatacaaaaatttgaaattg 187734

>gb|AC161259.2| Mus musculus BAC clone RP23-465D18 from chromosome 9, complete sequence
          Length = 175659

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 42     gatacaaaaatttgaaattg 61
              ||||||||||||||||||||
Sbjct: 123190 gatacaaaaatttgaaattg 123209


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,575,364
Number of Sequences: 3902068
Number of extensions: 5575364
Number of successful extensions: 99425
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99360
Number of HSP's gapped (non-prelim): 65
length of query: 443
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 421
effective length of database: 17,147,199,772
effective search space: 7218971104012
effective search space used: 7218971104012
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)