ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ617794.1| Secale cereale mRNA for ocs-element binding fact... 505 e-140
2gb|AF479057.1| Triticum aestivum ocs-element binding factor 1 mR... 450 e-123
3dbj|AB185280.1| Oryza sativa (japonica cultivar-group) OsOBF1 mR... 266 6e-68
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 266 6e-68
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 266 6e-68
6emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa... 266 6e-68
7emb|X62745.1|ZMOCSBFA Z.mays OBF1 mRNA for ocs-element binding f... 218 1e-53
8gb|AY103652.1| Zea mays PCO086174 mRNA sequence 210 3e-51
9gb|BT018824.1| Zea mays clone EL01N0532F03.d mRNA sequence 184 2e-43
10gb|AY108024.1| Zea mays PCO086173 mRNA sequence 184 2e-43
11emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa... 98 3e-17
12gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 46 0.11
13emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 46 0.11
14gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 46 0.11
15dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 46 0.11
16gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, comp... 44 0.42
17ref|XM_655381.1| Aspergillus nidulans FGSC A4 hypothetical prote... 44 0.42
18ref|XM_545387.2| PREDICTED: Canis familiaris similar to germinal... 44 0.42
19gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.42
20gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosom... 44 0.42
21ref|XM_478229.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.6
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
23emb|AL353693.19| Human DNA sequence from clone RP11-470P21 on ch... 42 1.6
24emb|CR555306.1| Azoarcus sp. EbN1 complete genome 42 1.6
25gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.6
26gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 42 1.6
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
28dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
29dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
30dbj|AK108797.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
31tpe|BN000631.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 42 1.6
32gb|AC171178.2| Gallus gallus BAC clone CH261-77I20 from chromoso... 42 1.6
33gb|AC153508.2| Mus musculus 10 BAC RP23-233B6 (Roswell Park Canc... 40 6.5
34ref|NM_194322.1| Homo sapiens otoferlin (OTOF), transcript varia... 40 6.5
35ref|NM_194323.1| Homo sapiens otoferlin (OTOF), transcript varia... 40 6.5
36ref|NM_186278.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
37ref|NM_004802.2| Homo sapiens otoferlin (OTOF), transcript varia... 40 6.5
38gb|AF172282.1| Oryza sativa adh1-adh2 region 40 6.5
39ref|NM_194248.1| Homo sapiens otoferlin (OTOF), transcript varia... 40 6.5
40gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
41ref|XM_416405.1| PREDICTED: Gallus gallus similar to Epidermal g... 40 6.5
42gb|BC049635.1| Mus musculus cDNA sequence BC049635, mRNA (cDNA c... 40 6.5
43gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 6.5
44gb|AC113014.9| Mus musculus chromosome 10, clone RP23-174O18, co... 40 6.5
45ref|XM_972653.1| PREDICTED: Mus musculus cDNA sequence BC049635,... 40 6.5
46ref|XM_972609.1| PREDICTED: Mus musculus cDNA sequence BC049635,... 40 6.5
47ref|XM_972706.1| PREDICTED: Mus musculus cDNA sequence BC049635,... 40 6.5
48gb|AC110815.6| Mus musculus BAC clone RP23-2I10 from chromosome ... 40 6.5
49gb|AC129295.4| Mus musculus BAC clone RP24-560M23 from chromosom... 40 6.5
50ref|XM_808983.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 6.5
51ref|XM_814972.1| Trypanosoma cruzi strain CL Brener dispersed ge... 40 6.5
52gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, comple... 40 6.5
53gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b0... 40 6.5
54gb|U00051.1| Caenorhabditis elegans cosmid F42G9, complete sequence 40 6.5
55gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 6.5
56gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 6.5
57gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
58gb|AC123521.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
59emb|AL139036.12| Human DNA sequence from clone RP11-285H24 on ch... 40 6.5
60ref|XM_782170.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.5
61emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.5
62emb|BX640433.1| Bordetella parapertussis strain 12822, complete ... 40 6.5
63emb|BX640413.1| Bordetella pertussis strain Tohama I, complete g... 40 6.5
64emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 6.5
65dbj|AK141954.1| Mus musculus 12 days embryo spinal ganglion cDNA... 40 6.5
66dbj|AK133100.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.5
67ref|NM_001024343.1| Rattus norvegicus similar to hypothetical pr... 40 6.5
68emb|BX931875.2| Gallus gallus finished cDNA, clone ChEST798a16 40 6.5
69dbj|AK052361.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 6.5
70gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, com... 40 6.5
71dbj|AK077002.1| Mus musculus adult male testis cDNA, RIKEN full-... 40 6.5
72ref|NM_064855.1| Caenorhabditis elegans F42G9.8 (F42G9.8) mRNA, ... 40 6.5
73gb|BC082005.1| Rattus norvegicus similar to hypothetical protein... 40 6.5
74dbj|AK086413.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 6.5
75dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
76dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
77gb|AC157660.2| Mus musculus BAC clone RP23-263I16 from chromosom... 40 6.5
78gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, comple... 40 6.5
79gb|AF183187.1|AF183187 Homo sapiens heart/fetal otoferlin (OTOF)... 40 6.5
80gb|AF183186.1|AF183186 Homo sapiens brain otoferlin short isofor... 40 6.5
81gb|AF183185.1|AF183185 Homo sapiens brain otoferlin long isoform... 40 6.5
82gb|AC013262.7| Homo sapiens BAC clone RP11-89C12 from 2, complet... 40 6.5
83dbj|AK111047.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
84emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.5
85gb|BC034531.1| Mus musculus aldehyde dehydrogenase 1 family, mem... 40 6.5
86dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
87gb|AF079526.1|AF079526 Triticum aestivum secretory protein (WAS-... 40 6.5
88gb|AF107403.1|AF107403 Homo sapiens otoferlin (OTOF) mRNA, compl... 40 6.5
89gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
90gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, comple... 40 6.5
91ref|NM_177785.2| Mus musculus cDNA sequence BC049635 (BC049635),... 40 6.5
92gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complet... 40 6.5
93ref|NM_153543.1| Mus musculus aldehyde dehydrogenase 1 family, m... 40 6.5
94emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chr... 40 6.5
95dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 6.5
96emb|AL929015.3| Mouse DNA sequence from clone RP23-412F11 on chr... 40 6.5
97emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chro... 40 6.5 
>emb|AJ617794.1| Secale cereale mRNA for ocs-element binding factor 1 (obf1 gene)
          Length = 827

