ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32g05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.... 87 2e-17
2UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.... 87 2e-17
3UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.... 87 2e-17
4UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.... 87 2e-17
5UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.... 85 1e-16
6UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.... 84 2e-16
7GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (G... 50 4e-06
8FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.2... 48 1e-05
9GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (G... 47 2e-05
10FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.2... 44 2e-04
11GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-... 44 3e-04
12FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271) (GDP-... 43 4e-04
13FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.2... 42 0.001
14GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 39 0.008
15TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46) 38 0.014
16Y1055_METJA (Q58455) Hypothetical protein MJ1055 37 0.023
17ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA prote... 37 0.039
18ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA prote... 37 0.039
19ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA prote... 34 0.20
20ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA prote... 34 0.26
21Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF 34 0.26
22ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA prote... 34 0.26
23ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA prote... 33 0.33
24EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-ga... 33 0.33
25RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-... 33 0.57
26FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271) (GDP-4... 32 0.74
27ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA prote... 32 0.74
28ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA prote... 32 0.74
29ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA prote... 32 0.74
30ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA prote... 32 0.74
31ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA prote... 32 1.3
32Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL 31 1.7
33GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 31 1.7
34MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac... 31 2.2
35CINA_BACHK (Q6HF34) CinA-like protein 30 2.8
36CINA_BACCZ (Q636P5) CinA-like protein 30 2.8
37CINA_BACC1 (Q732U5) CinA-like protein 30 2.8
38CINA_BACAN (Q81WQ3) CinA-like protein 30 2.8
39RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination prote... 30 3.7
40FALZ_HUMAN (Q12830) Fetal Alzheimer antigen (Fetal Alz-50-reacti... 30 3.7
41ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA prote... 30 3.7
42TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3) 30 4.8
43TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3) 30 4.8
44CINA_BACCR (Q81A15) CinA-like protein 30 4.8
45SPSJ_BACSU (P39630) Spore coat polysaccharide biosynthesis prote... 30 4.8
46GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) ... 30 4.8
47GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galact... 30 4.8
48MUTL_VIBCH (Q9KV13) DNA mismatch repair protein mutL 30 4.8
49UVRC_BACSK (Q5WEK8) UvrABC system protein C (Protein uvrC) (Exci... 29 6.3
50KSGA_STRT2 (Q5M2L6) Dimethyladenosine transferase (EC 2.1.1.-) (... 29 8.2
51KSGA_STRT1 (Q5LY12) Dimethyladenosine transferase (EC 2.1.1.-) (... 29 8.2
52KSGA_STRMU (P59156) Dimethyladenosine transferase (EC 2.1.1.-) (... 29 8.2
53SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit 29 8.2 
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 43/95 (45%), Positives = 60/95 (63%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQ 323
           YV+D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       D P++
Sbjct: 301 YVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQK 360

Query: 322 RKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 218
           RKPDI KAK +L WEP V L +GL      FR+ L
Sbjct: 361 RKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
to top
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 43/95 (45%), Positives = 60/95 (63%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQ 323
           YV+D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       D P++
Sbjct: 301 YVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQK 360

Query: 322 RKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 218
           RKPDI KAK +L WEP V L +GL      FR+ L
Sbjct: 361 RKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
to top
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 43/95 (45%), Positives = 60/95 (63%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQ 323
           YV+D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       D P++
Sbjct: 301 YVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQK 360

Query: 322 RKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 218
           RKPDI KAK +L WEP V L +GL      FR+ L
Sbjct: 361 RKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
to top
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1)
          Length = 420

 Score = 87.4 bits (215), Expect = 2e-17
 Identities = 43/95 (45%), Positives = 60/95 (63%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQ 323
           YV+D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       D P++
Sbjct: 301 YVSDLVNGLVALMNSNVSSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQDDPQK 360

Query: 322 RKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 218
           RKPDI KAK +L WEP V L +GL      FR+ L
Sbjct: 361 RKPDIKKAKLMLGWEPVVPLEEGLNKAIHYFRKEL 395
to top
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 418

