Clone Name | rbart32h08 |
---|---|
Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 141 bits (71), Expect = 2e-30 Identities = 118/134 (88%) Strand = Plus / Minus Query: 275 agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 334 ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 2976971 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2976912 Query: 335 acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 394 | ||||||||||||||| || ||||||| |||||||||| ||||||||| || ||||||| Sbjct: 2976911 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 2976852 Query: 395 gngtacttcgccag 408 | ||||||| |||| Sbjct: 2976851 gcgtacttctccag 2976838 Score = 141 bits (71), Expect = 2e-30 Identities = 118/134 (88%) Strand = Plus / Minus Query: 275 agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 334 ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 2948575 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2948516 Query: 335 acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 394 | ||||||||||||||| || ||||||| |||||||||| ||||||||| || ||||||| Sbjct: 2948515 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 2948456 Query: 395 gngtacttcgccag 408 | ||||||| |||| Sbjct: 2948455 gcgtacttctccag 2948442 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 326 ctctgctgcacgaagccgacgacgta 351 ||||||||||||| |||||||||||| Sbjct: 2941843 ctctgctgcacgatgccgacgacgta 2941818
>gb|AC134233.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0016I15, complete sequence Length = 166282 Score = 141 bits (71), Expect = 2e-30 Identities = 118/134 (88%) Strand = Plus / Minus Query: 275 agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 334 ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 114458 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 114399 Query: 335 acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 394 | ||||||||||||||| || ||||||| |||||||||| ||||||||| || ||||||| Sbjct: 114398 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 114339 Query: 395 gngtacttcgccag 408 | ||||||| |||| Sbjct: 114338 gcgtacttctccag 114325 Score = 141 bits (71), Expect = 2e-30 Identities = 118/134 (88%) Strand = Plus / Minus Query: 275 agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 334 ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 86062 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 86003 Query: 335 acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 394 | ||||||||||||||| || ||||||| |||||||||| ||||||||| || ||||||| Sbjct: 86002 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 85943 Query: 395 gngtacttcgccag 408 | ||||||| |||| Sbjct: 85942 gcgtacttctccag 85929 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 326 ctctgctgcacgaagccgacgacgta 351 ||||||||||||| |||||||||||| Sbjct: 79330 ctctgctgcacgatgccgacgacgta 79305
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 141 bits (71), Expect = 2e-30 Identities = 118/134 (88%) Strand = Plus / Minus Query: 275 agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 334 ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 2977082 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2977023 Query: 335 acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 394 | ||||||||||||||| || ||||||| |||||||||| ||||||||| || ||||||| Sbjct: 2977022 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 2976963 Query: 395 gngtacttcgccag 408 | ||||||| |||| Sbjct: 2976962 gcgtacttctccag 2976949 Score = 141 bits (71), Expect = 2e-30 Identities = 118/134 (88%) Strand = Plus / Minus Query: 275 agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 334 ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 2948686 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 2948627 Query: 335 acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 394 | ||||||||||||||| || ||||||| |||||||||| ||||||||| || ||||||| Sbjct: 2948626 atgaagccgacgacgtaggccgccgtgatcagccggatgccgcgccaccgcctctcctcg 2948567 Query: 395 gngtacttcgccag 408 | ||||||| |||| Sbjct: 2948566 gcgtacttctccag 2948553 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 326 ctctgctgcacgaagccgacgacgta 351 ||||||||||||| |||||||||||| Sbjct: 2941954 ctctgctgcacgatgccgacgacgta 2941929
>dbj|AK106358.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-A09, full insert sequence Length = 1661 Score = 133 bits (67), Expect = 5e-28 Identities = 117/134 (87%) Strand = Plus / Minus Query: 275 agcaaccccgacaggaacttctctctgaggaacttgatcgccgggttgctgctctgctgc 334 ||||| || |||| ||||||||| ||||||||||||||| |||||||| |||||||||| Sbjct: 1274 agcaatcctgacaagaacttctccctgaggaacttgatcaccgggttggtgctctgctgg 1215 Query: 335 acgaagccgacgacgtacgcggccgtgaccagccggatggcgcgccacctccgctcctcg 394 | ||||||||||||||| || |||||| |||||||||| ||||||||| || ||||||| Sbjct: 1214 atgaagccgacgacgtaggccgccgtggtcagccggatgccgcgccaccgcctctcctcg 1155 Query: 395 gngtacttcgccag 408 | ||||||| |||| Sbjct: 1154 gcgtacttctccag 1141
>dbj|AK106420.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-B02, full insert sequence Length = 1590 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Minus Query: 326 ctctgctgcacgaagccgacgacgta 351 ||||||||||||| |||||||||||| Sbjct: 1359 ctctgctgcacgatgccgacgacgta 1334
