ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32h03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186256.1| Oryza sativa (japonica cultivar-group), mRNA 60 7e-06
2ref|XM_476609.1| Oryza sativa (japonica cultivar-group), mRNA 60 7e-06
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
4dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic D... 60 7e-06
5dbj|AK108823.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 7e-06
6ref|NM_186254.2| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
7dbj|AK108897.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
8gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 44 0.43
9emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid compl... 44 0.43
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.7
11gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.7
12emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 i... 42 1.7
13gb|AC091849.2| Homo sapiens chromosome 5 clone CTD-2245E15, comp... 42 1.7
14emb|AL159168.15| Human DNA sequence from clone RP11-401H23 on ch... 42 1.7
15gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell... 42 1.7
16gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 geno... 42 1.7
17dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
18dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
19gb|BC089772.1| Rattus norvegicus mitogen activated protein kinas... 42 1.7
20emb|Z16415.1|RNMAPKK R.norvegicus mRNA for MAP kinase kinase 42 1.7
21gb|AE003430.4| Drosophila melanogaster chromosome X, section 14 ... 42 1.7
22ref|NM_031643.3| Rattus norvegicus mitogen activated protein kin... 42 1.7
23gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
24emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.7
25dbj|D13341.1|RATMAPKKA Rattus norvegicus mRNA for MAP kinase kin... 42 1.7
26gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 6.8
27ref|NM_185007.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.8
28gb|BT011431.1| Drosophila melanogaster RH64806 full insert cDNA 40 6.8
29gb|AC093141.2| Felis catus clone RP86-512F4, complete sequence 40 6.8
30emb|AL358785.10| Human DNA sequence from clone RP11-245E14 on ch... 40 6.8
31emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 6.8
32gb|AC155256.2| Mus musculus BAC clone RP24-142I9 from chromosome... 40 6.8
33gb|AC104702.2| Drosophila melanogaster 3L BAC RP98-11B4 (Roswell... 40 6.8
34gb|AC010115.6| Drosophila melanogaster 3L BAC RP98-16I16 (Roswel... 40 6.8
35ref|NM_139839.3| Drosophila melanogaster unc-13-4A CG32381-RA (u... 40 6.8
36gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.8
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
38dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
39gb|AC108491.4| Homo sapiens BAC clone RP11-138I17 from 4, comple... 40 6.8
40gb|AC074224.3|AC074224 Mus musculus strain C57BL6/J chromosome 2... 40 6.8
41gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7... 40 6.8
42dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.8
43dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
44dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.8
45dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
46dbj|AK070713.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
47gb|AE003559.3| Drosophila melanogaster chromosome 3L, section 26... 40 6.8
48emb|AL928590.10| Mouse DNA sequence from clone RP23-26A12 on chr... 40 6.8
49gb|AC128697.4| Mus musculus BAC clone RP24-388P9 from 12, comple... 40 6.8
50gb|AC165349.2| Mus musculus BAC clone RP23-212M22 from chromosom... 40 6.8 
>ref|NM_186256.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 507

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                       
Query: 298 acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 357
           ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 470 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 411

                             
Query: 358 agcggcacgttaggcacg 375
           |||| ||| || ||||||
Sbjct: 410 agcgtcaccttcggcacg 393



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 224 tcggcggcagcggcaccttgggcacgccaggaacggacggcatcggaggca 274
           |||||||||||| ||||||||||||| | || |  ||||||||||| ||||
Sbjct: 460 tcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggca 410



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 224 tcggcggcagcggcaccttgggcacg 249
           |||||||||||| |||||||||||||
Sbjct: 274 tcggcggcagcgccaccttgggcacg 249



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 217 gacggcgtcggcggcagcggcaccttgggcacg 249
           |||||| |||||||||||| |||||| ||||||
Sbjct: 425 gacggcatcggcggcagcgtcaccttcggcacg 393



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 256 acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 315
           ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 470 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 411

                           
Query: 316 agtggcaccttgggca 331
           || | |||||| ||||
Sbjct: 410 agcgtcaccttcggca 395



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 304 ggcatcggcggcagtggcaccttgggca 331
           |||||||||||||| | |||||||||||
Sbjct: 278 ggcatcggcggcagcgccaccttgggca 251
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>ref|XM_476609.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 858

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                       
Query: 298 acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 357
           ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 597 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 538

                             
Query: 358 agcggcacgttaggcacg 375
           |||| ||| || ||||||
Sbjct: 537 agcgtcaccttcggcacg 520