 Score =  505 bits (255), Expect = e-140
 Identities = 294/306 (96%), Gaps = 2/306 (0%)
 Strand = Plus / Minus

                                                                       
Query: 175 ttcttcctcttgccagccacagctcagctcctacaggggggatcttgaattattgaccca 234
           |||||||||||||||||||||||||||||||||||||||  ||| | |||||||||||||
Sbjct: 659 ttcttcctcttgccagccacagctcagctcctacagggg--atcctcaattattgaccca 602

                                                                       
Query: 235 atcatgactggatggatcagtactggagcatgtgcgtggcggtggcggcgatgggcatgg 294
           ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atcatcactggagggatcagtactggagcatgtgcgtggcggtggcggcgatgggcatgg 542

                                                                       
Query: 295 cggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggcgggcactcct 354
           ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 541 cggtggcagggtacgggatctgccacggccggagcagggggtcatcgggcgggcactcct 482

                                                                       
Query: 355 cctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttgacgg 414
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 481 cctggatgtccatggcgacgccgctgaactcctccacgacgcggagcacctggttgacgg 422

                                                                       
Query: 415 agcgcagcctgtcgccgagctcggcggcgcgcgcccggagcacggtgttctcctggtcga 474
           ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 421 agcgcagccggtcgccgagctcggcggcgcgcgcacggagcacggtgttctcctggtcga 362

                 
Query: 475 cgcgca 480
           ||||||
Sbjct: 361 cgcgca 356



 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                            
Query: 35  ggacgacgacagacacttactgaaacataataa 67
           |||||||||| ||||||||||||||||||||||
Sbjct: 758 ggacgacgacggacacttactgaaacataataa 726
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>gb|AF479057.1| Triticum aestivum ocs-element binding factor 1 mRNA, partial cds
          Length = 633

 Score =  450 bits (227), Expect = e-123
 Identities = 251/259 (96%)
 Strand = Plus / Minus

                                                                       
Query: 222 aattattgacccaatcatgactggatggatcagtactggagcatgtgcgtggcggtggcg 281
           |||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||
Sbjct: 631 aattattgacccaatcatcaccggatcgatcagtactggagcatgtgcgtggcggtggcg 572

                                                                       
Query: 282 gcgatgggcatggcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcg 341
            ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 571 tcgatgggcatggcggtggcagggtacgggatctgccacggccggagcagggggtcgtcg 512

                                                                       
Query: 342 ggcgggcactcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagc 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ggcgggcactcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagc 452

                                                                       
Query: 402 acctggttgacggagcgcagcctgtcgccgagctcggcggcgcgcgcccggagcacggtg 461
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 451 acctggttgacggagcgcagccggtcgccgagctcggcggcgcgcgcccggagcacggtg 392

                              
Query: 462 ttctcctggtcgacgcgca 480
           ||||||||||| |||||||
Sbjct: 391 ttctcctggtccacgcgca 373
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>dbj|AB185280.1| Oryza sativa (japonica cultivar-group) OsOBF1 mRNA for bZIP
           protein, complete cds
          Length = 1277

 Score =  266 bits (134), Expect = 6e-68
 Identities = 173/186 (93%)
 Strand = Plus / Minus

                                                                       
Query: 294 gcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggcgggcactcc 353
           |||| ||| ||| ||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 950 gcggcggcggggcaggggatctgccatggccggagcagcgggtcgtcgggggggcactcc 891

                                                                       
Query: 354 tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttgacg 413
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 890 tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctcgttgacg 831

                                                                       
Query: 414 gagcgcagcctgtcgccgagctcggcggcgcgcgcccggagcacggtgttctcctggtcg 473
             |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || 
Sbjct: 830 ctgcgcagcctgtcgccgagctcggcggcgcgcgcccggagcaccgtgttctcctgctcc 771

                 
Query: 474 acgcgc 479
           ||||||
Sbjct: 770 acgcgc 765



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 251 tcagtactggagcatgtgcgtggcgg 276
           |||||||||||||||||||| |||||
Sbjct: 969 tcagtactggagcatgtgcgcggcgg 944
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  266 bits (134), Expect = 6e-68
 Identities = 173/186 (93%)
 Strand = Plus / Minus