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 39/84 (46%), Positives = 56/84 (66%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQ 323
           YV+D+VNGL+ LMN + + P+N+GNP E T+LE A+ +K L+     +       D P++
Sbjct: 299 YVSDLVNGLVSLMNSNISSPVNLGNPEEHTILEFAQLIKSLVASRSHIQFLPEAQDDPQR 358

Query: 322 RKPDITKAKEVLDWEPKVVLRDGL 251
           R+PDI KAK +L WEP V L +GL
Sbjct: 359 RRPDIRKAKLLLGWEPVVPLEEGL 382
to top
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)|
           (UDP-glucuronate decarboxylase 1) (UXS-1)
          Length = 421

 Score = 84.0 bits (206), Expect = 2e-16
 Identities = 40/95 (42%), Positives = 61/95 (64%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQ 323
           YV+D+VNGL+ LMN + + P+N+GNP E ++++ A  +K+L+     ++      D P++
Sbjct: 302 YVSDLVNGLVALMNSNVSSPVNLGNPQEHSIVQFARLIKQLVGSGGEISFLSEAQDDPQR 361

Query: 322 RKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERL 218
           RKPDI KAK +L WEP V L +GL      FR+ L
Sbjct: 362 RKPDIRKAKLLLGWEPVVPLEEGLNKTIHYFRKEL 396
to top
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 2)
          Length = 371

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 34/105 (32%), Positives = 54/105 (51%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQ 323
           ++ + V G+++L   D   P+NIG+    +M E+AE V    N ++ +      P+  R 
Sbjct: 241 FIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIVLSFENKQLPIHHIPG-PEGVRG 299

Query: 322 RKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA*G 188
           R  D T  KE L W P + L+DGL +     +E+L   +K KA G
Sbjct: 300 RNSDNTLIKEKLGWAPTMRLKDGLRITYFWIKEQL---EKEKAEG 341
to top
>FCL1_ORYSA (Q67WR2) Probable GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1)
          Length = 328

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 1/101 (0%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNG-DNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPR 326
           +V D+ + ++ LM+       +N+G+  E T+ ELAE VKE++  +  +    + PD   
Sbjct: 229 HVDDLADAVIFLMDHYSGLEHVNVGSGSEVTIKELAELVKEVVGFQGKLVWDSSKPDGTP 288

Query: 325 QRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 203
           ++  D +K +E + W+PKV L++GLV     + E +   KK
Sbjct: 289 RKLMDSSKIQE-MGWKPKVPLKEGLVETYKWYVENVISAKK 328
to top
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase 1) (OsGME-1)
          Length = 378

 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 27/84 (32%), Positives = 44/84 (52%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQ 323
           ++ + V G+++L   D   P+NIG+    +M E+AE +    + E+ +      P+  R 
Sbjct: 248 FIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEIILSFEDRELPIHHIPG-PEGVRG 306

Query: 322 RKPDITKAKEVLDWEPKVVLRDGL 251
           R  D T  KE L W P + L+DGL
Sbjct: 307 RNSDNTLIKEKLGWAPTMKLKDGL 330
to top
>FCL2_ORYSA (Q67WR5) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2)
          Length = 347

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/83 (33%), Positives = 47/83 (56%)
 Frame = -2

Query: 499 VADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQR 320
           +A+ V  LM+  +G+    +N+G+  E T+ ELAE V+ ++  E  V      P+   +R
Sbjct: 249 LAEAVVVLMERYSGEEH--VNVGSGEEVTVRELAEAVRGVVGYEGVVAWDAARPEGVARR 306

Query: 319 KPDITKAKEVLDWEPKVVLRDGL 251
             D  + ++ L WEP+V LRDG+
Sbjct: 307 VVDSGRMRK-LGWEPRVALRDGI 328
to top
>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man|
           3,5-epimerase)
          Length = 377

