ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32g01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inh... 722 0.0
2dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhi... 478 e-132
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
4dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic D... 115 1e-22
5gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
7dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
8dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
10dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for ch... 56 1e-04
11dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
12dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
13dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
14dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
15dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homolo... 56 1e-04
16dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for ... 56 1e-04
17dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
18dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
19dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
20ref|NM_193094.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.029
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.029
22dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.029
23dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.029
24ref|XM_792322.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.45
25gb|S82314.1| PRm 3=chitinase {clone CHEM 5} [Zea mays=maize, cv.... 44 0.45
26dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 44 0.45
27gb|AY107125.1| Zea mays PCO125117 mRNA sequence 44 0.45
28ref|XM_754996.1| Ustilago maydis 521 hypothetical protein (UM039... 42 1.8
29emb|AJ297529.2|PST297529 Pseudomonas stutzeri nif operon and fla... 42 1.8
30dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
31dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
32dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for ch... 42 1.8
33ref|XM_323898.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.0
34ref|XM_950893.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.0
35gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 40 7.0
36gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 7.0
37emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete ... 40 7.0
38emb|BX640424.1| Bordetella parapertussis strain 12822, complete ... 40 7.0
39emb|AL845544.11| Zebrafish DNA sequence from clone BUSM1-133F4 i... 40 7.0
40dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
41dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DN... 40 7.0
42dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 7.0
43dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
44dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
45gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 7.0
46gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence,... 40 7.0 
>emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inhibitor protein I (xipI gene)
          Length = 915

 Score =  722 bits (364), Expect = 0.0
 Identities = 406/420 (96%)
 Strand = Plus / Minus

                                                                       
Query: 96  tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 915 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtatcggtccca 856

                                                                       
Query: 156 gagcatgatgccgccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagac 215
           ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 855 gagcatgatgccgccgtagttgtccttcttctgcgccaccggcgcgacgccgtagtagac 796

                                                                       
Query: 216 gttcttggggtgtacccactggtaggacttgtcgtccgccgtgagcccgacgtagaaccg 275
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 795 gttcttggggtgtacccactggtgggacttgtcgtccgccgtgagcccgacgtagaaccg 736

                                                                       
Query: 276 ggtggcagggtacgccgccgtccactcgttccacgagccctcccacccaaagttctggtt 335
           |||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 735 ggtggccgggtacgccgccgtccacttgtcccacgagccctcccacccaaggttctggtt 676

                                                                       
Query: 336 gcacccattgtcgctctcgtatgtcctcacgtggacgcgctcgacgatccccgtcgccag 395
           |||||  |||||||||||||| |||||||||||| ||||||||| |||||||||||||||
Sbjct: 675 gcaccacttgtcgctctcgtaggtcctcacgtgggcgcgctcgaagatccccgtcgccag 616

                                                                       
Query: 396 cgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtgcag 455
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtgcag 556

                                                                       
Query: 456 cggcttccccggccccccgcggatgttgtgcttggccagctccagcgccagcacgtcgta 515
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cggcttccccgggcccccgcggatgttgtgcttggccagctccagcgccagcacgtcgta 496
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>dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhibitor XIP-III,
           complete cds
          Length = 934

 Score =  478 bits (241), Expect = e-132
 Identities = 378/423 (89%), Gaps = 3/423 (0%)
 Strand = Plus / Minus

                                                                       
Query: 96  tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 155
           ||||||||||||||||||  |||| ||||||| | |||||||||||||||| ||||||||
Sbjct: 932 tcaggcgtagtacttgatgtagctactgtagtcgctctgcttgtcgaagtatcggtccca 873

                                                                       
Query: 156 gagcatgatgccgccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagac 215
           ||||||||  ||||||||||||||||||||||||  |||||||| || || |||||||||
Sbjct: 872 gagcatgaccccgccgtagttgtccttcttctgcaccaccggcgtgatgccgtagtagac 813

                                                                       
Query: 216 gttcttggggtgtacccactggtaggacttgtcgtccgccgtgagcccgacgtagaaccg 275
           |||||||||||||| ||||||||| ||||| ||||| || |||||||||| | |||||||
Sbjct: 812 gttcttggggtgtatccactggtacgacttctcgtcggcggtgagcccgatgaagaaccg 753

                                                                       
Query: 276 ggtggcagggtacgccgccgtccactcgttccacgagccctcccacccaaagttctggtt 335
           |||||| ||||||||||||||||||  || |||||   |||||||| |   || ||||||
Sbjct: 752 ggtggccgggtacgccgccgtccacctgtcccacgcctcctcccacgccccgtactggtt 693