                                                                            
Query: 294      gcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggcgggcactcc 353
                |||| ||| ||| ||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 23001976 gcggcggcggggcaggggatctgccatggccggagcagcgggtcgtcgggggggcactcc 23001917

                                                                            
Query: 354      tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttgacg 413
                |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 23001916 tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctcgttgacg 23001857

                                                                            
Query: 414      gagcgcagcctgtcgccgagctcggcggcgcgcgcccggagcacggtgttctcctggtcg 473
                  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || 
Sbjct: 23001856 ctgcgcagcctgtcgccgagctcggcggcgcgcgcccggagcaccgtgttctcctgctcc 23001797

                      
Query: 474      acgcgc 479
                ||||||
Sbjct: 23001796 acgcgc 23001791



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                        
Query: 349     actcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacct 405
               ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 8766644 actcctcctggatgtccatggcgacgccgctaaactcctcgacgacgtggagcacct 8766700



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 251      tcagtactggagcatgtgcgtggcgg 276
                |||||||||||||||||||| |||||
Sbjct: 23001995 tcagtactggagcatgtgcgcggcgg 23001970
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  266 bits (134), Expect = 6e-68
 Identities = 173/186 (93%)
 Strand = Plus / Minus

                                                                            
Query: 294      gcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggcgggcactcc 353
                |||| ||| ||| ||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 22930167 gcggcggcggggcaggggatctgccatggccggagcagcgggtcgtcgggggggcactcc 22930108

                                                                            
Query: 354      tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttgacg 413
                |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 22930107 tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctcgttgacg 22930048

                                                                            
Query: 414      gagcgcagcctgtcgccgagctcggcggcgcgcgcccggagcacggtgttctcctggtcg 473
                  |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || 
Sbjct: 22930047 ctgcgcagcctgtcgccgagctcggcggcgcgcgcccggagcaccgtgttctcctgctcc 22929988

                      
Query: 474      acgcgc 479
                ||||||
Sbjct: 22929987 acgcgc 22929982



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Plus

                                                                        
Query: 349     actcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacct 405
               ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 8766527 actcctcctggatgtccatggcgacgccgctaaactcctcgacgacgtggagcacct 8766583



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 251      tcagtactggagcatgtgcgtggcgg 276
                |||||||||||||||||||| |||||
Sbjct: 22930186 tcagtactggagcatgtgcgcggcgg 22930161
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>emb|AL935072.4|CNS08CCO Oryza sativa chromosome 12, . BAC OSJNBa0028L05 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 155568

 Score =  266 bits (134), Expect = 6e-68
 Identities = 173/186 (93%)
 Strand = Plus / Minus

                                                                          
Query: 294    gcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggcgggcactcc 353
              |||| ||| ||| ||||||||||||| || |||||||| ||||||||||| |||||||||
Sbjct: 111253 gcggcggcggggcaggggatctgccatggccggagcagcgggtcgtcgggggggcactcc 111194

                                                                          
Query: 354    tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttgacg 413
              |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 111193 tcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctcgttgacg 111134

                                                                          
Query: 414    gagcgcagcctgtcgccgagctcggcggcgcgcgcccggagcacggtgttctcctggtcg 473
                |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || 
Sbjct: 111133 ctgcgcagcctgtcgccgagctcggcggcgcgcgcccggagcaccgtgttctcctgctcc 111074

                    
Query: 474    acgcgc 479
              ||||||
Sbjct: 111073 acgcgc 111068



 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 251    tcagtactggagcatgtgcgtggcgg 276
              |||||||||||||||||||| |||||
Sbjct: 111272 tcagtactggagcatgtgcgcggcgg 111247
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>emb|X62745.1|ZMOCSBFA Z.mays OBF1 mRNA for ocs-element binding factor 1
          Length = 1457

 Score =  218 bits (110), Expect = 1e-53
 Identities = 173/194 (89%)
 Strand = Plus / Minus

                                                                        
Query: 285  atgggcatggcggtggcagggtaggggatctgccacggtcggagcagggggtcgtcgggc 344
            |||||||||||||  || |||||||| | |||||| || || ||||| |||||||| | |
Sbjct: 1089 atgggcatggcggcagccgggtagggcagctgccagggacgcagcagcgggtcgtccgcc 1030

                                                                        
Query: 345  gggcactcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacc 404
            ||   |||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1029 ggcatctcctcctggatgtccatggcgacgccgctgaactcctcgacgaggcggagcacc 970

                                                                        
Query: 405  tggttgacggagcgcagcctgtcgccgagctcggcggcgcgcgcccggagcacggtgttc 464
            | |||||||||||| || | ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 969  tcgttgacggagcggaggcggtcgccgagctcggcggcgcgggcccggagcacggtgttc 910

                          
Query: 465  tcctggtcgacgcg 478
            ||||| ||||||||
Sbjct: 909  tcctgctcgacgcg 896
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>gb|AY103652.1| Zea mays PCO086174 mRNA sequence
          Length = 1583

 Score =  210 bits (106), Expect = 3e-51
 Identities = 179/202 (88%), Gaps = 1/202 (0%)
 Strand = Plus / Minus

                                                                        
Query: 278  ggcggcgatgggcatggcggtggcagggtaggggatctgccacggtcggagcagggggtc 337
            |||| |||||||||||||||  || |||||||| | |||||| || || ||||| |||||
Sbjct: 1192 ggcgccgatgggcatggcggcagccgggtagggcagctgccagggacgcagcagcgggtc 1133