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 30/105 (28%), Positives = 52/105 (49%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQ 323
           ++ + V G+++L   D   P+NIG+    +M E+AE V      ++ +      P+  R 
Sbjct: 247 FIDECVEGVLRLTKSDFREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-PEGVRG 305

Query: 322 RKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA*G 188
           R  D    KE L W P + L++GL +     +E++   +K KA G
Sbjct: 306 RNSDNNLIKEKLGWAPNMRLKEGLRITYFWIKEQI---EKEKAKG 347
to top
>FCL1_ARATH (O49213) GDP-L-fucose synthase 1 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           1) (AtGER1) (AtFX)
          Length = 312

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 27/64 (42%), Positives = 36/64 (56%)
 Frame = -2

Query: 442 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQRKPDITKAKEVLDWEPKVVL 263
           +NIG+  E T+ ELAE VKE++  E  +      PD   ++  D +K    L W PKV L
Sbjct: 236 VNIGSGQEVTIRELAELVKEVVGFEGKLGWDCTKPDGTPRKLMDSSKLAS-LGWTPKVSL 294

Query: 262 RDGL 251
           RDGL
Sbjct: 295 RDGL 298
to top
>FCL2_ARATH (Q9LMU0) Putative GDP-L-fucose synthase 2 (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3, 5-epimerase-4-reductase
           2) (AtGER2)
          Length = 328

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 25/80 (31%), Positives = 42/80 (52%)
 Frame = -2

Query: 442 INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQRKPDITKAKEVLDWEPKVVL 263
           +N+G+  E T+ ELAE VKE++  +  +      PD   ++  D +K    L W PK+ L
Sbjct: 250 VNVGSGVEVTIKELAELVKEVVGFKGKLVWDTTKPDGTPRKLMDSSKLAS-LGWTPKISL 308

Query: 262 RDGLVLMEDDFRERLAVPKK 203
           +DGL    + + E +   K+
Sbjct: 309 KDGLSQTYEWYLENVVQKKQ 328
to top
>GALE_LACHE (Q7WTB1) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 330

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 20/69 (28%), Positives = 34/69 (49%)
 Frame = -2

Query: 478 LMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQRKPDITKA 299
           L  +M  + +   N+G    ++ LE+ E+ K++   ++  TM       P     D TKA
Sbjct: 237 LKHMMKTNKSDVFNLGTAHGYSNLEILESAKKVTGIDIPYTMGPRRGGDPDSLVADSTKA 296

Query: 298 KEVLDWEPK 272
           + VL W+PK
Sbjct: 297 RTVLGWKPK 305
to top
>TGDS_HUMAN (O95455) dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46)|
          Length = 350

 Score = 38.1 bits (87), Expect = 0.014
 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNGDNTGPI-NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPR 326
           Y  D+V   + ++     G I NIG   E ++++LA+ + +LI    + +  EN  DY  
Sbjct: 234 YATDVVEAFLTVLKKGKPGEIYNIGTNFEMSVVQLAKELIQLIKETNSESEMENWVDYVN 293

Query: 325 QRKPDIT----KAKEV--LDWEPKVVLRDGLVLMEDDFRE 224
            R  +      K++++  L W PKV  ++G+    + +RE
Sbjct: 294 DRPTNDMRYPMKSEKIHGLGWRPKVPWKEGIKKTIEWYRE 333
to top
>Y1055_METJA (Q58455) Hypothetical protein MJ1055|
          Length = 326

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 19/85 (22%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNGDNTGPI-NIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPR 326
           Y++D+V+G+++ +  D    I N+GN     ++   E +++ +N +              
Sbjct: 225 YISDVVDGILRAIKKDFDYEIFNLGNSKPVKLMYFIELIEKYLNKKAKKKFLPMQDGDVL 284