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 224 tcggcggcagcggcaccttgggcacgccaggaacggacggcatcggaggca 274
           |||||||||||| ||||||||||||| | || |  ||||||||||| ||||
Sbjct: 587 tcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggca 537



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 217 gacggcgtcggcggcagcggcaccttgggcacg 249
           |||||| |||||||||||| |||||| ||||||
Sbjct: 552 gacggcatcggcggcagcgtcaccttcggcacg 520



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 256 acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 315
           ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 597 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 538

                           
Query: 316 agtggcaccttgggca 331
           || | |||||| ||||
Sbjct: 537 agcgtcaccttcggca 522
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                           
Query: 298     acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 357
               ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 2214519 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 2214460

                                 
Query: 358     agcggcacgttaggcacg 375
               |||| ||| || ||||||
Sbjct: 2214459 agcgtcaccttcggcacg 2214442



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                           
Query: 298     acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 357
               ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 2212384 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 2212325

                                 
Query: 358     agcggcacgttaggcacg 375
               |||| ||| || ||||||
Sbjct: 2212324 agcgtcaccttcggcacg 2212307



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                           
Query: 298     acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 357
               ||||| |||||||||||||| | |||||||||||   | || || |||||||| ||||||
Sbjct: 2209517 acggatggcatcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggc 2209458

                                 
Query: 358     agcggcacgttaggcacg 375
               |||| ||| || ||||||
Sbjct: 2209457 agcgtcaccttcggcacg 2209440



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 304     ggcatcggcggcagtggcaccttgggca 331
               |||||||||||||||| |||||||||||
Sbjct: 2209301 ggcatcggcggcagtgccaccttgggca 2209274



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 224     tcggcggcagcggcaccttgggcacgccaggaacggacggcatcggaggca 274
               |||||||||||| ||||||||||||| | || |  ||||||||||| ||||
Sbjct: 2214509 tcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggca 2214459



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 224     tcggcggcagcggcaccttgggcacgccaggaacggacggcatcggaggca 274
               |||||||||||| ||||||||||||| | || |  ||||||||||| ||||
Sbjct: 2212374 tcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggca 2212324



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                  
Query: 224     tcggcggcagcggcaccttgggcacgccaggaacggacggcatcggaggca 274
               |||||||||||| ||||||||||||  | ||||  ||||||||||| ||||
Sbjct: 2209507 tcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggca 2209457



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 224     tcggcggcagcggcaccttgggcacg 249
               |||||||||||| |||||||||||||
Sbjct: 2214323 tcggcggcagcgccaccttgggcacg 2214298



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 217     gacggcgtcggcggcagcggcaccttgggcacg 249
               |||||| |||||||||||| |||||| ||||||
Sbjct: 2214474 gacggcatcggcggcagcgtcaccttcggcacg 2214442



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 217     gacggcgtcggcggcagcggcaccttgggcacg 249
               |||||| |||||||||||| |||||| ||||||
Sbjct: 2212339 gacggcatcggcggcagcgtcaccttcggcacg 2212307



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                
Query: 217     gacggcgtcggcggcagcggcaccttgggcacg 249
               |||||| |||||||||||| |||||| ||||||
Sbjct: 2209472 gacggcatcggcggcagcgtcaccttcggcacg 2209440



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                           
Query: 256     acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 315
               ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 2214519 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 2214460

                               
Query: 316     agtggcaccttgggca 331
               || | |||||| ||||
Sbjct: 2214459 agcgtcaccttcggca 2214444



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 304     ggcatcggcggcagtggcaccttgggca 331
               |||||||||||||| | |||||||||||
Sbjct: 2214327 ggcatcggcggcagcgccaccttgggca 2214300



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                           
Query: 256     acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 315
               ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 2212384 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 2212325

                               
Query: 316     agtggcaccttgggca 331
               || | |||||| ||||
Sbjct: 2212324 agcgtcaccttcggca 2212309
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>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1351_C05
          Length = 112465

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 298   acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 357
             ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 82421 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 82362

                               
Query: 358   agcggcacgttaggcacg 375
             |||| ||| || ||||||
Sbjct: 82361 agcgtcaccttcggcacg 82344



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                         
Query: 298   acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 357
             ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 80286 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 80227

                               
Query: 358   agcggcacgttaggcacg 375
             |||| ||| || ||||||
Sbjct: 80226 agcgtcaccttcggcacg 80209



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                         
Query: 298   acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 357
             ||||| |||||||||||||| | |||||||||||   | || || |||||||| ||||||
Sbjct: 77419 acggatggcatcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggc 77360