>emb|AL645760.15| Mouse DNA sequence from clone DN-262D11 on chromosome 3 Contains the 5' end of the Man1b gene for mannosidase 1 beta, a pseudogene similar to arylsulfatase A (Arsa) and a CpG island, complete sequence Length = 135825 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 aagataattattttacatctg 105 ||||||||||||||||||||| Sbjct: 29126 aagataattattttacatctg 29106
>gb|AC062016.5| Homo sapiens BAC clone RP11-59P4 from 2, complete sequence Length = 187799 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 aaaaggaaacaaatcttaaag 51 ||||||||||||||||||||| Sbjct: 166903 aaaaggaaacaaatcttaaag 166923
>gb|AE001438.3| Clostridium acetobutylicum ATCC 824 megaplasmid pSOL1, complete sequence Length = 192000 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 gaaaaggaaacaaatcttaaa 50 ||||||||||||||||||||| Sbjct: 20866 gaaaaggaaacaaatcttaaa 20886
>emb|AL606757.11| Mouse DNA sequence from clone RP23-356K2 on chromosome 3, complete sequence Length = 127113 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 85 aagataattattttacatctg 105 ||||||||||||||||||||| Sbjct: 123818 aagataattattttacatctg 123798
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 cgtagtcggccatgtcgaccatca 266 |||||| ||||||||||||||||| Sbjct: 3121354 cgtagtgggccatgtcgaccatca 3121377
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 cgtagtcggccatgtcgaccatca 266 |||||| ||||||||||||||||| Sbjct: 811765 cgtagtgggccatgtcgaccatca 811742
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 243 cgtagtcggccatgtcgaccatca 266 |||||| ||||||||||||||||| Sbjct: 2666685 cgtagtgggccatgtcgaccatca 2666708
>gb|BC046426.1| Mus musculus RIKEN cDNA E130103I17 gene, mRNA (cDNA clone MGC:51441 IMAGE:3601505), complete cds Length = 3408 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aattattttacatctggatc 109 |||||||||||||||||||| Sbjct: 3317 aattattttacatctggatc 3298
>gb|BC054441.1| Mus musculus RIKEN cDNA E130103I17 gene, mRNA (cDNA clone IMAGE:6468740), complete cds Length = 1654 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aattattttacatctggatc 109 |||||||||||||||||||| Sbjct: 1564 aattattttacatctggatc 1545
>gb|AC164882.2| Mus musculus BAC clone RP23-88F16 from chromosome 9, complete sequence Length = 203020 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 90 aattattttacatctggatc 109 |||||||||||||||||||| Sbjct: 41469 aattattttacatctggatc 41488
>gb|AF496108.1| Lactobacillus delbrueckii subsp. lactis 50s ribosomal protein L19 gene, partial cds Length = 318 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 344 acgacgtacgcggccgtgac 363 |||||||||||||||||||| Sbjct: 143 acgacgtacgcggccgtgac 124
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 411 cggcctcggcgctcccgtgcccgc 434 ||||||||||||| |||||||||| Sbjct: 2520468 cggcctcggcgctgccgtgcccgc 2520445
>gb|BC030419.1| Mus musculus RIKEN cDNA E130103I17 gene, mRNA (cDNA clone IMAGE:5368562), partial cds Length = 2777 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aattattttacatctggatc 109 |||||||||||||||||||| Sbjct: 2669 aattattttacatctggatc 2650
>emb|BX294143.1| Pirellula sp. strain 1 complete genome; segment 11/24 Length = 303250 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 243 cgtagtcggccatgtcgaccatca 266 |||||| ||||||||||||||||| Sbjct: 230174 cgtagtgggccatgtcgaccatca 230151
>gb|AC124657.5| Homo sapiens chromosome 11, clone RP11-624D11, complete sequence Length = 155985 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 31 aaaaggaaacaaatcttaaagagc 54 ||||||||||||||| |||||||| Sbjct: 132165 aaaaggaaacaaatcataaagagc 132142
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 tgaccagccggatggcgcgc 379 |||||||||||||||||||| Sbjct: 1479193 tgaccagccggatggcgcgc 1479174
>gb|AC037450.6| Homo sapiens chromosome 8, clone RP11-226G12, complete sequence Length = 169876 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 tactgatgtgagaaaaggaa 38 |||||||||||||||||||| Sbjct: 21405 tactgatgtgagaaaaggaa 21386
>dbj|AK144730.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730027N14 product:hypothetical protein, full insert sequence Length = 3403 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aattattttacatctggatc 109 |||||||||||||||||||| Sbjct: 3332 aattattttacatctggatc 3313
>ref|NM_181316.3| Mus musculus RIKEN cDNA E130103I17 gene (E130103I17Rik), mRNA Length = 3408 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aattattttacatctggatc 109 |||||||||||||||||||| Sbjct: 3317 aattattttacatctggatc 3298
>dbj|AK166297.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length enriched library, clone:G830032M02 product:hypothetical protein, full insert sequence Length = 3363 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aattattttacatctggatc 109 |||||||||||||||||||| Sbjct: 3288 aattattttacatctggatc 3269
>gb|AC020930.7|AC020930 Homo sapiens chromosome 5 clone CTD-2239K17, complete sequence Length = 107160 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agttgtaagataattatttt 98 |||||||||||||||||||| Sbjct: 100661 agttgtaagataattatttt 100680