Query: 325 QRKPDITKAKEVLDWEPKVVLRDGL 251
           +   D++K++++L ++PKV + +GL
Sbjct: 285 RTYADLSKSEKLLGYKPKVTIEEGL 309
to top
>ARNA_SALTI (Q8Z540) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 36.6 bits (83), Expect = 0.039
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 16/97 (16%)
 Frame = -2

Query: 442 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTPDYPR------QRKPD 311
           INIGNP  E ++ ELA  + +  +         P     + E+   Y +       RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           I  A+  LDWEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659
to top
>ARNA_SALPA (Q5PNA6) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 36.6 bits (83), Expect = 0.039
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 16/97 (16%)
 Frame = -2

Query: 442 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTPDYPR------QRKPD 311
           INIGNP  E ++ ELA  + +  +         P     + E+   Y +       RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           I  A+  LDWEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLDWEPSIAMRDTVEETLDFFLRSVDIAERA 659
to top
>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 34.3 bits (77), Expect = 0.20
 Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
 Frame = -2

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTPDYPR------QRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++  Y +       RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHYFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A+  LDWEPK+ +++
Sbjct: 623 IRNARRCLDWEPKIDMQE 640
to top
>ARNA_WIGBR (Q8D341) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 654

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 16/84 (19%)
 Frame = -2

Query: 463 NGDNTGPINIGNP-GEFTMLELAENVKELIN--------PEVT-VTMTENTPDYPR---- 326
           N  N   INIGNP  E+T+++L + +  +I         P+ +   M   T  Y      
Sbjct: 555 NKCNKKIINIGNPHNEYTIMQLTKIIINIIYSNNRNYNFPKFSGFNMLSGTNYYGEGYQD 614

Query: 325 --QRKPDITKAKEVLDWEPKVVLR 260
             +RKP+I  AK++L+W PK  +R
Sbjct: 615 IDRRKPNIDIAKKLLNWTPKTKIR 638
to top
>Y4AF_RHISN (P55353) Hypothetical 34.7 kDa protein y4aF|
          Length = 314

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
 Frame = -2

Query: 502 YVADMVNGLMKLMNG-DNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPR 326
           Y  D  + L+ L+     T  INIG+ GE +++ELA  V  ++  +  +    + PD   
Sbjct: 217 YSEDCSDALVFLLKHYSETEHINIGSGGEISIIELAHIVCRVVGFKGDIVFDTSKPD-GT 275

Query: 325 QRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLA 215
            RK   ++    + W PK  L  GL    + F   +A
Sbjct: 276 PRKLLSSERLVSMGWRPKTSLELGLAKSYESFVSNVA 312
to top
>ARNA_SALTY (O52325) Bifunctional polymyxin resistance arnA protein (Polymyxin|
           resistance protein pmrI) [Includes: UDP-glucuronic acid
           decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
           (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
           formyltransferase (EC 2.1
          Length = 660

 Score = 33.9 bits (76), Expect = 0.26
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
 Frame = -2

Query: 442 INIGNP-GEFTMLELAENVKELIN---------PEVTVTMTENTPDYPR------QRKPD 311
           INIGNP  E ++ ELA  + +  +         P     + E+   Y +       RKP 
Sbjct: 563 INIGNPDNEASIQELATLLLDSFDKHPLRCHFPPFAGFQVVESRSYYGKGYQDVAHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           I  A+  L WEP + +RD +    D F   + + ++A
Sbjct: 623 IDNARRCLGWEPSIAMRDTVEETLDFFLRSVDIAERA 659
to top
>ARNA_PSEF5 (Q4KC82) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 668

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 23/104 (22%)
 Frame = -2

Query: 499 VADMVNGLMKLMNGDNT----GPINIGNP-GEFTMLELAENVKELINPEVTVTMTENTPD 335
           +AD +  L ++++ +N       INIGNP  E ++ +L E   EL+       +  N P 
Sbjct: 542 IADGIEALARIVDNENDCCNGQIINIGNPDNEASIRQLGE---ELLRQFEAHPLRGNFPP 598