                                                                        
Query: 338  gtcgggcgggcactcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcg 397
            ||| | |||   |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1132 gtccgccggcatctcctcctggatgtccatggcgacgccgctgaactcctcgacgaggcg 1073

                                                                        
Query: 398  gagcacctggttgacggagcgcagcctg-tcgccgagctcggcggcgcgcgcccggagca 456
            |||||||| |||||||||||| || | | |||||||||||||||||||| ||||||||||
Sbjct: 1072 gagcacctcgttgacggagcggaggcggctcgccgagctcggcggcgcgggcccggagca 1013

                                  
Query: 457  cggtgttctcctggtcgacgcg 478
            ||||||||||||| ||||||||
Sbjct: 1012 cggtgttctcctgctcgacgcg 991
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>gb|BT018824.1| Zea mays clone EL01N0532F03.d mRNA sequence
          Length = 1409

 Score =  184 bits (93), Expect = 2e-43
 Identities = 174/201 (86%)
 Strand = Plus / Minus

                                                                        
Query: 278  ggcggcgatgggcatggcggtggcagggtaggggatctgccacggtcggagcagggggtc 337
            |||| |||||||||||||||  || |||||||| | |||||| || || ||||| |||||
Sbjct: 1023 ggcgccgatgggcatggcggcagccgggtagggcagctgccagggacgcagcagcgggtc 964

                                                                        
Query: 338  gtcgggcgggcactcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcg 397
            ||| | |||   |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 963  gtccgccggcatctcctcctggatgtccatggcgacgccgctgaactcctcgacgaggcg 904

                                                                        
Query: 398  gagcacctggttgacggagcgcagcctgtcgccgagctcggcggcgcgcgcccggagcac 457
            |||||||| || ||||||||| || | ||||||||||||||||||    || ||||||||
Sbjct: 903  gagcacctagtggacggagcggaggcggtcgccgagctcggcggctttagcgcggagcac 844

                                 
Query: 458  ggtgttctcctggtcgacgcg 478
            |||||||||||| ||||||||
Sbjct: 843  ggtgttctcctgctcgacgcg 823
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>gb|AY108024.1| Zea mays PCO086173 mRNA sequence
          Length = 469

 Score =  184 bits (93), Expect = 2e-43
 Identities = 120/129 (93%)
 Strand = Plus / Minus

                                                                       
Query: 351 tcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctggttg 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 206 tcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacctcgttg 147

                                                                       
Query: 411 acggagcgcagcctgtcgccgagctcggcggcgcgcgcccggagcacggtgttctcctgg 470
           |||||||| || | | ||||||||||||||||||| || |||||||||| ||||||||| 
Sbjct: 146 acggagcggaggcgggcgccgagctcggcggcgcgagcgcggagcacggcgttctcctgc 87

                    
Query: 471 tcgacgcgc 479
           |||||||||
Sbjct: 86  tcgacgcgc 78
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>emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa0036A15 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 195500

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 55/57 (96%)
 Strand = Plus / Minus

                                                                      
Query: 349   actcctcctggatgtccatggcgacgccgctgaactcctcgacgacgcggagcacct 405
             ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 75525 actcctcctggatgtccatggcgacgccgctaaactcctcgacgacgtggagcacct 75469
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 433    gctcggcggcgcgcgcccggagcacgg 459
              |||||||||||||||| ||||||||||
Sbjct: 824551 gctcggcggcgcgcgcgcggagcacgg 824525
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 433     gctcggcggcgcgcgcccggagcacgg 459
               |||||||||||||||| ||||||||||
Sbjct: 2144779 gctcggcggcgcgcgcgcggagcacgg 2144753
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 433     gctcggcggcgcgcgcccggagcacgg 459
               |||||||||||||||| ||||||||||
Sbjct: 1718064 gctcggcggcgcgcgcgcggagcacgg 1718038
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                          
Query: 427     cgccgagctcggcggcgcgcgcccgga 453
               ||||||| |||||||||||||||||||
Sbjct: 5653620 cgccgagttcggcggcgcgcgcccgga 5653646



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 436     cggcggcgcgcgcccggagca 456
               |||||||||||||||||||||
Sbjct: 5002843 cggcggcgcgcgcccggagca 5002863
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>gb|AC093363.12| Mus musculus chromosome 7, clone RP23-60O3, complete sequence
          Length = 254081

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 181    ctcttgccagccacagctcagctcct 206
              |||| |||||||||||||||||||||
Sbjct: 223230 ctctggccagccacagctcagctcct 223205
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>ref|XM_655381.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2869.2), mRNA
          Length = 1896

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 381 aactcctcgacgacgcggagcacctg 406
           |||||||||||| |||||||||||||
Sbjct: 218 aactcctcgacgtcgcggagcacctg 193
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>ref|XM_545387.2| PREDICTED: Canis familiaris similar to germinal histone H4 gene
           (LOC488265), mRNA
          Length = 714

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 427 cgccgagctcggcggcgcgcgcccgg 452
           ||||||||||||||||| ||||||||
Sbjct: 235 cgccgagctcggcggcgagcgcccgg 260
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 430     cgagctcggcggcgcgcgcccggagc 455
               ||||||||||| ||||||||||||||
Sbjct: 4531563 cgagctcggcgacgcgcgcccggagc 4531538
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>gb|AC174642.2| Mus musculus BAC clone RP24-362N12 from chromosome 7, complete sequence
          Length = 144527