                               
Query: 358   agcggcacgttaggcacg 375
             |||| ||| || ||||||
Sbjct: 77359 agcgtcaccttcggcacg 77342



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                         
Query: 304   ggcatcggcggcagtggcaccttgggca 331
             |||||||||||||||| |||||||||||
Sbjct: 77203 ggcatcggcggcagtgccaccttgggca 77176



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 224   tcggcggcagcggcaccttgggcacgccaggaacggacggcatcggaggca 274
             |||||||||||| ||||||||||||| | || |  ||||||||||| ||||
Sbjct: 82411 tcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggca 82361



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 224   tcggcggcagcggcaccttgggcacgccaggaacggacggcatcggaggca 274
             |||||||||||| ||||||||||||| | || |  ||||||||||| ||||
Sbjct: 80276 tcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggca 80226



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 224   tcggcggcagcggcaccttgggcacgccaggaacggacggcatcggaggca 274
             |||||||||||| ||||||||||||  | ||||  ||||||||||| ||||
Sbjct: 77409 tcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggca 77359



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 224   tcggcggcagcggcaccttgggcacg 249
             |||||||||||| |||||||||||||
Sbjct: 82225 tcggcggcagcgccaccttgggcacg 82200



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 217   gacggcgtcggcggcagcggcaccttgggcacg 249
             |||||| |||||||||||| |||||| ||||||
Sbjct: 82376 gacggcatcggcggcagcgtcaccttcggcacg 82344



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 217   gacggcgtcggcggcagcggcaccttgggcacg 249
             |||||| |||||||||||| |||||| ||||||
Sbjct: 80241 gacggcatcggcggcagcgtcaccttcggcacg 80209



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 217   gacggcgtcggcggcagcggcaccttgggcacg 249
             |||||| |||||||||||| |||||| ||||||
Sbjct: 77374 gacggcatcggcggcagcgtcaccttcggcacg 77342



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                         
Query: 256   acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 315
             ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 82421 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 82362

                             
Query: 316   agtggcaccttgggca 331
             || | |||||| ||||
Sbjct: 82361 agcgtcaccttcggca 82346



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 304   ggcatcggcggcagtggcaccttgggca 331
             |||||||||||||| | |||||||||||
Sbjct: 82229 ggcatcggcggcagcgccaccttgggca 82202



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                         
Query: 256   acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 315
             ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 80286 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 80227

                             
Query: 316   agtggcaccttgggca 331
             || | |||||| ||||
Sbjct: 80226 agcgtcaccttcggca 80211
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>dbj|AK108823.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-F04, full
           insert sequence
          Length = 858

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                       
Query: 298 acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 357
           ||||| |||||||||||||| | ||||||||||| | | || || |||||||| ||||||
Sbjct: 597 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 538

                             
Query: 358 agcggcacgttaggcacg 375
           |||| ||| || ||||||
Sbjct: 537 agcgtcaccttcggcacg 520



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 224 tcggcggcagcggcaccttgggcacgccaggaacggacggcatcggaggca 274
           |||||||||||| ||||||||||||| | || |  ||||||||||| ||||
Sbjct: 587 tcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggca 537



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 217 gacggcgtcggcggcagcggcaccttgggcacg 249
           |||||| |||||||||||| |||||| ||||||
Sbjct: 552 gacggcatcggcggcagcgtcaccttcggcacg 520



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 62/76 (81%)
 Strand = Plus / Minus

                                                                       
Query: 256 acggacggcatcggaggcaatggcaccttgggcaggtcggggacggacggcatcggcggc 315
           ||||| |||||||| ||||  | ||||||||||| | | || |  |||||||||||||||
Sbjct: 597 acggatggcatcggcggcagcgtcaccttgggcacggccggcatcgacggcatcggcggc 538

                           
Query: 316 agtggcaccttgggca 331
           || | |||||| ||||
Sbjct: 537 agcgtcaccttcggca 522
to top
>ref|NM_186254.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 817

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                       
Query: 298 acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 357
           ||||| |||||||||||||| | |||||||||||   | || || |||||||| ||||||
Sbjct: 542 acggatggcatcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggc 483

                             
Query: 358 agcggcacgttaggcacg 375
           |||| ||| || ||||||
Sbjct: 482 agcgtcaccttcggcacg 465



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 304 ggcatcggcggcagtggcaccttgggca 331
           |||||||||||||||| |||||||||||
Sbjct: 326 ggcatcggcggcagtgccaccttgggca 299



