ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467017.1| Oryza sativa (japonica cultivar-group), mRNA 192 8e-46
2ref|XM_467026.1| Oryza sativa (japonica cultivar-group), mRNA 192 8e-46
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 192 8e-46
4dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic D... 192 8e-46
5dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic D... 192 8e-46
6dbj|AK100979.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 8e-46
7gb|AF272749.1|AF272749 Zea mays kinesin heavy chain (KIN1) mRNA,... 178 1e-41
8gb|AF272759.1|AF272759 Zea mays kinesin heavy chain (KIN15) mRNA... 165 2e-37
9gb|AY108256.1| Zea mays PCO127685 mRNA sequence 165 2e-37
10gb|AY107187.1| Zea mays PCO082735 mRNA sequence 143 7e-31
11ref|XM_473345.1| Oryza sativa (japonica cultivar-group), predic... 54 5e-04
12emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4,... 54 5e-04
13emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4,... 54 5e-04
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 54 5e-04
15dbj|AK102262.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
16ref|NM_183466.2| Oryza sativa (japonica cultivar-group), mRNA 44 0.45
17dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.45
18gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA,... 44 0.45
19dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.45
20dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.45
21dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.45
22dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.45
23dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.45
24gb|AC011992.3| Homo sapiens BAC clone CTD-2327A23 from 7, comple... 42 1.8
25emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome 42 1.8
26emb|BX548028.5| Zebrafish DNA sequence from clone CH211-260H24 i... 42 1.8
27dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 42 1.8
28gb|AC121359.8| Mus musculus chromosome 15, clone RP23-138I21, co... 42 1.8
29gb|AC119264.8| Mus musculus chromosome 15, clone RP24-289J12, co... 42 1.8
30ref|XM_631998.1| Dictyostelium discoideum ABC transporter C fami... 40 7.0
31gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 7.0
32gb|AC126253.3| Mus musculus BAC clone RP24-119M15 from chromosom... 40 7.0
33emb|AL117350.12|HSJ803J11 Human DNA sequence from clone RP4-803J... 40 7.0
34emb|AL078611.1|HSB5E3 Human DNA sequence from clone SC22CB-5E3 o... 40 7.0
35ref|XM_969503.1| PREDICTED: Tribolium castaneum similar to CG692... 40 7.0
36gb|AC148649.14| Gasterosteus aculeatus clone uogacrs-1f3-1, comp... 40 7.0
37gb|AF474335.1| Dictyostelium discoideum ABC transporter ABCC.3 (... 40 7.0
38dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
39gb|AY206718.1| Homo sapiens peroxisome proliferative activated r... 40 7.0
40dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
41dbj|AK100918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
42dbj|AK072633.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
43emb|CR391908.15| Zebrafish DNA sequence from clone DKEY-225E11 i... 40 7.0
44dbj|AK060588.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0 
>ref|XM_467017.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1953

 Score =  192 bits (97), Expect = 8e-46
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Minus

                                                                        
Query: 303  aacgaggggatcccatatctccagccgttggaggagcgccg---ggtggggggctgctgc 359
            ||||| |||||||| |||||||||||||||||||| |||||   ||| ||  ||||||||
Sbjct: 1946 aacgaagggatcccgtatctccagccgttggaggatcgccgccgggtcggctgctgctgc 1887

                                                                        
Query: 360  ggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtagcccgatc 419
            ||||||||||||||||||||||||||| | || || || || |||||||| |||||||||
Sbjct: 1886 ggcgcgaagctgagcccgaacatctccttgagaacttggcctggctcctggagcccgatc 1827

                                                                        
Query: 420  agcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctccgtccac 479
            |||||||| |||||||||||||||||||| || |||||||||||  |  |||| ||||| 
Sbjct: 1826 agcttggcgaccagggacgcgctctccctgacatgctccaggtctttcgtctcggtccag 1767

                                                   
Query: 480  agccgccgagccacctgcagcttcctcttcttggagtcc 518
            || || ||||| |||||||| |||||| |||||||||||
Sbjct: 1766 aggcggcgagcgacctgcagtttcctcctcttggagtcc 1728
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>ref|XM_467026.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3149

 Score =  192 bits (97), Expect = 8e-46
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Minus