Query: 334 YP------------------RQRKPDITKAKEVLDWEPKVVLRD 257
           +                     RKP I  AK +L+WEP V + +
Sbjct: 599 FAGFRDVESKAFYGAGYQDVEHRKPSIDNAKRLLNWEPTVEMSE 642
to top
>EXOB_AZOBR (Q59083) UDP-glucose 4-epimerase (EC 5.1.3.2) (UDP-galactose|
           4-epimerase) (Galactowaldenase)
          Length = 348

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 21/80 (26%), Positives = 35/80 (43%)
 Frame = -2

Query: 487 VNGLMKLMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQRKPDI 308
           V  L+ L  G  +  +N G     ++ E+   ++E+   +V  T  +  P  P Q     
Sbjct: 242 VLALLHLRRGGGSLLMNCGYGRGASVREVVRTLEEVSGEQVPATFADRRPGDPPQLVAGA 301

Query: 307 TKAKEVLDWEPKVVLRDGLV 248
            + +E L W PK    DG+V
Sbjct: 302 DRIREQLGWVPKHDRLDGIV 321
to top
>RFBE_SALTI (P14169) CDP-paratose 2-epimerase (EC 5.1.3.10) (CDP-tyvelose|
           2-epimerase)
          Length = 338

 Score = 32.7 bits (73), Expect = 0.57
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -2

Query: 439 NIGNP--GEFTMLELAENVKELINPEVTVTMTENTPDYPRQRKPDITKAKEVLDWEPKVV 266
           NIG       ++LEL + +++  N ++  T         R    DI K    +DW PKV 
Sbjct: 264 NIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPVRESDQRVFVADIKKITNAIDWSPKVS 323

Query: 265 LRDGLVLMED 236
            +DG+  M D
Sbjct: 324 AKDGVQKMYD 333
to top
>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)|
           (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase)
          Length = 321

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
 Frame = -2

Query: 457 DNTGP----INIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQRKPDITKAKEV 290
           +NT P    IN+G   + T+ ELA+ + +++  +  V    + PD   ++  D+T+  + 
Sbjct: 234 ENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASKPDGTPRKLLDVTRLHQ- 292

Query: 289 LDWEPKVVLRDGL 251
           L W  ++ L  GL
Sbjct: 293 LGWYHEISLEAGL 305
to top
>ARNA_SALCH (P0C0R6) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -2

Query: 322 RKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKA 200
           RKP I  A+  L WEP + +RD +    D F   + V ++A
Sbjct: 619 RKPSIDNARRCLGWEPSIAMRDTVEETLDFFLRSVDVAERA 659
to top
>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 662

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 322 RKPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA 194
           RKP I  A+ +LDW+P + LR+ +    D F       ++A+A
Sbjct: 620 RKPSIDNARRLLDWQPTIELRETIGKTLDFFLHEALREREAQA 662
to top
>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin|
           resistance protein pmrI) [Includes: UDP-glucuronic acid
           decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase)
           (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose
           formyltransferase (EC 2.1
          Length = 660

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
 Frame = -2

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTPDYPR------QRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++  Y +       RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHRCLDWEPKIDMQE 640
to top
>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 32.3 bits (72), Expect = 0.74
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
 Frame = -2

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTPDYPR------QRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++  Y +       RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHHCLDWEPKIDMQE 640
to top
>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 16/78 (20%)
 Frame = -2

Query: 442 INIGNP-GEFTMLELAENV---------KELINPEVTVTMTENTPDYPR------QRKPD 311
           INIGNP  E ++ EL E +         +    P     + E++  Y +       RKP 
Sbjct: 563 INIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSCYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLRD 257
           I  A   LDWEPK+ +++
Sbjct: 623 IRNAHRCLDWEPKIDMQE 640
to top
>Y4NL_RHISN (P55584) Hypothetical 38.7 kDa protein y4nL|
          Length = 356