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 224 tcggcggcagcggcaccttgggcacgccaggaacggacggcatcggaggca 274
           |||||||||||| ||||||||||||  | ||||  ||||||||||| ||||
Sbjct: 532 tcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggca 482



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 217 gacggcgtcggcggcagcggcaccttgggcacg 249
           |||||| |||||||||||| |||||| ||||||
Sbjct: 497 gacggcatcggcggcagcgtcaccttcggcacg 465
to top
>dbj|AK108897.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-F01, full
           insert sequence
          Length = 817

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                       
Query: 298 acggacggcatcggcggcagtggcaccttgggcaggtcggggatggacggcataggcggc 357
           ||||| |||||||||||||| | |||||||||||   | || || |||||||| ||||||
Sbjct: 542 acggatggcatcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggc 483

                             
Query: 358 agcggcacgttaggcacg 375
           |||| ||| || ||||||
Sbjct: 482 agcgtcaccttcggcacg 465



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                       
Query: 304 ggcatcggcggcagtggcaccttgggca 331
           |||||||||||||||| |||||||||||
Sbjct: 326 ggcatcggcggcagtgccaccttgggca 299



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 224 tcggcggcagcggcaccttgggcacgccaggaacggacggcatcggaggca 274
           |||||||||||| ||||||||||||  | ||||  ||||||||||| ||||
Sbjct: 532 tcggcggcagcgtcaccttgggcaccgccggaatcgacggcatcggcggca 482



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 217 gacggcgtcggcggcagcggcaccttgggcacg 249
           |||||| |||||||||||| |||||| ||||||
Sbjct: 497 gacggcatcggcggcagcgtcaccttcggcacg 465
to top
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 215    cagacggcgtcggcggcagcggcacc 240
              |||||||||| |||||||||||||||
Sbjct: 145396 cagacggcgttggcggcagcggcacc 145421
to top
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence
          Length = 2094509

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 225     cggcggcagcggcaccttgggc 246
               ||||||||||||||||||||||
Sbjct: 1402469 cggcggcagcggcaccttgggc 1402448
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 337      gggatggacggcataggcggcagcg 361
                |||||||||||||| ||||||||||
Sbjct: 32124593 gggatggacggcatcggcggcagcg 32124569



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 297      gacggacggcatcggcggcagtgg 320
                ||||||||||||||||||| ||||
Sbjct: 32122216 gacggacggcatcggcggctgtgg 32122193
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 438     cggcgcagtgggcacggtcgg 458
               |||||||||||||||||||||
Sbjct: 2844844 cggcgcagtgggcacggtcgg 2844824
to top
>emb|BX914197.15| Zebrafish DNA sequence from clone DKEYP-81F11 in linkage group 11,
            complete sequence
          Length = 198600

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 103  gcagtttcatcacactcgtga 123
            |||||||||||||||||||||
Sbjct: 3565 gcagtttcatcacactcgtga 3585
to top
>gb|AC091849.2| Homo sapiens chromosome 5 clone CTD-2245E15, complete sequence
          Length = 131371

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 34    cacaggtgctgctcaaacgaa 54
             |||||||||||||||||||||
Sbjct: 59909 cacaggtgctgctcaaacgaa 59889
to top
>emb|AL159168.15| Human DNA sequence from clone RP11-401H23 on chromosome 9 Contains a
             the 3' end of a novel gene (KIAA0368),  the gene for
             KIAA1962 protein similar to zinc finger protein HIT-10 and
             a CpG island, complete sequence
          Length = 129010

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 214   acagacggcgtcggcggcagcggca 238
             |||||||||| ||||||||||||||
Sbjct: 55582 acagacggcggcggcggcagcggca 55558
to top
>gb|AC105352.2| Drosophila melanogaster X BAC RP98-45O17 (Roswell Park Cancer
            Institute Drosophila BAC Library) complete sequence
          Length = 172784

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 52   gaatactatcaagttaaagta 72
            |||||||||||||||||||||
Sbjct: 2192 gaatactatcaagttaaagta 2212
to top
>gb|AC084320.10| Oryza sativa chromosome 3 BAC OSJNBa0091J19 genomic sequence, complete
              sequence
          Length = 178158

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 337    gggatggacggcataggcggcagcg 361
              |||||||||||||| ||||||||||
Sbjct: 125718 gggatggacggcatcggcggcagcg 125694



