ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart32h04 |
|---|---|
| Clone Library Name | barley_pub |
>PSB7A_ARATH (O23710) Proteasome subunit beta type 7-A precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-1) (Proteasome component FA) (Proteasome component FB) Length = 273 Score = 142 bits (359), Expect = 3e-34 Identities = 76/106 (71%), Positives = 89/106 (83%), Gaps = 1/106 (0%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRIH 276 GSLAAMSVFE KY+EGL+R+EGI LVAE+I +GIFNDLGSGSNVD+CVI+KGN EYLR + Sbjct: 169 GSLAAMSVFEAKYKEGLTRDEGIKLVAESICSGIFNDLGSGSNVDICVITKGNKEYLRNY 228 Query: 275 ELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLKPEVAD-GDAMEE 141 PNPRT+VSSKGYSF K TEVL TKIT L + E+ + G+AMEE Sbjct: 229 MEPNPRTYVSSKGYSFTK-KTEVLLTKITPLLERVEITEVGEAMEE 273
>PSB7B_ARATH (Q7DLS1) Proteasome subunit beta type 7-B precursor (EC 3.4.25.1)| (Proteasome subunit beta type 2) (20S proteasome beta subunit B-2) (Proteasome component FC) Length = 274 Score = 141 bits (356), Expect = 7e-34 Identities = 76/107 (71%), Positives = 89/107 (83%), Gaps = 2/107 (1%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRIH 276 GSLAAMSVFE KY+EGL+R+EGI LVAEAI +GIFNDLGSGSNVD+CVI+KG+ EYLR + Sbjct: 169 GSLAAMSVFEAKYKEGLTRDEGIKLVAEAICSGIFNDLGSGSNVDICVITKGHKEYLRNY 228 Query: 275 ELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLKPEVAD--GDAMEE 141 PNPRT+VSSKGYSF K TEVL TKIT L + E+ + G+AMEE Sbjct: 229 MEPNPRTYVSSKGYSFTK-KTEVLLTKITPLLERVEIVEVAGEAMEE 274
>PSB7_RAT (Q9JHW0) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 94.0 bits (232), Expect = 2e-19 Identities = 50/94 (53%), Positives = 66/94 (70%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRIH 276 GSLAAM+VFE K+R + EE LV+EAI AGIFNDLGSGSN+D+CVISK ++LR + Sbjct: 173 GSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPY 232 Query: 275 ELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLK 174 +PN + + Y KG T VL+ K+T L+L+ Sbjct: 233 SVPNKKGTRFGR-YRCEKGTTAVLTEKVTPLELE 265
>PSB7_HUMAN (Q99436) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 92.8 bits (229), Expect = 4e-19 Identities = 50/94 (53%), Positives = 66/94 (70%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRIH 276 GSLAAM+VFE K+R + EE LV+EAI AGIFNDLGSGSN+D+CVISK ++LR + Sbjct: 173 GSLAAMAVFEDKFRPDMEEEEAKNLVSEAIAAGIFNDLGSGSNIDLCVISKNKLDFLRPY 232 Query: 275 ELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLK 174 +PN + + Y KG T VL+ KIT L+++ Sbjct: 233 TVPNKKGTRLGR-YRCEKGTTAVLTEKITPLEIE 265
>PSB7_MOUSE (P70195) Proteasome subunit beta type 7 precursor (EC 3.4.25.1)| (Proteasome subunit Z) (Macropain chain Z) (Multicatalytic endopeptidase complex chain Z) Length = 277 Score = 92.0 bits (227), Expect = 6e-19 Identities = 49/94 (52%), Positives = 65/94 (69%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRIH 276 GSLAAM+VFE K+R + EE LV+EAI AGIFNDLGSGSN+D+CVISK ++LR Sbjct: 173 GSLAAMAVFEDKFRPDMEEEEAKKLVSEAIAAGIFNDLGSGSNIDLCVISKSKLDFLRPF 232 Query: 275 ELPNPRTFVSSKGYSFNKGHTEVLSTKITQLKLK 174 +PN + + Y KG T VL+ K+T L+++ Sbjct: 233 SVPNKKGTRLGR-YRCEKGTTAVLTEKVTPLEIE 265
