Clone Name | rbart32f05 |
---|---|
Clone Library Name | barley_pub |
>emb|AL669859.5| Mouse DNA sequence from clone RP23-167D6 on chromosome 11, complete sequence Length = 155196 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 60 agttttatattagggtttaatg 81 |||||||||||||||||||||| Sbjct: 54624 agttttatattagggtttaatg 54603
>gb|AC010846.13| Drosophila melanogaster clone BACR13G13, complete sequence Length = 192540 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tccgtatgttgcccacatcgg 56 ||||||||||||||||||||| Sbjct: 159801 tccgtatgttgcccacatcgg 159781
>ref|NM_167518.1| Drosophila melanogaster Traf3 CG4394-RB, transcript variant B (Traf3), mRNA Length = 1809 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tccgtatgttgcccacatcgg 56 ||||||||||||||||||||| Sbjct: 340 tccgtatgttgcccacatcgg 320
>ref|NM_167517.1| Drosophila melanogaster Traf3 CG4394-RA, transcript variant A (Traf3), mRNA Length = 2249 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tccgtatgttgcccacatcgg 56 ||||||||||||||||||||| Sbjct: 780 tccgtatgttgcccacatcgg 760
>ref|NM_132898.2| Drosophila melanogaster Traf3 CG4394-RC, transcript variant C (Traf3), mRNA Length = 2337 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tccgtatgttgcccacatcgg 56 ||||||||||||||||||||| Sbjct: 868 tccgtatgttgcccacatcgg 848
>gb|AY052057.1| Drosophila melanogaster LP08566 full length cDNA Length = 2352 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tccgtatgttgcccacatcgg 56 ||||||||||||||||||||| Sbjct: 868 tccgtatgttgcccacatcgg 848
>gb|AC010920.11|AC010920 Drosophila melanogaster, chromosome X, region 14C-14D, BAC clone BACR47D09, complete sequence Length = 166935 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tccgtatgttgcccacatcgg 56 ||||||||||||||||||||| Sbjct: 63847 tccgtatgttgcccacatcgg 63827
>gb|AE003502.4| Drosophila melanogaster chromosome X, section 54 of 74 of the complete sequence Length = 304712 Score = 42.1 bits (21), Expect = 0.88 Identities = 21/21 (100%) Strand = Plus / Minus Query: 36 tccgtatgttgcccacatcgg 56 ||||||||||||||||||||| Sbjct: 83129 tccgtatgttgcccacatcgg 83109
>gb|AC160127.2| Mus musculus BAC clone RP23-295O2 from chromosome 9, complete sequence Length = 205289 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 101 acattttacatgaggagtac 120 |||||||||||||||||||| Sbjct: 86957 acattttacatgaggagtac 86976
>gb|AY569234.1| Adelotettix gigas 16S ribosomal RNA gene, partial sequence; mitochondrial Length = 509 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 ttttatattagggtttaatg 81 |||||||||||||||||||| Sbjct: 257 ttttatattagggtttaatg 276
>emb|Y11658.1|ECVHL88 Equus caballus DNA for CA microsatellite, locus ECVHL88 Length = 595 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 107 tacatgaggagtacacacac 126 |||||||||||||||||||| Sbjct: 317 tacatgaggagtacacacac 298 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,987,133 Number of Sequences: 3902068 Number of extensions: 1987133 Number of successful extensions: 31295 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31283 Number of HSP's gapped (non-prelim): 12 length of query: 267 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 245 effective length of database: 17,147,199,772 effective search space: 4201063944140 effective search space used: 4201063944140 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)