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 297    gacggacggcatcggcggcagtgg 320
              ||||||||||||||||||| ||||
Sbjct: 123341 gacggacggcatcggcggctgtgg 123318
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 217     gacggcgtcggcggcagcggc 237
               |||||||||||||||||||||
Sbjct: 8677548 gacggcgtcggcggcagcggc 8677568
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 337      gggatggacggcataggcggcagcg 361
                |||||||||||||| ||||||||||
Sbjct: 32215105 gggatggacggcatcggcggcagcg 32215081



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 297      gacggacggcatcggcggcagtgg 320
                ||||||||||||||||||| ||||
Sbjct: 32212728 gacggacggcatcggcggctgtgg 32212705
to top
>gb|BC089772.1| Rattus norvegicus mitogen activated protein kinase kinase 1, mRNA
            (cDNA clone MGC:108573 IMAGE:7382030), complete cds
          Length = 2145

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 53   aatactatcaagttaaagtaa 73
            |||||||||||||||||||||
Sbjct: 2102 aatactatcaagttaaagtaa 2122
to top
>emb|Z16415.1|RNMAPKK R.norvegicus mRNA for MAP kinase kinase
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 53   aatactatcaagttaaagtaa 73
            |||||||||||||||||||||
Sbjct: 2090 aatactatcaagttaaagtaa 2110
to top
>gb|AE003430.4| Drosophila melanogaster chromosome X, section 14 of 74 of the complete
              sequence
          Length = 296227

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 52     gaatactatcaagttaaagta 72
              |||||||||||||||||||||
Sbjct: 135884 gaatactatcaagttaaagta 135864
to top
>ref|NM_031643.3| Rattus norvegicus mitogen activated protein kinase kinase 1 (Map2k1),
            mRNA
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 53   aatactatcaagttaaagtaa 73
            |||||||||||||||||||||
Sbjct: 2090 aatactatcaagttaaagtaa 2110
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 217     gacggcgtcggcggcagcggc 237
               |||||||||||||||||||||
Sbjct: 8677431 gacggcgtcggcggcagcggc 8677451
to top
>emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa0036A15 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 195500

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 217    gacggcgtcggcggcagcggc 237
              |||||||||||||||||||||
Sbjct: 164621 gacggcgtcggcggcagcggc 164601
to top
>dbj|D13341.1|RATMAPKKA Rattus norvegicus mRNA for MAP kinase kinase, complete cds
          Length = 2136

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 53   aatactatcaagttaaagtaa 73
            |||||||||||||||||||||
Sbjct: 2090 aatactatcaagttaaagtaa 2110
to top
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 467     cgccgggtactgccggcagc 486
               ||||||||||||||||||||
Sbjct: 1929468 cgccgggtactgccggcagc 1929449
to top
>ref|NM_185007.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 849

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 gacggacggcatcggcggcagtgg 320
           ||||||||||||||||||| ||||
Sbjct: 432 gacggacggcatcggcggctgtgg 409
to top
>gb|BT011431.1| Drosophila melanogaster RH64806 full insert cDNA
          Length = 5079

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 219  cggcgtcggcggcagcggca 238
            ||||||||||||||||||||
Sbjct: 1132 cggcgtcggcggcagcggca 1113
to top
>gb|AC093141.2| Felis catus clone RP86-512F4, complete sequence
          Length = 119353

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 325   ttgggcaggtcggggatgga 344
             ||||||||||||||||||||
Sbjct: 53165 ttgggcaggtcggggatgga 53184
to top
>emb|AL358785.10| Human DNA sequence from clone RP11-245E14 on chromosome 6 Contains
            the 3' end of the gene for a novel protein similar to
            zinc finger protein 306 (ZNF306, ZFP47), the 3' end of
            gene KIAA0426, ESTs, STSs and GSSs, complete sequence
          Length = 17464

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 67   aaagtaaccatatggtttat 86
            ||||||||||||||||||||
Sbjct: 5195 aaagtaaccatatggtttat 5176
to top
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    ggcacggccggcacaccggg 212
              ||||||||||||||||||||
Sbjct: 208545 ggcacggccggcacaccggg 208564
to top
>gb|AC155256.2| Mus musculus BAC clone RP24-142I9 from chromosome 12, complete sequence
          Length = 163949

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   cggcgtcggcggcagcggca 238
             ||||||||||||||||||||
Sbjct: 37232 cggcgtcggcggcagcggca 37213
to top
>gb|AC104702.2| Drosophila melanogaster 3L BAC RP98-11B4 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 153146