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = -2

Query: 313 DITKAKEVLDWEPKVVLRDGL 251
           DITKA++VL + PK+ LR+G+
Sbjct: 322 DITKARKVLGYAPKIALREGM 342
to top
>GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 334

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 16/66 (24%), Positives = 28/66 (42%)
 Frame = -2

Query: 469 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQRKPDITKAKEV 290
           L     +G  N+GN   F++ E+ E  +++    +   +       P        KA+ +
Sbjct: 239 LRKDGQSGSFNLGNGKGFSVKEVIEVCRQVTGHPIPAEIAPRRSGDPASLIASSEKAQTI 298

Query: 289 LDWEPK 272
           L WEPK
Sbjct: 299 LGWEPK 304
to top
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
           (High molecular weight salivary mucin MG1) (Sublingual
           gland mucin)
          Length = 5703

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -3

Query: 285 TGSPRSSYVTAWCSWRTTSGSVWQCPRRPRPKATSLR-LAYITNLPEHTHSWVGSSIFV 112
           T SP +S+ T  CS  T SG +WQC   P P   S++  A+I+   E  +   G   +V
Sbjct: 394 TYSPGTSFNTT-CSSCTCSGGLWQCQDLPCPGTCSVQGGAHISTYDEKLYDLHGDCSYV 451
to top
>CINA_BACHK (Q6HF34) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -2

Query: 403 LAENVKELINPEVTVTMTENT-PDYPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398
to top
>CINA_BACCZ (Q636P5) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -2

Query: 403 LAENVKELINPEVTVTMTENT-PDYPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398
to top
>CINA_BACC1 (Q732U5) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -2

Query: 403 LAENVKELINPEVTVTMTENT-PDYPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLKADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398
to top
>CINA_BACAN (Q81WQ3) CinA-like protein|
          Length = 412

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -2

Query: 403 LAENVKELINPEVTVTMTENT-PDYPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVKEL+  ++ ++ T    PD    ++P        +  EP VV    L       R
Sbjct: 335 LAENVKELLEADIGISFTGVAGPDASEHKEPGTVFVGLAIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERSA 398
to top
>RECO_CHLMU (Q9PJS3) DNA repair protein recO (Recombination protein O)|
          Length = 234

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 10/77 (12%)
 Frame = -3

Query: 312 TSQRQRRFLTGSPRSSYVTAWCSWRTTSGS----------VWQCPRRPRPKATSLRLAYI 163
           T  + R+ L G  ++ + T   S+R    +           WQ   +P P+  SL L ++
Sbjct: 62  TPPKMRKVLQGELKNPFTTIKNSYRLLQSTGKMIQAILKTQWQ--EKPSPQLFSLFLNFL 119

Query: 162 TNLPEHTHSWVGSSIFV 112
             +PE  H +  SS+F+
Sbjct: 120 QRIPETPHPYFFSSMFL 136
to top
>FALZ_HUMAN (Q12830) Fetal Alzheimer antigen (Fetal Alz-50-reactive clone 1)|
          Length = 810

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
 Frame = +2

Query: 353 HRHCHLWVDQLLHVLSKF---QHGEFTWVPNVNGSSVVSIHQLHKTIDHI 493
           HR  H   D+  H+  KF     GEF W  +V+GS V++I  L  TI  +
Sbjct: 728 HREDH---DKRRHLAHKFCLTPAGEFKWNGSVHGSKVLTISTLRLTITQL 774
to top
>ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA protein [Includes:|
           UDP-glucuronic acid decarboxylase (EC 4.1.1.-)
           (UDP-GlcUA decarboxylase) (ArnAFT);
           UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC
           2.1.2.-) (UDP-L-Ara4N formyltransferase
          Length = 660

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 16/77 (20%)
 Frame = -2

Query: 442 INIGNP-GEFTMLELAE---------NVKELINPEVTVTMTENTPDYPR------QRKPD 311
           INIGNP  E ++ +LAE          +++   P       E+   Y +       RKP 
Sbjct: 563 INIGNPTNEASIRQLAEILLDSFEDHELRDHFPPFAGFKKVESGSYYGKGYQDVEHRKPS 622