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 181   ctcttgccagccacagctcagctcct 206
             |||| |||||||||||||||||||||
Sbjct: 83242 ctctggccagccacagctcagctcct 83267
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>ref|XM_478229.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1266

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 431 gagctcggcggcgcgcgcccggagc 455
           ||||||| |||||||||||||||||
Sbjct: 961 gagctcgccggcgcgcgcccggagc 985
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 360     atgtccatggcgacgccgctg 380
               |||||||||||||||||||||
Sbjct: 4003122 atgtccatggcgacgccgctg 4003102
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>emb|AL353693.19| Human DNA sequence from clone RP11-470P21 on chromosome 9 Contains part
             of the APBA1 gene for myloid beta (A4) precursor
             protein-binding, family A, member 1 (X11) and one CpG
             island, complete sequence
          Length = 63701

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 188   cagccacagctcagctcctac 208
             |||||||||||||||||||||
Sbjct: 11713 cagccacagctcagctcctac 11733
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 426     tcgccgagctcggcggcgcgc 446
               |||||||||||||||||||||
Sbjct: 1565225 tcgccgagctcggcggcgcgc 1565205
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>gb|AC090484.4| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0061L19, from chromosome 3, complete sequence
          Length = 153322

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 360   atgtccatggcgacgccgctg 380
             |||||||||||||||||||||
Sbjct: 96246 atgtccatggcgacgccgctg 96266
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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 419     cagcctgtcgccgagctcggcggcg 443
               ||||||||||||||| |||||||||
Sbjct: 2646441 cagcctgtcgccgagttcggcggcg 2646465
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 431      gagctcggcggcgcgcgcccggagc 455
                ||||||| |||||||||||||||||
Sbjct: 18713256 gagctcgccggcgcgcgcccggagc 18713280



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 436     cggcggcgcgcgcccggagcacgg 459
               ||||||||||||||||||| ||||
Sbjct: 2289642 cggcggcgcgcgcccggaggacgg 2289665
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 360     atgtccatggcgacgccgctg 380
               |||||||||||||||||||||
Sbjct: 4003233 atgtccatggcgacgccgctg 4003213
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>dbj|AP005177.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0055I24
          Length = 155872

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 431   gagctcggcggcgcgcgcccggagc 455
             ||||||| |||||||||||||||||
Sbjct: 45544 gagctcgccggcgcgcgcccggagc 45568
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>dbj|AK108797.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-C03, full
           insert sequence
          Length = 1266

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 431 gagctcggcggcgcgcgcccggagc 455
           ||||||| |||||||||||||||||
Sbjct: 961 gagctcgccggcgcgcgcccggagc 985
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>tpe|BN000631.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx102 gene for
            class III peroxidase 102 precursor, exons 1-3
          Length = 1252

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 431  gagctcggcggcgcgcgcccggagc 455
            ||||||| |||||||||||||||||
Sbjct: 1112 gagctcgccggcgcgcgcccggagc 1136
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>gb|AC171178.2| Gallus gallus BAC clone CH261-77I20 from chromosome ul, complete
             sequence
          Length = 237797

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 28/29 (96%), Gaps = 1/29 (3%)
 Strand = Plus / Plus

                                          
Query: 54    ctgaaacataataataaacacaacatata 82
             |||||||| ||||||||||||||||||||
Sbjct: 48381 ctgaaaca-aataataaacacaacatata 48408
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>gb|AC153508.2| Mus musculus 10 BAC RP23-233B6 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 190780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 162  gctcttcttggttttcttcc 181
            ||||||||||||||||||||
Sbjct: 9881 gctcttcttggttttcttcc 9900
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>ref|NM_194322.1| Homo sapiens otoferlin (OTOF), transcript variant 3, mRNA
          Length = 5124

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 188 cagccacagctcagctcctacagg 211
           ||||||||||||||||||| ||||
Sbjct: 391 cagccacagctcagctcctccagg 368
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>ref|NM_194323.1| Homo sapiens otoferlin (OTOF), transcript variant 4, mRNA
          Length = 4772

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 188 cagccacagctcagctcctacagg 211
           ||||||||||||||||||| ||||
Sbjct: 297 cagccacagctcagctcctccagg 274
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>ref|NM_186278.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1242

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 436 cggcggcgcgcgcccggagcacgg 459
           ||||||||||||||||||| ||||
Sbjct: 171 cggcggcgcgcgcccggaggacgg 194
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>ref|NM_004802.2| Homo sapiens otoferlin (OTOF), transcript variant 2, mRNA
          Length = 4970

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 188 cagccacagctcagctcctacagg 211
           ||||||||||||||||||| ||||
Sbjct: 297 cagccacagctcagctcctccagg 274
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>gb|AF172282.1| Oryza sativa adh1-adh2 region
          Length = 339485

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 271    tggcggtggcggcgatgggcatgg 294
              ||||||||||||||||||| ||||
Sbjct: 143278 tggcggtggcggcgatggggatgg 143301
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>ref|NM_194248.1| Homo sapiens otoferlin (OTOF), transcript variant 1, mRNA
          Length = 7172

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 188  cagccacagctcagctcctacagg 211
            ||||||||||||||||||| ||||
Sbjct: 2439 cagccacagctcagctcctccagg 2416
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>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04,
             complete sequence
          Length = 88812