                                                                       
Query: 336 gcacccattgtcgctctc---gtatgtcctcacgtggacgcgctcgacgatccccgtcgc 392
           |||| | |||||||||||   |||  |||||||||| |||||||| | ||||||||||||
Sbjct: 692 gcacgccttgtcgctctcctcgtagatcctcacgtgcacgcgctccaagatccccgtcgc 633

                                                                       
Query: 393 cagcgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtg 452
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cagcgcccgccccacgtgcgccgccggcgggtacccgcaccggaccgtcgccgtcaggtg 573

                                                                       
Query: 453 cagcggcttccccggccccccgcggatgttgtgcttggccagctccagcgccagcacgtc 512
           ||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 572 cagcggcttccccgggccgccgcggatgttgtgcttcgccagctccagcgccagcacgtc 513

              
Query: 513 gta 515
           |||
Sbjct: 512 gta 510
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  115 bits (58), Expect = 1e-22
 Identities = 73/78 (93%)
 Strand = Plus / Plus

                                                                            
Query: 438      cgtcgccgtcaggtgcagcggcttccccggccccccgcggatgttgtgcttggccagctc 497
                |||||| |||||||||||||||||||| ||| | |||||||||||||||||||| |||||
Sbjct: 14490283 cgtcgctgtcaggtgcagcggcttcccgggcgcgccgcggatgttgtgcttggcgagctc 14490342

                                  
Query: 498      cagcgccagcacgtcgta 515
                ||||||||||||||||||
Sbjct: 14490343 cagcgccagcacgtcgta 14490360



 Score =  101 bits (51), Expect = 2e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                            
Query: 108      cttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtcccagagcatgatgcc 167
                ||||| || |||| |||||||| || |||||||| |||| |||||||||| ||||| |||
Sbjct: 14484656 cttgaccatgctggtgtagttgctcagcttgtcgtagtatcggtcccagatcatgaagcc 14484715

                                                                            
Query: 168      gccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagacgttcttggggtg 227
                |||||||||||||  ||||||||    ||| ||||||  |||||||||||||||||||||
Sbjct: 14484716 gccgtagttgtccgccttctgcgtggacggggcgacgtcgtagtagacgttcttggggtg 14484775

                       
Query: 228      tacccac 234
                 ||||||
Sbjct: 14484776 cacccac 14484782



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 366      gtggacgcgctcgacgatccccgtcgcca 394
                ||||| |||||||| ||||||||||||||
Sbjct: 14490211 gtggatgcgctcgaagatccccgtcgcca 14490239



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 265      acgtagaaccgggtggcagggtacgccgccgtc 297
                ||||||||||| || || |||||||||||||||
Sbjct: 14484813 acgtagaaccgtgtcgccgggtacgccgccgtc 14484845
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>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021M10
          Length = 163416

 Score =  115 bits (58), Expect = 1e-22
 Identities = 73/78 (93%)
 Strand = Plus / Plus

                                                                         
Query: 438   cgtcgccgtcaggtgcagcggcttccccggccccccgcggatgttgtgcttggccagctc 497
             |||||| |||||||||||||||||||| ||| | |||||||||||||||||||| |||||
Sbjct: 83457 cgtcgctgtcaggtgcagcggcttcccgggcgcgccgcggatgttgtgcttggcgagctc 83516

                               
Query: 498   cagcgccagcacgtcgta 515
             ||||||||||||||||||
Sbjct: 83517 cagcgccagcacgtcgta 83534



 Score =  101 bits (51), Expect = 2e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                         
Query: 108   cttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtcccagagcatgatgcc 167
             ||||| || |||| |||||||| || |||||||| |||| |||||||||| ||||| |||
Sbjct: 77830 cttgaccatgctggtgtagttgctcagcttgtcgtagtatcggtcccagatcatgaagcc 77889

                                                                         
Query: 168   gccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagacgttcttggggtg 227
             |||||||||||||  ||||||||    ||| ||||||  |||||||||||||||||||||
Sbjct: 77890 gccgtagttgtccgccttctgcgtggacggggcgacgtcgtagtagacgttcttggggtg 77949

                    
Query: 228   tacccac 234
              ||||||
Sbjct: 77950 cacccac 77956



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 366   gtggacgcgctcgacgatccccgtcgcca 394
             ||||| |||||||| ||||||||||||||
Sbjct: 83385 gtggatgcgctcgaagatccccgtcgcca 83413



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 265   acgtagaaccgggtggcagggtacgccgccgtc 297
             ||||||||||| || || |||||||||||||||
Sbjct: 77987 acgtagaaccgtgtcgccgggtacgccgccgtc 78019
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>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0022E16 map C481S, complete sequence
          Length = 179668