>PSB7_YEAST (P25043) Proteasome component PUP1 precursor (EC 3.4.25.1)| (Macropain subunit PUP1) (Proteinase YSCE subunit PUP1) (Multicatalytic endopeptidase complex subunit PUP1) Length = 261 Score = 84.7 bits (208), Expect = 1e-16 Identities = 47/92 (51%), Positives = 62/92 (67%), Gaps = 1/92 (1%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKG-NTEYLRI 279 GSLAAM+V E +++ L++EE I L ++AI+AGI+NDLGSGSNVDVCV+ G + EYLR Sbjct: 159 GSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEIGKDAEYLRN 218 Query: 278 HELPNPRTFVSSKGYSFNKGHTEVLSTKITQL 183 + PN R K Y F +G T VL I + Sbjct: 219 YLTPNVRE-EKQKSYKFPRGTTAVLKESIVNI 249
>PSB7_SCHPO (Q09841) Probable proteasome subunit beta type 7 precursor (EC| 3.4.25.1) Length = 267 Score = 78.6 bits (192), Expect = 7e-15 Identities = 45/88 (51%), Positives = 55/88 (62%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRIH 276 GSLAA+SV E KY+ L R E + LV EAI AGIFNDLGSGSN D+ VI + R + Sbjct: 165 GSLAAISVLETKYQPDLERHEAMELVKEAIEAGIFNDLGSGSNCDLVVIDEEKATPYRGY 224 Query: 275 ELPNPRTFVSSKGYSFNKGHTEVLSTKI 192 PN R SK Y++++G T VL I Sbjct: 225 SKPNERATKQSK-YTYDRGTTAVLKEDI 251
>PSB10_HUMAN (P40306) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 62.0 bits (149), Expect = 7e-10 Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRIH 276 G AA++V E +++ ++ E L+ EA+ AGI DLGSG NVD CVI+K + LR Sbjct: 169 GQDAALAVLEDRFQPNMTLEAAQGLLVEAVTAGILGDLGSGGNVDACVITKTGAKLLR-- 226 Query: 275 ELPNPRTFVSSKG-YSFNKGHTEVLSTKITQLKLKPEVADGDAME 144 L +P V G Y F G T VL+ + L L+ AME Sbjct: 227 TLSSPTEPVKRSGRYHFVPGTTAVLTQTVKPLTLELVEETVQAME 271
>PSB10_MOUSE (O35955) Proteasome subunit beta type 10 precursor (EC 3.4.25.1)| (Proteasome MECl-1) (Macropain subunit MECl-1) (Multicatalytic endopeptidase complex subunit MECl-1) Length = 273 Score = 59.3 bits (142), Expect = 4e-09 Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 1/105 (0%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRIH 276 G AA+++ E +++ ++ E L+ EAI AGI +DLGSG NVD CVI+ G + R Sbjct: 169 GQGAAVALLEDRFQPNMTLEAAQELLVEAITAGILSDLGSGGNVDACVITAGGAKLQR-- 226 Query: 275 ELPNPRTFVSSKG-YSFNKGHTEVLSTKITQLKLKPEVADGDAME 144 L P V G Y F G T VL+ ++ L L+ AME Sbjct: 227 ALSTPTEPVQRAGRYRFAPGTTPVLTREVRPLTLELLEETVQAME 271
>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 210 Score = 42.4 bits (98), Expect = 6e-04 Identities = 25/70 (35%), Positives = 37/70 (52%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRIH 276 GS A V E +YRE ++ +EG+ L AI D SG N+DV VI+K + L Sbjct: 141 GSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENIDVVVITKEAFKRLDPE 200 Query: 275 ELPNPRTFVS 246 E+ + R ++ Sbjct: 201 EVKSRRALLN 210
>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 207 Score = 36.6 bits (83), Expect = 0.031 Identities = 19/47 (40%), Positives = 27/47 (57%) Frame = -3 Query: 443 AMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISK 303 A SV + +YRE L EGI + EAI + I D+ SG + V I++ Sbjct: 144 AYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIMVVTITE 190
