>HSP1_ALLMI (Q7LZB6) Sperm protamine P1-type (Protamine II)|
          Length = 56

 Score = 32.7 bits (73), Expect = 0.56
 Identities = 22/52 (42%), Positives = 28/52 (53%)
 Frame = +3

Query: 261 RHRRQWHLGQVGDGRHRRQWHLGQVGDGRHRRQRHVRHAGDGRHRQRRHARH 416
           R RR+ H G    GR+RR+   G+ G  RH R  H R     R R+RR +RH
Sbjct: 15  RRRRRGHRG----GRYRRRRRRGRYGHRRHHR-GHSR-----RRRKRRRSRH 56

>PG03_MYCTU (P56877) Hypothetical PE-PGRS family protein PE_PGRS3 precursor|
          Length = 957

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 22/51 (43%), Positives = 23/51 (45%), Gaps = 8/51 (15%)
 Frame = +3

Query: 285  GQVGDG-------RHRRQ-WHLGQVGDGRHRRQRHVRHAGDGRHRQRRHAR 413
            G  GDG       R+RRQ W   Q    R RRQR  R    G  R RRH R
Sbjct: 873  GNGGDGGCRRVWRRYRRQRWCRRQRRADRQRRQRRQRRQSRGHARCRRHRR 923

>DHN4_HORVU (P12949) Dehydrin DHN4 (B18)|
          Length = 225

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 13/58 (22%)
 Frame = +3

Query: 258 GRHRRQWHLGQVG----DGRHRRQWHLGQVGDGRH---------RRQRHVRHAGDGRH 392
           G + +Q H G  G    DG + +Q H G  G G H          +Q H    G G H
Sbjct: 117 GTYGQQGHTGMTGMGATDGTYGQQGHTGMAGTGAHGTAATGGTYGQQGHTGMTGTGMH 174

>CAC1A_HUMAN (O00555) Voltage-dependent P/Q-type calcium channel alpha-1A subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.1)
            (Calcium channel, L type, alpha-1 polypeptide isoform 4)
            (Brain calcium channel I) (BI)
          Length = 2505

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 18/46 (39%), Positives = 22/46 (47%)
 Frame = +3

Query: 285  GQVGDGRHRRQWHLGQVGDGRHRRQRHVRHAGDGRHRQRRHARHCG 422
            G+ GD  HRR  H+ + G  R  R    R   DG HR+ R  R  G
Sbjct: 924  GKAGDP-HRR--HVHRQGGSRESRSGSPRTGADGEHRRHRAHRRPG 966


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,079,141
Number of Sequences: 219361
Number of extensions: 814292
Number of successful extensions: 2306
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2244
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)