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 439   cggcgcgcgcccggagcacg 458
             ||||||||||||||||||||
Sbjct: 22345 cggcgcgcgcccggagcacg 22326
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>ref|XM_416405.1| PREDICTED: Gallus gallus similar to Epidermal growth factor receptor
            kinase substrate EPS8 (LOC418174), mRNA
          Length = 2675

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 166  ttcttggttttcttcctctt 185
            ||||||||||||||||||||
Sbjct: 1102 ttcttggttttcttcctctt 1083
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>gb|BC049635.1| Mus musculus cDNA sequence BC049635, mRNA (cDNA clone MGC:58387
           IMAGE:6774793), complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 ttcttggttttcttcctctt 185
           ||||||||||||||||||||
Sbjct: 883 ttcttggttttcttcctctt 864
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 263    catgtgcgtggcggtggcggcgat 286
              ||||||||||||| ||||||||||
Sbjct: 586335 catgtgcgtggcgatggcggcgat 586358
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>gb|AC113014.9| Mus musculus chromosome 10, clone RP23-174O18, complete sequence
          Length = 187065

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 162    gctcttcttggttttcttcc 181
              ||||||||||||||||||||
Sbjct: 154014 gctcttcttggttttcttcc 154033
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>ref|XM_972653.1| PREDICTED: Mus musculus cDNA sequence BC049635, transcript variant
           4 (BC049635), mRNA
          Length = 1543

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 ttcttggttttcttcctctt 185
           ||||||||||||||||||||
Sbjct: 779 ttcttggttttcttcctctt 760
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>ref|XM_972609.1| PREDICTED: Mus musculus cDNA sequence BC049635, transcript variant
           3 (BC049635), mRNA
          Length = 1544

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 ttcttggttttcttcctctt 185
           ||||||||||||||||||||
Sbjct: 777 ttcttggttttcttcctctt 758
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>ref|XM_972706.1| PREDICTED: Mus musculus cDNA sequence BC049635, transcript variant
           2 (BC049635), mRNA
          Length = 1640

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 ttcttggttttcttcctctt 185
           ||||||||||||||||||||
Sbjct: 873 ttcttggttttcttcctctt 854
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>gb|AC110815.6| Mus musculus BAC clone RP23-2I10 from chromosome 12, complete sequence
          Length = 186797

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/35 (91%), Gaps = 2/35 (5%)
 Strand = Plus / Plus

                                                
Query: 52    tactgaaacataataataaacacaacatatagcag 86
             |||||||||||||||  ||| ||||||||||||||
Sbjct: 99860 tactgaaacataata--aaaaacaacatatagcag 99892
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>gb|AC129295.4| Mus musculus BAC clone RP24-560M23 from chromosome 1, complete
            sequence
          Length = 121538

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   ataataataaacacaacata 80
            ||||||||||||||||||||
Sbjct: 3295 ataataataaacacaacata 3314
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>ref|XM_808983.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053511665.50) partial mRNA
          Length = 10428

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 265  tgtgcgtggcggtggcggcg 284
            ||||||||||||||||||||
Sbjct: 4944 tgtgcgtggcggtggcggcg 4925
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>ref|XM_814972.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053509287.140) partial mRNA
          Length = 10401

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 270  gtggcggtggcggcgatgggcatggcgg 297
            |||||||||||||||||||  |||||||
Sbjct: 4906 gtggcggtggcggcgatggcgatggcgg 4879
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>gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, complete sequence
          Length = 184032

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 5      tattactgttacaaaatagc 24
              ||||||||||||||||||||
Sbjct: 178446 tattactgttacaaaatagc 178427
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>gb|DQ459071.1| Sorghum bicolor cultivar BTx623 clone BAC c0156b06, complete sequence
          Length = 112592

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 432  agctcggcggcgcgcgcccg 451
            ||||||||||||||||||||
Sbjct: 5114 agctcggcggcgcgcgcccg 5095
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>gb|U00051.1| Caenorhabditis elegans cosmid F42G9, complete sequence
          Length = 34008

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 220   tgaattattgacccaatcat 239
             ||||||||||||||||||||
Sbjct: 16067 tgaattattgacccaatcat 16048
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 418     gcagcctgtcgccgagctcggcggcgcgcgcc 449
               |||| ||||||||| ||||||||||| |||||
Sbjct: 1960196 gcaggctgtcgccgtgctcggcggcgagcgcc 1960165
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 456     acggtgttctcctggtcgac 475
               ||||||||||||||||||||
Sbjct: 3630845 acggtgttctcctggtcgac 3630864
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>gb|AC123522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0051B13, complete sequence
          Length = 178000

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 271   tggcggtggcggcgatgggcatgg 294
             ||||||||||||||||||| ||||
Sbjct: 77857 tggcggtggcggcgatggggatgg 77834
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>gb|AC123521.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
            OSJNBa0037P04, complete sequence
          Length = 139693

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 271  tggcggtggcggcgatgggcatgg 294
            ||||||||||||||||||| ||||
Sbjct: 5299 tggcggtggcggcgatggggatgg 5276
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>emb|AL139036.12| Human DNA sequence from clone RP11-285H24 on chromosome 13q22.1-22.3
             Contains the 5' end of the KLF12 gene for Kruppel-like
             factor 12, complete sequence
          Length = 109810