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 129   ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
             ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 82293 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 82246



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 135   cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 177
             ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 88121 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 88163



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 137   tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 177
             |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 83663 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 83703



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                      
Query: 359   tcctcacgtggacgcgctcgacgatccccgtcgccagcgcc 399
             |||||||||||| |||| |||  | ||||||||||||||||
Sbjct: 64128 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 64088
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 129      ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
                ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 28123738 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 28123691



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 135      cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 177
                ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 28129566 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 28129608



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 137      tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 177
                |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 28125108 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 28125148



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 359      tcctcacgtggacgcgctcgacgatccccgtcgccagcgcc 399
                |||||||||||| |||| |||  | ||||||||||||||||
Sbjct: 28105573 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 28105533
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>dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111J19, full
           insert sequence
          Length = 1176

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 129 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 988 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 941
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>dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E01, full
           insert sequence
          Length = 1234

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 129 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 989 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 942
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 129      ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
                ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 28108616 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 28108569



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 135      cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 177
                ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 28114444 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 28114486



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 137      tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 177
                |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 28109986 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 28110026



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                         
Query: 359      tcctcacgtggacgcgctcgacgatccccgtcgccagcgcc 399
                |||||||||||| |||| |||  | ||||||||||||||||
Sbjct: 28090451 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 28090411
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>dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete
           cds
          Length = 1220

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 129 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 963 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 916
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>dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C60571
          Length = 1220

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 129 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 975 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 928
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>dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C11701
          Length = 1171

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 129 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 933 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 886
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>dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C12269
          Length = 1214

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 129 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 973 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 926
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>dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C3540
          Length = 1229

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 129 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 972 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 925
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>dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds,clone:C10295
          Length = 1199

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 129 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 954 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 907
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>dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for class III chitinase
           homologue (OsChib3H-a)H-, complete cds, clone:C60129
          Length = 1187

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 129 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 176
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 957 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 910
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>dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101A20, full
           insert sequence
          Length = 1162

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 135 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 177
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 927 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 885
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>dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E14, full
           insert sequence
          Length = 1193

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 135 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 177
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 931 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 889
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>dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M21, full
           insert sequence
          Length = 1153

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 135 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 177
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 918 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 876
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>ref|NM_193094.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 951

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 131 tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 190
           |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 916 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 857

                   
Query: 191 acaccggc 198
           || |||||
Sbjct: 856 actccggc 849
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                            
Query: 131      tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 190
                |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 26162477 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 26162418

                        
Query: 191      acaccggc 198
                || |||||
Sbjct: 26162417 actccggc 26162410
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>dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A01, full
           insert sequence
          Length = 1165

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 131 tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 190
           |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 964 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 905

                   
Query: 191 acaccggc 198
           || |||||
Sbjct: 904 actccggc 897
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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E12
          Length = 152448

 Score = 48.1 bits (24), Expect = 0.029
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 131   tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 190
             |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 54335 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 54276

                     
Query: 191   acaccggc 198
             || |||||
Sbjct: 54275 actccggc 54268
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>ref|XM_792322.1| PREDICTED: Strongylocentrotus purpuratus similar to putative
           endoplasmic reticulum protein, with at least 5
           transmembrane domains, of eukaryotic origin (56.3 kD)
           (4P439) (LOC592817), mRNA
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 118 ctgctgtagttggtctgcttgt 139
           ||||||||||||||||||||||
Sbjct: 86  ctgctgtagttggtctgcttgt 107
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>gb|S82314.1| PRm 3=chitinase {clone CHEM 5} [Zea mays=maize, cv. INRA 258,
           mercuric chloride-treated, leaves, mRNA Partial, 945 nt]
          Length = 945

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 148 cggtcccagagcatgatgccgccgtagttg 177
           |||||||| | |||||||||||||||||||
Sbjct: 870 cggtcccacaccatgatgccgccgtagttg 841
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 474     gcggatgttgtgcttggccagc 495
               ||||||||||||||||||||||
Sbjct: 1738045 gcggatgttgtgcttggccagc 1738066
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>gb|AY107125.1| Zea mays PCO125117 mRNA sequence
          Length = 1252

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 148 cggtcccagagcatgatgccgccgtagttg 177
           |||||||| | |||||||||||||||||||
Sbjct: 928 cggtcccacaccatgatgccgccgtagttg 899
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>ref|XM_754996.1| Ustilago maydis 521 hypothetical protein (UM03942.1) partial mRNA
          Length = 4143