>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 211 Score = 36.6 bits (83), Expect = 0.031 Identities = 20/51 (39%), Positives = 28/51 (54%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISK 303 GS V E +Y E ++ +EG+ LV AI A D SG +DV VI++ Sbjct: 138 GSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVITR 188
>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)| (Multicatalytic endopeptidase complex beta subunit) Length = 206 Score = 34.7 bits (78), Expect = 0.12 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Frame = -3 Query: 443 AMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISK-GNTEY 288 A S+ + +YRE +S +GI L +AI I D+ +G + V I+K G EY Sbjct: 144 AYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLLVVTITKDGYKEY 196
>PSMA_PYRFU (Q8U0L6) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 33.5 bits (75), Expect = 0.26 Identities = 18/59 (30%), Positives = 34/59 (57%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRI 279 G AM++FE KYR+ ++ E+ I L A+ + N S N++V VI+ + ++ ++ Sbjct: 169 GRNTAMAIFEEKYRDDMNLEDAIKLALMALAKTMENP--SADNIEVAVITVKDKKFRKL 225
>PSMA_METJA (Q60177) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) (20S proteasome alpha subunit) Length = 261 Score = 33.1 bits (74), Expect = 0.34 Identities = 17/59 (28%), Positives = 32/59 (54%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRI 279 G M + E +YR+ ++ +EG+ L A+ N+ NVDVC+I+ + ++ +I Sbjct: 169 GRPVVMELLEKEYRDDITLDEGLELAITALTKA--NEDIKPENVDVCIITVKDAQFKKI 225
>UBP4_YEAST (P32571) Ubiquitin carboxyl-terminal hydrolase 4 (EC 3.1.2.15)| (Ubiquitin thioesterase 4) (Ubiquitin-specific-processing protease 4) (Deubiquitinating enzyme 4) (Vacuole biogenesis protein SSV7) Length = 926 Score = 32.7 bits (73), Expect = 0.45 Identities = 24/72 (33%), Positives = 36/72 (50%) Frame = +1 Query: 58 SRTSTEKKEEMAQILSMTACLNVSTQDHSSIASPSATSGFSFSCVIFVDNTSVCPLLKLY 237 SRT+T K + Q +SM LN+++ HSS S S S S +D+T V P + Sbjct: 498 SRTATPKLQRFPQTISMN--LNMNSNGHSSATSTIQPSCLSLSNNDSLDHTDVTP-TSSH 554 Query: 238 PFELTKVLGFGN 273 ++L +G N Sbjct: 555 NYDLDFAVGLEN 566
>GPDA_HAEDU (Q7VNA0) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 336 Score = 32.7 bits (73), Expect = 0.45 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHEL--PNPRTFVSSKG 237 AI AGI + +G G+N +I++G E R+ E NP+TF+ G Sbjct: 200 AIGAGISDGMGFGANARTALITRGLAEISRLGESLGANPKTFMGMAG 246
>PSMA_PYRHO (O59219) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 32.3 bits (72), Expect = 0.58 Identities = 17/59 (28%), Positives = 34/59 (57%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRI 279 G AM++FE KY++ +S EE I L A+ + + S N++V +I+ + ++ ++ Sbjct: 169 GRNTAMAIFEEKYKDDMSLEEAIKLAIFALAKTM--EKPSAENIEVAIITVKDKKFRKL 225