Query: 310 ITKAKEVLDWEPKVVLR 260
           I  A+ +LDW+P + ++
Sbjct: 623 IKNAERLLDWKPTIDMK 639
to top
>TR2M_AGRTU (P0A3V3) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 755

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -2

Query: 310 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 167
           I KA   LD+EP+     GLVL+    EDD  + LAVP K +            FPAF  
Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645

Query: 166 H 164
           H
Sbjct: 646 H 646
to top
>TR2M_AGRT4 (P0A3V2) Tryptophan 2-monooxygenase (EC 1.13.12.3)|
          Length = 755

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 24/61 (39%), Positives = 29/61 (47%), Gaps = 12/61 (19%)
 Frame = -2

Query: 310 ITKAKEVLDWEPKVVLRDGLVLM----EDDFRERLAVPKKAK--------A*GHFPAFGV 167
           I KA   LD+EP+     GLVL+    EDD  + LAVP K +            FPAF  
Sbjct: 586 IAKAVYCLDYEPQDPNGKGLVLISYTWEDDSHKLLAVPDKKERLCLLRDAISRSFPAFAQ 645

Query: 166 H 164
           H
Sbjct: 646 H 646
to top
>CINA_BACCR (Q81A15) CinA-like protein|
          Length = 412

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -2

Query: 403 LAENVKELINPEVTVTMTENT-PDYPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           LAENVK+++  ++ ++ T    PD   Q++P        +  EP VV    L       R
Sbjct: 335 LAENVKDVLKADIGISFTGVAGPDASEQKEPGTVFVGLSIKDEPTVVFPLNLSGSRQQIR 394

Query: 226 ERLA 215
           ER A
Sbjct: 395 ERTA 398
to top
>SPSJ_BACSU (P39630) Spore coat polysaccharide biosynthesis protein spsJ|
          Length = 315

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 19/73 (26%), Positives = 31/73 (42%)
 Frame = -2

Query: 469 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQRKPDITKAKEV 290
           L  G +    NIG   E T  ELA  + + +  E      E+   + R+   + +K K  
Sbjct: 231 LEKGTDGEVYNIGGGNERTNKELASVILKHLGCEELFAHVEDRKGHDRRYAINASKLKNE 290

Query: 289 LDWEPKVVLRDGL 251
           L W  +V   +G+
Sbjct: 291 LGWRQEVTFEEGI 303
to top
>GMD1_ARATH (Q9SNY3) GDP-mannose 4,6 dehydratase 1 (EC 4.2.1.47) (GDP-D-mannose|
           dehydratase 1) (GMD 1)
          Length = 361

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = -2

Query: 319 KPDITKAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKKAK 197
           K D +KAKE+L W+PKV     + +M D   E L + K+ K
Sbjct: 310 KGDASKAKEMLGWKPKVGFEKLVKMMVD---EDLELAKREK 347
to top
>GALE_STRMU (P96995) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)|
           (UDP-galactose 4-epimerase)
          Length = 333

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 15/66 (22%), Positives = 30/66 (45%)
 Frame = -2

Query: 469 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQRKPDITKAKEV 290
           L  G+ +   N+G+   F+ L++ E  +++   ++           P        KA+EV
Sbjct: 242 LRQGNPSTAFNLGSSTGFSNLQILEAARKVTGQKIPAEKAARRSGDPDTLIASSEKAREV 301

Query: 289 LDWEPK 272
           L W+P+
Sbjct: 302 LGWKPQ 307
to top
>MUTL_VIBCH (Q9KV13) DNA mismatch repair protein mutL|
          Length = 653

 Score = 29.6 bits (65), Expect = 4.8
 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
 Frame = -2