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 166   ttcttggttttcttcctctt 185
             ||||||||||||||||||||
Sbjct: 72449 ttcttggttttcttcctctt 72430
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>ref|XM_782170.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein MICAL-3
            (LOC582210), partial mRNA
          Length = 4097

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 369  gcgacgccgctgaactcctcgacg 392
            ||||||||||||| ||||||||||
Sbjct: 2003 gcgacgccgctgatctcctcgacg 1980



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 369  gcgacgccgctgaactcctcgacg 392
            ||||||||||||| ||||||||||
Sbjct: 1760 gcgacgccgctgatctcctcgacg 1737
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>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 270    gtggcggtggcggcgatgggcatggcgg 297
              ||||||||||||| |||||||| |||||
Sbjct: 211665 gtggcggtggcggggatgggcacggcgg 211638
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>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14
          Length = 349305

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 270    gtggcggtggcggcgatgggcatggcgg 297
              ||||||||||||| |||||||| |||||
Sbjct: 148155 gtggcggtggcggggatgggcacggcgg 148128
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>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 270    gtggcggtggcggcgatgggcatggcgg 297
              ||||||||||||| |||||||| |||||
Sbjct: 205888 gtggcggtggcggggatgggcacggcgg 205915
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    cgccgctgaactcctcgacg 392
              ||||||||||||||||||||
Sbjct: 130912 cgccgctgaactcctcgacg 130931
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>dbj|AK141954.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130074P12 product:Similar to
            10-formyltetrahydrofolate dehydrogenase, full insert
            sequence
          Length = 5982

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gctcttcttggttttcttcc 181
            ||||||||||||||||||||
Sbjct: 1657 gctcttcttggttttcttcc 1638
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>dbj|AK133100.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4930572P17 product:hypothetical
           Serine-rich region profile containing protein, full
           insert sequence
          Length = 1365

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 ttcttggttttcttcctctt 185
           ||||||||||||||||||||
Sbjct: 813 ttcttggttttcttcctctt 794
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>ref|NM_001024343.1| Rattus norvegicus similar to hypothetical protein 4931430D02
           (LOC500445), mRNA
          Length = 1346

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 ttcttggttttcttcctctt 185
           ||||||||||||||||||||
Sbjct: 735 ttcttggttttcttcctctt 716
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>emb|BX931875.2| Gallus gallus finished cDNA, clone ChEST798a16
          Length = 762

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 ttcttggttttcttcctctt 185
           ||||||||||||||||||||
Sbjct: 758 ttcttggttttcttcctctt 739
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>dbj|AK052361.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330038I09 product:similar to
            10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE (EC 1.5.1.6)
            (10-FTHFDH) (FBP-CI) [Rattus norvegicus], full insert
            sequence
          Length = 3939

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gctcttcttggttttcttcc 181
            ||||||||||||||||||||
Sbjct: 1587 gctcttcttggttttcttcc 1568
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>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence
          Length = 140234

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 439    cggcgcgcgcccggagcacg 458
              ||||||||||||||||||||
Sbjct: 122458 cggcgcgcgcccggagcacg 122477
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>dbj|AK077002.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4931430D02 product:hypothetical protein,
           full insert sequence
          Length = 1659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 ttcttggttttcttcctctt 185
           ||||||||||||||||||||
Sbjct: 892 ttcttggttttcttcctctt 873
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>ref|NM_064855.1| Caenorhabditis elegans F42G9.8 (F42G9.8) mRNA, complete cds
          Length = 780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 220 tgaattattgacccaatcat 239
           ||||||||||||||||||||
Sbjct: 114 tgaattattgacccaatcat 95
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>gb|BC082005.1| Rattus norvegicus similar to hypothetical protein 4931430D02, mRNA
           (cDNA clone MGC:94253 IMAGE:7131603), complete cds
          Length = 1346

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 ttcttggttttcttcctctt 185
           ||||||||||||||||||||
Sbjct: 735 ttcttggttttcttcctctt 716
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>dbj|AK086413.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:D930026K06 product:weakly similar to
            10-FORMYLTETRAHYDROFOLATE DEHYDROGENASE (EC 1.5.1.6)
            (10-FTHFDH) [Homo sapiens], full insert sequence
          Length = 3512

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gctcttcttggttttcttcc 181
            ||||||||||||||||||||
Sbjct: 1640 gctcttcttggttttcttcc 1621
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 271     tggcggtggcggcgatgggcatgg 294
               ||||||||||||||||||| ||||
Sbjct: 5532739 tggcggtggcggcgatggggatgg 5532716
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 439     cggcgcgcgcccggagcacg 458
               ||||||||||||||||||||
Sbjct: 2744019 cggcgcgcgcccggagcacg 2744000
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>gb|AC157660.2| Mus musculus BAC clone RP23-263I16 from chromosome 1, complete sequence
          Length = 192026

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    ataataataaacacaacata 80
             ||||||||||||||||||||
Sbjct: 96762 ataataataaacacaacata 96743
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>gb|AC093378.5| Homo sapiens BAC clone RP11-296O15 from 2, complete sequence
          Length = 63849

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 188   cagccacagctcagctcctacagg 211
             ||||||||||||||||||| ||||
Sbjct: 61211 cagccacagctcagctcctccagg 61234
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>gb|AF183187.1|AF183187 Homo sapiens heart/fetal otoferlin (OTOF) mRNA, complete cds
          Length = 4772