>PSMA_PYRAB (Q9V122) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 260 Score = 31.2 bits (69), Expect = 1.3 Identities = 17/59 (28%), Positives = 34/59 (57%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRI 279 G AM++FE KYR+ ++ +E I L A+ + + S N++V VI+ + ++ ++ Sbjct: 169 GRNTAMAIFEDKYRDDMTLDEAIKLAIFALAKTM--EKPSAENIEVAVITVKDKKFRKL 225
>PSB6_HUMAN (P28072) Proteasome subunit beta type 6 precursor (EC 3.4.25.1)| (Proteasome delta chain) (Macropain delta chain) (Multicatalytic endopeptidase complex delta chain) (Proteasome subunit Y) Length = 239 Score = 30.0 bits (66), Expect = 2.9 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTE 291 GS + YREG+++EE + A A+ + D SG + + I++ E Sbjct: 165 GSSYIYGYVDATYREGMTKEECLQFTANALALAMERDGSSGGVIRLAAIAESGVE 219
>PSMA_THEVO (Q97BZ8) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 233 Score = 30.0 bits (66), Expect = 2.9 Identities = 13/34 (38%), Positives = 22/34 (64%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGI 354 G A +S E +Y+EGLS +E + L +A++A + Sbjct: 168 GKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASL 201
>VHP1_CAEEL (Q10038) Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual| specificity phosphatase family protein 1) Length = 657 Score = 30.0 bits (66), Expect = 2.9 Identities = 31/111 (27%), Positives = 46/111 (41%), Gaps = 1/111 (0%) Frame = +1 Query: 127 STQDHSSIASPSATSGFSFSCVIFVDNTSVCPLLKLYPFELTKVLGFGNSWILKYSVFPL 306 ST D SS +SPS + G + S + + P + G S Sbjct: 360 STHDESSPSSPSVSEGSAASEPETSSSAASSSSTASAPPSMPSTSEQGTSSGTVNVNGKR 419 Query: 307 DITQTSTLLPLPKSLKIPARIASATSAIPS-SLERPSLYFNSNTDIAARDP 456 ++T L PK+L +P+RI ++ + +PS S E L FN IA P Sbjct: 420 NMTMDLGLPHRPKALGLPSRIGTSVAELPSPSTELSRLSFNGPEAIAPSTP 470
>GPDA_BACHK (Q6HL50) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHEL--PNPRTFVSSKG 237 A+ AGI + LG G N ++++G TE R+ NP TF G Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242
>GPDA_BACCZ (Q63DM7) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHEL--PNPRTFVSSKG 237 A+ AGI + LG G N ++++G TE R+ NP TF G Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242
>GPDA_BACCR (Q81FR4) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHEL--PNPRTFVSSKG 237 A+ AGI + LG G N ++++G TE R+ NP TF G Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242
>GPDA_BACC1 (P61737) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHEL--PNPRTFVSSKG 237 A+ AGI + LG G N ++++G TE R+ NP TF G Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242
>GPDA_BACAN (Q81SW8) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 29.6 bits (65), Expect = 3.8 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHEL--PNPRTFVSSKG 237 A+ AGI + LG G N ++++G TE R+ NP TF G Sbjct: 196 ALAAGITDGLGLGDNAKAALMTRGLTEIARLGRKMGGNPLTFAGLTG 242
>PSMA_METKA (Q8TYB7) Proteasome alpha subunit (EC 3.4.25.1) (Multicatalytic| endopeptidase complex alpha subunit) Length = 246 Score = 29.3 bits (64), Expect = 4.9 Identities = 15/51 (29%), Positives = 27/51 (52%) Frame = -3 Query: 455 GSLAAMSVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISK 303 G A+ VFE +YRE ++ +E I L A+ + + N+++ V+ K Sbjct: 170 GRQEALDVFEEEYREDMTLQEAIELAVRALYEASREET-TADNLEIAVVDK 219
