Clone Name | rbart32f12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (E... | 57 | 4e-08 | 2 | GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC ... | 41 | 0.002 | 3 | OL287_RAT (P23267) Olfactory receptor 287 (Olfactory receptor-li... | 31 | 1.8 | 4 | CRF1_YARLI (P45815) Copper resistance protein CRF1 | 31 | 2.4 | 5 | Y066_NPVOP (Q83949) Hypothetical 98.6 kDa protein (ORF71) | 29 | 9.0 |
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>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28| kDa cold-induced protein) Length = 236 Score = 56.6 bits (135), Expect = 4e-08 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 1/74 (1%) Frame = -3 Query: 522 CSKGEGYFGGETXXXXXXXXXXXXXXLNATEVMSGTKIFDPVKTPLLAAWMDRFSELDAA 343 CSKG+ +FGG+ A + + G ++ DP +TP LAAW +RF DAA Sbjct: 150 CSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAA 209 Query: 342 KAALP-EVDRVVEF 304 K +P + D+++EF Sbjct: 210 KGVVPDDADKLLEF 223
>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)| (Protein bronze-2) Length = 236 Score = 41.2 bits (95), Expect = 0.002 Identities = 19/45 (42%), Positives = 26/45 (57%) Frame = -3 Query: 438 ATEVMSGTKIFDPVKTPLLAAWMDRFSELDAAKAALPEVDRVVEF 304 A E + G + D TPLL W RF+ AAK LP+ ++VV+F Sbjct: 177 ACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQF 221
>OL287_RAT (P23267) Olfactory receptor 287 (Olfactory receptor-like protein| F6) Length = 311 Score = 31.2 bits (69), Expect = 1.8 Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 11/122 (9%) Frame = +1 Query: 115 VQFYTRTSTKSKQIFWDRGNIIN*SLFERNMHFSYSMGLTFL*YLLVVRSNNSGSSLCLP 294 + F T K+ F RG +I+ + M+F +S+G T +LL V + + ++CLP Sbjct: 74 IWFTTACVPKTLATFAPRGGVISLAGCATQMYFVFSLGCTEY-FLLAVMAYDRYLAICLP 132 Query: 295 L-HGKFDHP-------INLWQRRLRSIELAKAIHPCRQERSLNRIKDLGSR---HHFCSV 441 L +G P + W +I + + + R+ GSR H FC + Sbjct: 133 LRYGGIMTPGLAMRLALGSWLCGFSAITVPATL--------IARLSFCGSRVINHFFCDI 184 Query: 442 QP 447 P Sbjct: 185 SP 186
>CRF1_YARLI (P45815) Copper resistance protein CRF1| Length = 411 Score = 30.8 bits (68), Expect = 2.4 Identities = 16/43 (37%), Positives = 23/43 (53%) Frame = +3 Query: 267 QQRQQLVPASSWQIRPPYQPLATPPSQHRAR*SDPSMPPRAES 395 QQ Q P + + P P+ATP HRA + PS+ P+ +S Sbjct: 146 QQPQMPTPVHTTNVTTP--PVATPTHSHRALSTTPSLSPQPQS 186
>Y066_NPVOP (Q83949) Hypothetical 98.6 kDa protein (ORF71)| Length = 875 Score = 28.9 bits (63), Expect = 9.0 Identities = 15/40 (37%), Positives = 17/40 (42%) Frame = +3 Query: 267 QQRQQLVPASSWQIRPPYQPLATPPSQHRAR*SDPSMPPR 386 QQ Q P Q +PP QP PP Q P PP+ Sbjct: 101 QQPPQPPPDQPQQPQPPQQPPQQPPQQQPQPPQPPQQPPQ 140 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 69,406,643 Number of Sequences: 219361 Number of extensions: 1247626 Number of successful extensions: 3008 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2909 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3003 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)