                                                                        
Query: 303  aacgaggggatcccatatctccagccgttggaggagcgccg---ggtggggggctgctgc 359
            ||||| |||||||| |||||||||||||||||||| |||||   ||| ||  ||||||||
Sbjct: 2913 aacgaagggatcccgtatctccagccgttggaggatcgccgccgggtcggctgctgctgc 2854

                                                                        
Query: 360  ggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtagcccgatc 419
            ||||||||||||||||||||||||||| | || || || || |||||||| |||||||||
Sbjct: 2853 ggcgcgaagctgagcccgaacatctccttgagaacttggcctggctcctggagcccgatc 2794

                                                                        
Query: 420  agcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctccgtccac 479
            |||||||| |||||||||||||||||||| || |||||||||||  |  |||| ||||| 
Sbjct: 2793 agcttggcgaccagggacgcgctctccctgacatgctccaggtctttcgtctcggtccag 2734

                                                   
Query: 480  agccgccgagccacctgcagcttcctcttcttggagtcc 518
            || || ||||| |||||||| |||||| |||||||||||
Sbjct: 2733 aggcggcgagcgacctgcagtttcctcctcttggagtcc 2695
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  192 bits (97), Expect = 8e-46
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                            
Query: 303      aacgaggggatcccatatctccagccgttggaggagcgccg---ggtggggggctgctgc 359
                ||||| |||||||| |||||||||||||||||||| |||||   ||| ||  ||||||||
Sbjct: 25991363 aacgaagggatcccgtatctccagccgttggaggatcgccgccgggtcggctgctgctgc 25991422

                                                                            
Query: 360      ggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtagcccgatc 419
                ||||||||||||||||||||||||||| | || || || || |||||||| |||||||||
Sbjct: 25991423 ggcgcgaagctgagcccgaacatctccttgagaacttggcctggctcctggagcccgatc 25991482

                                                                            
Query: 420      agcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctccgtccac 479
                |||||||| |||||||||||||||||||| || |||||||||||  |  |||| ||||| 
Sbjct: 25991483 agcttggcgaccagggacgcgctctccctgacatgctccaggtctttcgtctcggtccag 25991542

                                                       
Query: 480      agccgccgagccacctgcagcttcctcttcttggagtcc 518
                || || ||||| |||||||| |||||| |||||||||||
Sbjct: 25991543 aggcggcgagcgacctgcagtttcctcctcttggagtcc 25991581



 Score =  192 bits (97), Expect = 8e-46
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                            
Query: 303      aacgaggggatcccatatctccagccgttggaggagcgccg---ggtggggggctgctgc 359
                ||||| |||||||| |||||||||||||||||||| |||||   ||| ||  ||||||||
Sbjct: 25941196 aacgaagggatcccgtatctccagccgttggaggatcgccgccgggtcggctgctgctgc 25941255

                                                                            
Query: 360      ggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtagcccgatc 419
                ||||||||||||||||||||||||||| | || || || || |||||||| |||||||||
Sbjct: 25941256 ggcgcgaagctgagcccgaacatctccttgagaacttggcctggctcctggagcccgatc 25941315

                                                                            
Query: 420      agcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctccgtccac 479
                |||||||| |||||||||||||||||||| || |||||||||||  |  |||| ||||| 
Sbjct: 25941316 agcttggcgaccagggacgcgctctccctgacatgctccaggtctttcgtctcggtccag 25941375

                                                       
Query: 480      agccgccgagccacctgcagcttcctcttcttggagtcc 518
                || || ||||| |||||||| |||||| |||||||||||
Sbjct: 25941376 aggcggcgagcgacctgcagtttcctcctcttggagtcc 25941414
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>dbj|AP005291.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1282_H11
          Length = 143314

 Score =  192 bits (97), Expect = 8e-46
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                          
Query: 303    aacgaggggatcccatatctccagccgttggaggagcgccg---ggtggggggctgctgc 359
              ||||| |||||||| |||||||||||||||||||| |||||   ||| ||  ||||||||
Sbjct: 142704 aacgaagggatcccgtatctccagccgttggaggatcgccgccgggtcggctgctgctgc 142763