Query: 430 NPGEFTMLELAENVKELINPEVTVTMTE-------NTPDYPRQRKPD 311
           N G F +   AE V   + P +  T  E       NTPDYPR+   D
Sbjct: 341 NEGAFHLPHCAEEVNPPVVPMIDTTQQERVWQAVQNTPDYPRKAPRD 387
to top
>UVRC_BACSK (Q5WEK8) UvrABC system protein C (Protein uvrC) (Excinuclease ABC|
           subunit C)
          Length = 594

 Score = 29.3 bits (64), Expect = 6.3
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = -2

Query: 406 ELAENVKELINPEVTVTMTENTPDYPRQRKPDITKAKEVLDWEPKVVLRDGLVLME 239
           E++E   + +  E+T  +     D   Q +  + KA E LD+E    LRD +  ME
Sbjct: 174 EVSEETNQTMVNEITKFLKNGHSDIKEQLRERMEKAAEDLDFERAKELRDTIAQME 229
to top
>KSGA_STRT2 (Q5M2L6) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 290

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 24/94 (25%), Positives = 41/94 (43%)
 Frame = -2

Query: 469 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQRKPDITKAKEV 290
           L + DN   IN     +    +L   VKE  NP++ + +  N P Y       IT    +
Sbjct: 88  LRDHDNVKVIN----EDVLKADLQTRVKEFENPDLPIKVVANLPYY-------ITTPILM 136

Query: 289 LDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA*G 188
              E K+   + +V+M+ +  +R++     KA G
Sbjct: 137 HLIESKIPFSEFVVMMQKEVADRISAEPNTKAYG 170
to top
>KSGA_STRT1 (Q5LY12) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 290

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 24/94 (25%), Positives = 41/94 (43%)
 Frame = -2

Query: 469 LMNGDNTGPINIGNPGEFTMLELAENVKELINPEVTVTMTENTPDYPRQRKPDITKAKEV 290
           L + DN   IN     +    +L   VKE  NP++ + +  N P Y       IT    +
Sbjct: 88  LRDHDNVKVIN----EDVLKADLQTRVKEFENPDLPIKVVANLPYY-------ITTPILM 136

Query: 289 LDWEPKVVLRDGLVLMEDDFRERLAVPKKAKA*G 188
              E K+   + +V+M+ +  +R++     KA G
Sbjct: 137 HLIESKIPFSEFVVMMQKEVADRISAEPNTKAYG 170
to top
>KSGA_STRMU (P59156) Dimethyladenosine transferase (EC 2.1.1.-)|
           (S-adenosylmethionine-6-N', N'-adenosyl(rRNA)
           dimethyltransferase) (16S rRNA dimethylase) (High level
           kasugamycin resistance protein ksgA) (Kasugamycin
           dimethyltransferase)
          Length = 291

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 18/73 (24%), Positives = 34/73 (46%)
 Frame = -2

Query: 406 ELAENVKELINPEVTVTMTENTPDYPRQRKPDITKAKEVLDWEPKVVLRDGLVLMEDDFR 227
           +L   +KE  NP++ + +  N P Y       IT    +   E K+   + +V+M+ +  
Sbjct: 105 DLQTRIKEFANPDLPIKVVANLPYY-------ITTPILMHLIESKIPFAEFVVMMQKEVA 157

Query: 226 ERLAVPKKAKA*G 188
           +R++     KA G
Sbjct: 158 DRISAQPSTKAYG 170
to top
>SECA1_MYCLE (P57996) Preprotein translocase secA 1 subunit|
          Length = 940

 Score = 28.9 bits (63), Expect = 8.2
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -2

Query: 304 KAKEVLDWEPKVVLRDGLVLMEDDFRERLAVPKK 203
           KAKE+ + +   ++RDG VL+ D+F  R+ + ++
Sbjct: 296 KAKELFNRDKDYIVRDGEVLIVDEFTGRVLIGRR 329


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,243,713
Number of Sequences: 219361
Number of extensions: 1594281
Number of successful extensions: 4577
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 4457
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4571
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3638905326
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top