ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart32g11 |
|---|---|
| Clone Library Name | barley_pub |
>GSTF6_ARATH (Q96266) Glutathione S-transferase 6 (EC 2.5.1.18) (GST class phi)| Length = 215 Score = 37.0 bits (84), Expect = 0.022 Identities = 15/41 (36%), Positives = 26/41 (63%) Frame = -3 Query: 438 HYIAGSQRGRKLFTSKKHVARWYDAISSRPSWKQVVKMQHE 316 HY+ G+ + LF S+ V+ W IS+RP+W +V+ +Q + Sbjct: 176 HYLLGTD-SKVLFDSRPKVSEWIKKISARPAWAKVIDLQKQ 215
>GSTF3_ARATH (P42761) Glutathione S-transferase ERD13 (EC 2.5.1.18) (GST| class-phi) Length = 214 Score = 37.0 bits (84), Expect = 0.022 Identities = 15/34 (44%), Positives = 21/34 (61%) Frame = -3 Query: 435 YIAGSQRGRKLFTSKKHVARWYDAISSRPSWKQV 334 Y+ G L +KHV+ W+D ISSR +WK+V Sbjct: 173 YLVGPIGKAHLIKDRKHVSAWWDKISSRAAWKEV 206
>GSTF_SILCU (Q04522) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| Length = 216 Score = 35.8 bits (81), Expect = 0.049 Identities = 15/40 (37%), Positives = 26/40 (65%) Frame = -3 Query: 435 YIAGSQRGRKLFTSKKHVARWYDAISSRPSWKQVVKMQHE 316 Y+ G+Q +KLF + HV+ W I +RPSW++ + +Q + Sbjct: 177 YLMGTQV-KKLFEERAHVSAWCKKILARPSWEKTLALQKQ 215
>GSTF7_ARATH (Q96324) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| Length = 214 Score = 34.7 bits (78), Expect = 0.11 Identities = 13/37 (35%), Positives = 26/37 (70%) Frame = -3 Query: 435 YIAGSQRGRKLFTSKKHVARWYDAISSRPSWKQVVKM 325 YI L TS++++ RW++ IS+RP+WK+++++ Sbjct: 175 YIMNETSLSGLVTSRENLNRWWNEISARPAWKKLMEL 211
>SCNAA_HUMAN (P37088) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 669 Score = 32.3 bits (72), Expect = 0.54 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 126 EALIKARRVSRYVFHF-CNAIVLHGVVTLSCFQFNK 22 EALI+ R R +F F CN +HG + L C Q N+ Sbjct: 46 EALIEFHRSYRELFEFFCNNTTIHGAIRLVCSQHNR 81
>SCNNA_BOVIN (P55270) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 650 Score = 31.6 bits (70), Expect = 0.91 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 126 EALIKARRVSRYVFHF-CNAIVLHGVVTLSCFQFNK 22 EAL++ R R +F F CN +HG + L C Q N+ Sbjct: 26 EALLEFHRSYRELFEFFCNNTTIHGAIRLVCSQHNR 61
>GST11_ARATH (Q9SRY5) Glutathione S-transferase 11 (EC 2.5.1.18) (GST class-phi)| Length = 209 Score = 31.6 bits (70), Expect = 0.91 Identities = 15/35 (42%), Positives = 23/35 (65%) Frame = -3 Query: 435 YIAGSQRGRKLFTSKKHVARWYDAISSRPSWKQVV 331 Y+ G+ +KLF + HV+ W I+SRPS K+V+ Sbjct: 176 YLLGTPT-KKLFAERPHVSAWVADITSRPSAKKVL 209
>SCNAA_RAT (P37089) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 698 Score = 30.8 bits (68), Expect = 1.6 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 126 EALIKARRVSRYVFHF-CNAIVLHGVVTLSCFQFNK 22 EALI+ R R +F F CN +HG + L C + N+ Sbjct: 71 EALIEFHRSYRELFQFFCNNTTIHGAIRLVCSKHNR 106
>SCNAA_MOUSE (Q61180) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 699 Score = 30.8 bits (68), Expect = 1.6 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 126 EALIKARRVSRYVFHF-CNAIVLHGVVTLSCFQFNK 22 EALI+ R R +F F CN +HG + L C + N+ Sbjct: 71 EALIEFHRSYRELFQFFCNNTTIHGAIRLVCSKHNR 106
>SCNNA_CAVPO (Q9R1N2) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 682 Score = 30.8 bits (68), Expect = 1.6 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 126 EALIKARRVSRYVFHF-CNAIVLHGVVTLSCFQFNK 22 EALI+ R R +F F CN +HG + L C + N+ Sbjct: 72 EALIEFHRSYRELFQFFCNNTTIHGAIRLVCSKHNR 107