>dbj|AK028200.1| Mus musculus 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2700038G09 product:similar to PTH-RESPONSIVE OSTEOSARCOMA B1 PROTEIN [Homo sapiens], full insert sequence Length = 3466 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aattattttacatctggatc 109 |||||||||||||||||||| Sbjct: 3395 aattattttacatctggatc 3376
>dbj|AK086114.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930006P03 product:similar to PTH-RESPONSIVE OSTEOSARCOMA B1 PROTEIN [Homo sapiens], full insert sequence Length = 3348 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aattattttacatctggatc 109 |||||||||||||||||||| Sbjct: 3277 aattattttacatctggatc 3258
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 acaaatcttaaagagctttcatcc 62 ||||||||||||||| |||||||| Sbjct: 22669535 acaaatcttaaagagatttcatcc 22669512
>gb|AC079163.5| Homo sapiens BAC clone RP11-707K3 from 2, complete sequence Length = 169771 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agttgtaagataattatttt 98 |||||||||||||||||||| Sbjct: 139226 agttgtaagataattatttt 139245
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 ggcgctcccgtgcccgccgg 437 |||||||||||||||||||| Sbjct: 8012988 ggcgctcccgtgcccgccgg 8012969
>gb|AC008939.8| Homo sapiens chromosome 5 clone CTD-2316B1, complete sequence Length = 112755 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agttgtaagataattatttt 98 |||||||||||||||||||| Sbjct: 21044 agttgtaagataattatttt 21063
>dbj|AP003932.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1773_H01 Length = 146543 Score = 40.1 bits (20), Expect = 6.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 39 acaaatcttaaagagctttcatcc 62 ||||||||||||||| |||||||| Sbjct: 87433 acaaatcttaaagagatttcatcc 87410
>gb|AC154342.2| Mus musculus BAC clone RP23-227D10 from 17, complete sequence Length = 199709 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 atgtgagaaaaggaaacaaa 43 |||||||||||||||||||| Sbjct: 17838 atgtgagaaaaggaaacaaa 17819
>gb|AC005066.1|AC005066 Homo sapiens BAC clone CTB-118P15 from 8q21, complete sequence Length = 226916 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 tactgatgtgagaaaaggaa 38 |||||||||||||||||||| Sbjct: 9266 tactgatgtgagaaaaggaa 9285
>emb|CT025832.1| Acinetobacter baumannii str. AYE. Genomics of Multi-Drug Resistance in Acinetobacter baumannii Length = 100001 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gcatcaaatcgatttgattg 167 |||||||||||||||||||| Sbjct: 18406 gcatcaaatcgatttgattg 18387
>dbj|AB103396.1| Ixodes ovatus genes for 5.8S ribosomal RNA, internal transcribed spacer 2, 28S ribosomal RNA, partial and complete sequence Length = 831 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 atgtgagaaaaggaaacaaa 43 |||||||||||||||||||| Sbjct: 295 atgtgagaaaaggaaacaaa 314
>dbj|AB103049.1| Ixodes ovatus genes for 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequences, strain:NIO14 Length = 831 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 atgtgagaaaaggaaacaaa 43 |||||||||||||||||||| Sbjct: 293 atgtgagaaaaggaaacaaa 312
>dbj|AB103046.1| Ixodes ovatus genes for 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequences, strain:NIO11 Length = 836 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 atgtgagaaaaggaaacaaa 43 |||||||||||||||||||| Sbjct: 296 atgtgagaaaaggaaacaaa 315
>dbj|AB103044.1| Ixodes ovatus genes for ITS2, 28S rRNA, partial sequences, strain:NIO9 Length = 680 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 atgtgagaaaaggaaacaaa 43 |||||||||||||||||||| Sbjct: 145 atgtgagaaaaggaaacaaa 164
>dbj|AB103043.1| Ixodes ovatus genes for 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequences, strain:NIO8 Length = 838 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 atgtgagaaaaggaaacaaa 43 |||||||||||||||||||| Sbjct: 297 atgtgagaaaaggaaacaaa 316
>emb|CT033757.6| Mouse DNA sequence from clone RP23-125M6 on chromosome 17, complete sequence Length = 44371 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 atgtgagaaaaggaaacaaa 43 |||||||||||||||||||| Sbjct: 14318 atgtgagaaaaggaaacaaa 14337
>gb|U85993.1|MMU85993 Mus musculus clone IMAGE:349147 unknown protein mRNA, partial cds Length = 945 Score = 40.1 bits (20), Expect = 6.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 90 aattattttacatctggatc 109 |||||||||||||||||||| Sbjct: 870 aattattttacatctggatc 851
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 6.0 Identities = 22/23 (95%) Strand = Plus / Minus Query: 392 tcggngtacttcgccagggcggc 414 |||| |||||||||||||||||| Sbjct: 2762888 tcggggtacttcgccagggcggc 2762866 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,727,629 Number of Sequences: 3902068 Number of extensions: 3727629 Number of successful extensions: 77548 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76951 Number of HSP's gapped (non-prelim): 597 length of query: 444 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 422 effective length of database: 17,147,199,772 effective search space: 7236118303784 effective search space used: 7236118303784 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)