>GPDA_SYMTH (Q67NS7) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 342 Score = 29.3 bits (64), Expect = 4.9 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHEL--PNPRTFVSSKG 237 A+ AGI + LG G N +I++G E R+ NP TF G Sbjct: 191 ALGAGISDGLGMGDNARAALITRGLVEMARLGRAMGANPLTFAGLAG 237
>PSA4_ORYSA (Q9LE92) Proteasome subunit alpha type 4 (EC 3.4.25.1) (20S| proteasome alpha subunit C) (20S proteasome subunit alpha-3) Length = 250 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/29 (41%), Positives = 20/29 (68%) Frame = -3 Query: 452 SLAAMSVFELKYREGLSREEGIALVAEAI 366 S AA S+ + YR+G++REE +AL + + Sbjct: 168 SQAAQSMLKQDYRDGMTREEAVALALKVL 196
>CSPG2_MOUSE (Q62059) Versican core protein precursor (Large fibroblast| proteoglycan) (Chondroitin sulfate proteoglycan core protein 2) (PG-M) Length = 3358 Score = 29.3 bits (64), Expect = 4.9 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 8/47 (17%) Frame = +1 Query: 319 TSTLLPLPKS--------LKIPARIASATSAIPSSLERPSLYFNSNT 435 T TL PL S + IPA IA S +PS RP+ +NSN+ Sbjct: 1634 TDTLSPLDMSKIMITNHHIYIPATIAPLDSKLPSPDARPTTVWNSNS 1680
>MDM34_YEAST (P53083) Mitochondrial distribution and morphology protein 34| (Mitochondrial outer membrane protein MMM2) Length = 459 Score = 29.3 bits (64), Expect = 4.9 Identities = 12/40 (30%), Positives = 26/40 (65%) Frame = +1 Query: 301 PLDITQTSTLLPLPKSLKIPARIASATSAIPSSLERPSLY 420 P+++ + S+++ +L + + + ++ SAIP LER +LY Sbjct: 232 PINMLRLSSIVSSRSTLSLHSTVMNSLSAIPGCLERQNLY 271
>TMP14_ARATH (Q8LCA1) Thylakoid membrane phosphoprotein 14 kDa, chloroplast| precursor Length = 174 Score = 28.9 bits (63), Expect = 6.4 Identities = 16/47 (34%), Positives = 29/47 (61%) Frame = +1 Query: 304 LDITQTSTLLPLPKSLKIPARIASATSAIPSSLERPSLYFNSNTDIA 444 L ++ +ST++ S P+R+ASA+++ PS + P+L S+T A Sbjct: 4 LSVSSSSTIID---SRAPPSRLASASASSPSCISLPTLPIQSHTRAA 47
>GPDA_GLOVI (Q7NF59) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 305 Score = 28.9 bits (63), Expect = 6.4 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRI 279 AI AG+ + LG G+N +I++G E +R+ Sbjct: 166 AIAAGVSDGLGLGANAKAALITRGLAEMIRV 196
>FLII_BORBU (P52607) Flagellum-specific ATP synthase (EC 3.6.3.14)| Length = 436 Score = 28.9 bits (63), Expect = 6.4 Identities = 23/91 (25%), Positives = 42/91 (46%) Frame = -3 Query: 437 SVFELKYREGLSREEGIALVAEAIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHELPNPR 258 S+FE + G+ +G VA+ R GIF+ G G + + +I+K + + N Sbjct: 136 SIFEDQILTGVKVLDGFLPVAKGQRVGIFSGSGVGKSTLLGMIAKNSNADV------NVI 189 Query: 257 TFVSSKGYSFNKGHTEVLSTKITQLKLKPEV 165 F+ +G N E + ++ + +LK V Sbjct: 190 AFIGERGRELN----EFIEHELGEERLKKSV 216
>Y199_DEIRA (Q9RXV7) UPF0133 protein DR0199| Length = 96 Score = 28.9 bits (63), Expect = 6.4 Identities = 11/18 (61%), Positives = 14/18 (77%) Frame = -3 Query: 197 KITQLKLKPEVADGDAME 144 K+T LK+KPE DGD +E Sbjct: 46 KVTSLKIKPEAVDGDDVE 63