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 481  ttgtgcttggccagctccagcgcca 505
            ||||||||||||||||| |||||||
Sbjct: 3083 ttgtgcttggccagctcgagcgcca 3059
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>emb|AJ297529.2|PST297529 Pseudomonas stutzeri nif operon and flanking genes, strain A15101
          Length = 24798

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 477  gatgttgtgcttggccagctc 497
            |||||||||||||||||||||
Sbjct: 5350 gatgttgtgcttggccagctc 5370
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>dbj|AK106319.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E05, full
           insert sequence
          Length = 1076

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 359 tcctcacgtggacgcgctcgacgatccccgtcgccagcgcc 399
           |||||||||||| |||| |||  | ||||||||||||||||
Sbjct: 695 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 655
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>dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G04, full
           insert sequence
          Length = 1161

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 137 tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 177
           |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 940 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 900
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>dbj|D55710.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete
           cds
          Length = 1145

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 359 tcctcacgtggacgcgctcgacgatccccgtcgccagcgcc 399
           |||||||||||| |||| |||  | ||||||||||||||||
Sbjct: 673 tcctcacgtggatgcgcgcgaacacccccgtcgccagcgcc 633
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>ref|XM_323898.1| Neurospora crassa OR74A hypothetical protein (NCU04546.1) partial
            mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  ccgtcgccagcgcccgcccc 405
            ||||||||||||||||||||
Sbjct: 1232 ccgtcgccagcgcccgcccc 1251
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>ref|XM_950893.1| Neurospora crassa OR74A hypothetical protein (NCU04546.1) partial
            mRNA
          Length = 1638

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 386  ccgtcgccagcgcccgcccc 405
            ||||||||||||||||||||
Sbjct: 1232 ccgtcgccagcgcccgcccc 1251
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>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 488     tggccagctccagcgccagc 507
               ||||||||||||||||||||
Sbjct: 1671199 tggccagctccagcgccagc 1671218
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 496     tccagcgccagcacgtcgta 515
               ||||||||||||||||||||
Sbjct: 2513089 tccagcgccagcacgtcgta 2513070
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>emb|BX640438.1| Bordetella bronchiseptica strain RB50, complete genome; segment 2/16
          Length = 347786

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    gccagctccagcgccagcac 509
              ||||||||||||||||||||
Sbjct: 336027 gccagctccagcgccagcac 336008
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>emb|BX640424.1| Bordetella parapertussis strain 12822, complete genome; segment 2/14
          Length = 349146

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 490    gccagctccagcgccagcac 509
              ||||||||||||||||||||
Sbjct: 334112 gccagctccagcgccagcac 334093
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>emb|AL845544.11| Zebrafish DNA sequence from clone BUSM1-133F4 in linkage group 7
             Contains three CpG islands, complete sequence
          Length = 110786

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    caatacatcagaatcaaatc 60
             ||||||||||||||||||||
Sbjct: 43424 caatacatcagaatcaaatc 43405
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 386      ccgtcgccagcgcccgcccc 405
                ||||||||||||||||||||
Sbjct: 20419457 ccgtcgccagcgcccgcccc 20419438
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>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence
          Length = 94287

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 156   gagcatgatgccgccgtagttgtccttc 183
             ||||||||||| |||| |||||||||||
Sbjct: 66383 gagcatgatgcggccggagttgtccttc 66356
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 184     ttctgcgacaccggcgcgac 203
               ||||||||||||||||||||
Sbjct: 5735197 ttctgcgacaccggcgcgac 5735178
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>dbj|AP005682.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1531_B07
          Length = 115245

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 386   ccgtcgccagcgcccgcccc 405
             ||||||||||||||||||||
Sbjct: 47596 ccgtcgccagcgcccgcccc 47577
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>dbj|AK070219.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043K12, full
           insert sequence
          Length = 2098

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 386 ccgtcgccagcgcccgcccc 405
           ||||||||||||||||||||
Sbjct: 233 ccgtcgccagcgcccgcccc 252
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 381     gatccccgtcgccagcgccc 400
               ||||||||||||||||||||
Sbjct: 1274939 gatccccgtcgccagcgccc 1274920
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>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C)
          Length = 158230

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 496    tccagcgccagcacgtcgta 515
              ||||||||||||||||||||
Sbjct: 127784 tccagcgccagcacgtcgta 127803


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,903,775
Number of Sequences: 3902068
Number of extensions: 2903775
Number of successful extensions: 58811
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58294
Number of HSP's gapped (non-prelim): 513
length of query: 515
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 492
effective length of database: 17,143,297,704
effective search space: 8434502470368
effective search space used: 8434502470368
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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