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 188 cagccacagctcagctcctacagg 211
           ||||||||||||||||||| ||||
Sbjct: 297 cagccacagctcagctcctccagg 274
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>gb|AF183186.1|AF183186 Homo sapiens brain otoferlin short isoform (OTOF) mRNA, complete
           cds
          Length = 5124

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 188 cagccacagctcagctcctacagg 211
           ||||||||||||||||||| ||||
Sbjct: 391 cagccacagctcagctcctccagg 368
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>gb|AF183185.1|AF183185 Homo sapiens brain otoferlin long isoform (OTOF) mRNA, complete cds
          Length = 7172

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 188  cagccacagctcagctcctacagg 211
            ||||||||||||||||||| ||||
Sbjct: 2439 cagccacagctcagctcctccagg 2416
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>gb|AC013262.7| Homo sapiens BAC clone RP11-89C12 from 2, complete sequence
          Length = 146559

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 61     ataataataaacacaacata 80
              ||||||||||||||||||||
Sbjct: 102509 ataataataaacacaacata 102528
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>dbj|AK111047.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-175-C01, full
           insert sequence
          Length = 668

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 439 cggcgcgcgcccggagcacg 458
           ||||||||||||||||||||
Sbjct: 99  cggcgcgcgcccggagcacg 80
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 457     cggtgttctcctggtcgacgcgca 480
               |||||||||||||||||| |||||
Sbjct: 1873855 cggtgttctcctggtcgaagcgca 1873832
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>gb|BC034531.1| Mus musculus aldehyde dehydrogenase 1 family, member L2, mRNA (cDNA
            clone MGC:19039 IMAGE:4188055), complete cds
          Length = 5959

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gctcttcttggttttcttcc 181
            ||||||||||||||||||||
Sbjct: 1618 gctcttcttggttttcttcc 1599
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>dbj|AP003824.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1343_B12
          Length = 121362

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 436   cggcggcgcgcgcccggagcacgg 459
             ||||||||||||||||||| ||||
Sbjct: 63341 cggcggcgcgcgcccggaggacgg 63364
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>gb|AF079526.1|AF079526 Triticum aestivum secretory protein (WAS-2) mRNA, complete cds
          Length = 894

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 368 ggcgacgccgctgaactcctcgacgacg 395
           ||||||||||||||  ||||||||||||
Sbjct: 304 ggcgacgccgctgatgtcctcgacgacg 277
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>gb|AF107403.1|AF107403 Homo sapiens otoferlin (OTOF) mRNA, complete cds
          Length = 4970

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 188 cagccacagctcagctcctacagg 211
           ||||||||||||||||||| ||||
Sbjct: 297 cagccacagctcagctcctccagg 274
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 271     tggcggtggcggcgatgggcatgg 294
               ||||||||||||||||||| ||||
Sbjct: 5599216 tggcggtggcggcgatggggatgg 5599193
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>gb|AC135015.3| Mus musculus BAC clone RP24-227L14 from 8, complete sequence
          Length = 169193

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 179    tcctcttgccagccacagctcagctcct 206
              ||||||| ||| ||||||||||||||||
Sbjct: 123914 tcctcttcccacccacagctcagctcct 123887
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>ref|NM_177785.2| Mus musculus cDNA sequence BC049635 (BC049635), mRNA
          Length = 1659

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 166 ttcttggttttcttcctctt 185
           ||||||||||||||||||||
Sbjct: 892 ttcttggttttcttcctctt 873
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>gb|AC126930.4| Mus musculus BAC clone RP24-547J4 from 8, complete sequence
          Length = 191241

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 179   tcctcttgccagccacagctcagctcct 206
             ||||||| ||| ||||||||||||||||
Sbjct: 14073 tcctcttcccacccacagctcagctcct 14046
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>ref|NM_153543.1| Mus musculus aldehyde dehydrogenase 1 family, member L2 (Aldh1l2),
            mRNA
          Length = 5959

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 162  gctcttcttggttttcttcc 181
            ||||||||||||||||||||
Sbjct: 1618 gctcttcttggttttcttcc 1599
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>emb|CT030126.6| Mouse DNA sequence from clone RP23-430F12 on chromosome 12, complete
              sequence
          Length = 208848

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 32/35 (91%), Gaps = 2/35 (5%)
 Strand = Plus / Plus

                                                 
Query: 52     tactgaaacataataataaacacaacatatagcag 86
              |||||||||||||||  ||| ||||||||||||||
Sbjct: 168903 tactgaaacataata--aaaaacaacatatagcag 168935
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 279     gcggcgatgggcatggcggt 298
               ||||||||||||||||||||
Sbjct: 1773687 gcggcgatgggcatggcggt 1773706
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>emb|AL929015.3| Mouse DNA sequence from clone RP23-412F11 on chromosome 2, complete
             sequence
          Length = 142296

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 163   ctcttcttggttttcttcct 182
             ||||||||||||||||||||
Sbjct: 97241 ctcttcttggttttcttcct 97260
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>emb|AL672276.9| Mouse DNA sequence from clone RP23-124L1 on chromosome 4, complete
            sequence
          Length = 208030

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 166  ttcttggttttcttcctctt 185
            ||||||||||||||||||||
Sbjct: 7728 ttcttggttttcttcctctt 7747


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,187,119
Number of Sequences: 3902068
Number of extensions: 4187119
Number of successful extensions: 97933
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 98
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 95482
Number of HSP's gapped (non-prelim): 2448
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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