                                                                          
Query: 360    ggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtagcccgatc 419
              ||||||||||||||||||||||||||| | || || || || |||||||| |||||||||
Sbjct: 142764 ggcgcgaagctgagcccgaacatctccttgagaacttggcctggctcctggagcccgatc 142823

                                                                          
Query: 420    agcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctccgtccac 479
              |||||||| |||||||||||||||||||| || |||||||||||  |  |||| ||||| 
Sbjct: 142824 agcttggcgaccagggacgcgctctccctgacatgctccaggtctttcgtctcggtccag 142883

                                                     
Query: 480    agccgccgagccacctgcagcttcctcttcttggagtcc 518
              || || ||||| |||||||| |||||| |||||||||||
Sbjct: 142884 aggcggcgagcgacctgcagtttcctcctcttggagtcc 142922



 Score =  192 bits (97), Expect = 8e-46
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                         
Query: 303   aacgaggggatcccatatctccagccgttggaggagcgccg---ggtggggggctgctgc 359
             ||||| |||||||| |||||||||||||||||||| |||||   ||| ||  ||||||||
Sbjct: 92537 aacgaagggatcccgtatctccagccgttggaggatcgccgccgggtcggctgctgctgc 92596

                                                                         
Query: 360   ggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtagcccgatc 419
             ||||||||||||||||||||||||||| | || || || || |||||||| |||||||||
Sbjct: 92597 ggcgcgaagctgagcccgaacatctccttgagaacttggcctggctcctggagcccgatc 92656

                                                                         
Query: 420   agcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctccgtccac 479
             |||||||| |||||||||||||||||||| || |||||||||||  |  |||| ||||| 
Sbjct: 92657 agcttggcgaccagggacgcgctctccctgacatgctccaggtctttcgtctcggtccag 92716

                                                    
Query: 480   agccgccgagccacctgcagcttcctcttcttggagtcc 518
             || || ||||| |||||||| |||||| |||||||||||
Sbjct: 92717 aggcggcgagcgacctgcagtttcctcctcttggagtcc 92755
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>dbj|AP005306.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0030D07
          Length = 133321

 Score =  192 bits (97), Expect = 8e-46
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                         
Query: 303   aacgaggggatcccatatctccagccgttggaggagcgccg---ggtggggggctgctgc 359
             ||||| |||||||| |||||||||||||||||||| |||||   ||| ||  ||||||||
Sbjct: 55236 aacgaagggatcccgtatctccagccgttggaggatcgccgccgggtcggctgctgctgc 55295

                                                                         
Query: 360   ggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtagcccgatc 419
             ||||||||||||||||||||||||||| | || || || || |||||||| |||||||||
Sbjct: 55296 ggcgcgaagctgagcccgaacatctccttgagaacttggcctggctcctggagcccgatc 55355

                                                                         
Query: 420   agcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctccgtccac 479
             |||||||| |||||||||||||||||||| || |||||||||||  |  |||| ||||| 
Sbjct: 55356 agcttggcgaccagggacgcgctctccctgacatgctccaggtctttcgtctcggtccag 55415

                                                    
Query: 480   agccgccgagccacctgcagcttcctcttcttggagtcc 518
             || || ||||| |||||||| |||||| |||||||||||
Sbjct: 55416 aggcggcgagcgacctgcagtttcctcctcttggagtcc 55454



 Score =  192 bits (97), Expect = 8e-46
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Plus

                                                                        
Query: 303  aacgaggggatcccatatctccagccgttggaggagcgccg---ggtggggggctgctgc 359
            ||||| |||||||| |||||||||||||||||||| |||||   ||| ||  ||||||||
Sbjct: 5069 aacgaagggatcccgtatctccagccgttggaggatcgccgccgggtcggctgctgctgc 5128

                                                                        
Query: 360  ggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtagcccgatc 419
            ||||||||||||||||||||||||||| | || || || || |||||||| |||||||||
Sbjct: 5129 ggcgcgaagctgagcccgaacatctccttgagaacttggcctggctcctggagcccgatc 5188

                                                                        
Query: 420  agcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctccgtccac 479
            |||||||| |||||||||||||||||||| || |||||||||||  |  |||| ||||| 
Sbjct: 5189 agcttggcgaccagggacgcgctctccctgacatgctccaggtctttcgtctcggtccag 5248