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   cggcgtcggcggcagcggca 238
             ||||||||||||||||||||
Sbjct: 20720 cggcgtcggcggcagcggca 20739
to top
>gb|AC010115.6| Drosophila melanogaster 3L BAC RP98-16I16 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 180821

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   cggcgtcggcggcagcggca 238
             ||||||||||||||||||||
Sbjct: 34710 cggcgtcggcggcagcggca 34691
to top
>ref|NM_139839.3| Drosophila melanogaster unc-13-4A CG32381-RA (unc-13-4A), mRNA
          Length = 5063

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 219  cggcgtcggcggcagcggca 238
            ||||||||||||||||||||
Sbjct: 1132 cggcgtcggcggcagcggca 1113
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 253     ggaacggacggcatcggaggcaat 276
               |||||||||||||||| |||||||
Sbjct: 2537295 ggaacggacggcatcgaaggcaat 2537318
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 218     acggcgtcggcggcagcggc 237
               ||||||||||||||||||||
Sbjct: 9853267 acggcgtcggcggcagcggc 9853286
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 62       aagttaaagtaaccatatgg 81
                ||||||||||||||||||||
Sbjct: 14231804 aagttaaagtaaccatatgg 14231823
to top
>gb|AC108491.4| Homo sapiens BAC clone RP11-138I17 from 4, complete sequence
          Length = 133452

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 268   ggaggcaatggcaccttggg 287
             ||||||||||||||||||||
Sbjct: 85256 ggaggcaatggcaccttggg 85237
to top
>gb|AC074224.3|AC074224 Mus musculus strain C57BL6/J chromosome 2 clone RP23-43C3, complete
             sequence
          Length = 188989

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 315   cagtggcaccttgggcaggt 334
             ||||||||||||||||||||
Sbjct: 99093 cagtggcaccttgggcaggt 99074
to top
>gb|AC005678.1|AC005678 Homo sapiens PAC clone RP11-569I24 from 7, complete sequence
          Length = 187543

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    aaagtaaccatatggtttat 86
             ||||||||||||||||||||
Sbjct: 32866 aaagtaaccatatggtttat 32847
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 372     cacgccggggacggacggca 391
               ||||||||||||||||||||
Sbjct: 7113216 cacgccggggacggacggca 7113235
to top
>dbj|AP005007.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0521F09
          Length = 164823

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 218   acggcgtcggcggcagcggc 237
             ||||||||||||||||||||
Sbjct: 34229 acggcgtcggcggcagcggc 34248
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 481     ggcagcggcaccgtcggcac 500
               ||||||||||||||||||||
Sbjct: 1522624 ggcagcggcaccgtcggcac 1522643
to top
>dbj|AP002870.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0458A05
          Length = 120593

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    aagttaaagtaaccatatgg 81
             ||||||||||||||||||||
Sbjct: 27494 aagttaaagtaaccatatgg 27513
to top
>dbj|AK070713.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063G16, full
           insert sequence
          Length = 1148

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 297 gacggacggcatcggcggcagtgg 320
           ||||||||||||||||||| ||||
Sbjct: 493 gacggacggcatcggcggctgtgg 470
to top
>gb|AE003559.3| Drosophila melanogaster chromosome 3L, section 26 of 83 of the complete
             sequence
          Length = 269948

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 219   cggcgtcggcggcagcggca 238
             ||||||||||||||||||||
Sbjct: 65272 cggcgtcggcggcagcggca 65291
to top
>emb|AL928590.10| Mouse DNA sequence from clone RP23-26A12 on chromosome 2, complete
              sequence
          Length = 171007

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 315    cagtggcaccttgggcaggt 334
              ||||||||||||||||||||
Sbjct: 149577 cagtggcaccttgggcaggt 149596
to top
>gb|AC128697.4| Mus musculus BAC clone RP24-388P9 from 12, complete sequence
          Length = 169780

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 219    cggcgtcggcggcagcggca 238
              ||||||||||||||||||||
Sbjct: 116628 cggcgtcggcggcagcggca 116609
to top
>gb|AC165349.2| Mus musculus BAC clone RP23-212M22 from chromosome 12, complete
             sequence
          Length = 199483

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   cggcgtcggcggcagcggca 238
             ||||||||||||||||||||
Sbjct: 11113 cggcgtcggcggcagcggca 11094


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,966,966
Number of Sequences: 3902068
Number of extensions: 2966966
Number of successful extensions: 72641
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71450
Number of HSP's gapped (non-prelim): 1180
length of query: 501
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 479
effective length of database: 17,147,199,772
effective search space: 8213508690788
effective search space used: 8213508690788
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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