>GPDA_DESPS (Q6AQJ3) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 339 Score = 28.9 bits (63), Expect = 6.4 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHELPN--PRTFVSSKG 237 AI AGI + L GSN +I++G E R+ N P TF G Sbjct: 203 AIAAGISDGLSYGSNARAALITRGLAEMQRLGAAMNADPATFAGLSG 249
>GPDA_METCA (Q604K1) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 335 Score = 28.9 bits (63), Expect = 6.4 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHELPNPRT 255 AI AGI + LG G+N +I++G E +R+ RT Sbjct: 196 AIAAGISDGLGFGANARAALITRGLAEMMRLSLALGART 234
>TIE1_BOVIN (Q06805) Tyrosine-protein kinase receptor Tie-1 precursor (EC| 2.7.10.1) Length = 1136 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/44 (29%), Positives = 20/44 (45%) Frame = -3 Query: 311 ISKGNTEYLRIHELPNPRTFVSSKGYSFNKGHTEVLSTKITQLK 180 + G T L +H P ++ NKG T VLS ++ + K Sbjct: 107 VGGGGTRVLYVHNSPGAHLLPDKVTHTVNKGDTAVLSARVRKEK 150
>CSN5_GIBZE (Q4IJM4) COP9 signalosome complex subunit 5 (EC 3.4.-.-)| Length = 340 Score = 28.5 bits (62), Expect = 8.4 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = -3 Query: 407 LSREEGIALVAEAIRAGIFNDLGSGSN 327 ++ +E L+A ++A +FNDLGS +N Sbjct: 310 IASKERSGLIANQVKASLFNDLGSKAN 336
>GPDA_LISMO (Q8Y5W9) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 338 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHEL--PNPRTFVSSKG 237 A+ AGI + LG G N ++++G E R+ NP+TF G Sbjct: 198 ALGAGISDGLGYGDNAKAALMTRGMAEITRLGVAVGSNPQTFYGLTG 244
>GPDA_LISMF (Q71Y79) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 338 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHEL--PNPRTFVSSKG 237 A+ AGI + LG G N ++++G E R+ NP+TF G Sbjct: 198 ALGAGISDGLGYGDNAKAALMTRGMAEITRLGVAVGSNPQTFYGLTG 244
>GPDA_LISIN (Q92A72) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 338 Score = 28.5 bits (62), Expect = 8.4 Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 2/47 (4%) Frame = -3 Query: 371 AIRAGIFNDLGSGSNVDVCVISKGNTEYLRIHEL--PNPRTFVSSKG 237 A+ AGI + LG G N ++++G E R+ NP+TF G Sbjct: 198 ALGAGISDGLGYGDNAKAALMTRGMAEITRLGVAVGSNPQTFYGLTG 244
>NF2L1_HUMAN (Q14494) Nuclear factor erythroid 2-related factor 1 (NF-E2-related| factor 1) (NFE2-related factor 1) (Nuclear factor, erythroid derived 2, like 1) (Transcription factor 11) (Transcription factor HBZ17) (Transcription factor LCR-F1) (Locus co Length = 772 Score = 28.5 bits (62), Expect = 8.4 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +1 Query: 334 PLPKSLKIPARIASATSAIPSSLERPSLYFN 426 P ++ + PA I+S T A+PS E P+L N Sbjct: 265 PFGENAEFPADISSITEAVPSESEPPALQNN 295 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,705,729 Number of Sequences: 219361 Number of extensions: 1344467 Number of successful extensions: 3956 Number of sequences better than 10.0: 44 Number of HSP's better than 10.0 without gapping: 3875 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3953 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2851757076 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