>SCNAA_RABIT (O97741) Amiloride-sensitive sodium channel alpha-subunit| (Epithelial Na+ channel alpha subunit) (Alpha ENaC) (Nonvoltage-gated sodium channel 1 alpha subunit) (SCNEA) (Alpha NaCH) Length = 640 Score = 30.8 bits (68), Expect = 1.6 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 126 EALIKARRVSRYVFHF-CNAIVLHGVVTLSCFQFNK 22 EALI+ R R +F F CN +HG + L C + N+ Sbjct: 26 EALIEFHRSYRELFQFFCNNTTIHGAIRLVCSKHNR 61
>GSTF_HYOMU (P46423) Glutathione S-transferase (EC 2.5.1.18) (GST class-phi)| (25 kDa auxin-binding protein) Length = 212 Score = 30.8 bits (68), Expect = 1.6 Identities = 12/37 (32%), Positives = 24/37 (64%) Frame = -3 Query: 438 HYIAGSQRGRKLFTSKKHVARWYDAISSRPSWKQVVK 328 +Y+ G+ + + LF S+ HV+ W I +RP+W + ++ Sbjct: 174 NYLMGT-KVKSLFDSRPHVSAWCADILARPAWSKAIE 209
>SC24A_MOUSE (Q3U2P1) Protein transport protein Sec24A (SEC24-related protein A)| Length = 1090 Score = 29.6 bits (65), Expect = 3.5 Identities = 24/99 (24%), Positives = 44/99 (44%), Gaps = 3/99 (3%) Frame = -2 Query: 421 PEGQEALHLQEARGQVVRRHLQPPLLEAGGQDAARAPRHLRVIGELDRSPSV---RTSSI 251 PEG ++L + R + LQPP+ P L I +L+ +P + +S+ Sbjct: 342 PEGLRVVNLLQERNMLPSTPLQPPV-----------PNLLEDIQKLNCNPELFRCTLTSV 390 Query: 250 GSMHACMHESSIGLHTVMSPYAVKVPLVYVRSFVVVLAR 134 A ++++ + L ++ P+ V L V S +V R Sbjct: 391 PQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCR 429
>GSTF1_ARATH (P42760) Glutathione S-transferase 1 (EC 2.5.1.18) (GST class-phi)| Length = 208 Score = 29.6 bits (65), Expect = 3.5 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = -3 Query: 435 YIAGSQRGRKLFTSKKHVARWYDAISSRPSWKQVV 331 Y+ G+ +KLF + HV+ W I+SRPS ++V+ Sbjct: 175 YLLGTPT-KKLFDERPHVSAWVADITSRPSAQKVL 208
>CATA_DEIRA (Q59337) Catalase (EC 1.11.1.6)| Length = 536 Score = 29.6 bits (65), Expect = 3.5 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%) Frame = -2 Query: 418 EGQEALHLQEARGQVVRRHLQPPLLEAGGQDAARAPRHL-RVIGELDRSPSVRTSSIG 248 +GQ A + GQ R + +P LL + RAP H RV G L R+ R + G Sbjct: 399 DGQMAYRVDTFEGQDQRVNYEPSLLSGPKEAPRRAPEHTPRVEGNLVRAAIERPNPFG 456
>RCNA_SALTY (Q8ZM94) Nickel/cobalt efflux system rcnA| Length = 288 Score = 29.3 bits (64), Expect = 4.5 Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 11/78 (14%) Frame = +2 Query: 83 WKT*RETRRALIRASHYSSQHDNERT-DVD---ERDLDGVRRHHG-VKPDG------RFM 229 W+T R ++ L H+ HD++ D D + D D HHG + P+G + Sbjct: 107 WRTWRGEQQWLAGNHHHDHDHDHDHDHDHDHDHDHDHDHDHDHHGHIHPEGATSKAYQDA 166 Query: 230 HACMHAADRRRTYGRRSI 283 H HAAD +R + +++ Sbjct: 167 HERAHAADIQRRFDGQTV 184
>ZN236_HUMAN (Q9UL36) Zinc finger protein 236| Length = 1845 Score = 29.3 bits (64), Expect = 4.5 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +2 Query: 188 VRRHHGVKPDGRFMHACMHAADRRRTYGRRSIELADHSK 304 +R H GV+P AC H + RT G R +A H K Sbjct: 557 IRLHTGVRP-----FACPHCDKKFRTSGHRKTHIASHFK 590
>MATA_NEUCR (P19392) Mating-type protein A-1 (Mt A-1)| Length = 293 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/50 (30%), Positives = 24/50 (48%) Frame = +2 Query: 272 RRSIELADHSKVPGCSCCILTTCFQEGRLEMASYHLATCFLEVKSFLPLW 421 R ++ L H+ P C+LT C + G L +A+ H L S+ +W Sbjct: 146 RTALPLVQHNLQPMNGLCLLTKCLESG-LPLANPHSVIAKLSDPSYDMIW 194 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,503,723 Number of Sequences: 219361 Number of extensions: 973133 Number of successful extensions: 3044 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 2961 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3044 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