                                                   
Query: 480  agccgccgagccacctgcagcttcctcttcttggagtcc 518
            || || ||||| |||||||| |||||| |||||||||||
Sbjct: 5249 aggcggcgagcgacctgcagtttcctcctcttggagtcc 5287
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>dbj|AK100979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023144I23, full
            insert sequence
          Length = 3297

 Score =  192 bits (97), Expect = 8e-46
 Identities = 189/219 (86%), Gaps = 3/219 (1%)
 Strand = Plus / Minus

                                                                        
Query: 303  aacgaggggatcccatatctccagccgttggaggagcgccg---ggtggggggctgctgc 359
            ||||| |||||||| |||||||||||||||||||| |||||   ||| ||  ||||||||
Sbjct: 2913 aacgaagggatcccgtatctccagccgttggaggatcgccgccgggtcggctgctgctgc 2854

                                                                        
Query: 360  ggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtagcccgatc 419
            ||||||||||||||||||||||||||| | || || || || |||||||| |||||||||
Sbjct: 2853 ggcgcgaagctgagcccgaacatctccttgagaacttggcctggctcctggagcccgatc 2794

                                                                        
Query: 420  agcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctccgtccac 479
            |||||||| |||||||||||||||||||| || |||||||||||  |  |||| ||||| 
Sbjct: 2793 agcttggcgaccagggacgcgctctccctgacatgctccaggtctttcgtctcggtccag 2734

                                                   
Query: 480  agccgccgagccacctgcagcttcctcttcttggagtcc 518
            || || ||||| |||||||| |||||| |||||||||||
Sbjct: 2733 aggcggcgagcgacctgcagtttcctcctcttggagtcc 2695
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>gb|AF272749.1|AF272749 Zea mays kinesin heavy chain (KIN1) mRNA, partial cds
          Length = 2565

 Score =  178 bits (90), Expect = 1e-41
 Identities = 190/222 (85%), Gaps = 6/222 (2%)
 Strand = Plus / Minus

                                                                        
Query: 303  aacgaggggatcccatatctccagccgttggaggagcgccgg-gtggggg-----gctgc 356
            ||||| |||||||| ||||||||||| |||||||| |||||| | |||||     |||||
Sbjct: 2294 aacgaagggatcccgtatctccagccattggaggatcgccggcgagggggcggctgctgc 2235

                                                                        
Query: 357  tgcggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtagcccg 416
            |||||||| ||||||||||||||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 2234 tgcggcgcaaagctgagcccgaacatctccctgaggacttgccctggctcctggagcccg 2175

                                                                        
Query: 417  atcagcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctccgtc 476
            ||||||||||| || ||||| ||||||||||| || || || ||||||  |  ||| |||
Sbjct: 2174 atcagcttggcgacaagggaggcgctctccctgacatgttctaggtcctcggcctcggtc 2115

                                                      
Query: 477  cacagccgccgagccacctgcagcttcctcttcttggagtcc 518
            || ||||| ||||| ||||| |||||||||||||||||||||
Sbjct: 2114 cagagccggcgagcgacctggagcttcctcttcttggagtcc 2073
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>gb|AF272759.1|AF272759 Zea mays kinesin heavy chain (KIN15) mRNA, partial cds
          Length = 2888

 Score =  165 bits (83), Expect = 2e-37
 Identities = 143/163 (87%)
 Strand = Plus / Minus

                                                                        
Query: 353  ctgctgcggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtag 412
            |||||||||||||||||| || || ||||||||||||||  ||| ||| |||||| | ||
Sbjct: 2642 ctgctgcggcgcgaagctcagaccaaacatctccctcagcgccttcccaggctccaggag 2583

                                                                        
Query: 413  cccgatcagcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctc 472
            |||||||||  ||||||| |||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 2582 cccgatcagtctggccacgagggacgcgctctccctcacatgctccaggtccctggtctc 2523

                                                       
Query: 473  cgtccacagccgccgagccacctgcagcttcctcttcttggag 515
            |||||| || |||||||| |||||||||  |||| ||||||||
Sbjct: 2522 cgtccaaaggcgccgagcgacctgcagccgcctcctcttggag 2480
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>gb|AY108256.1| Zea mays PCO127685 mRNA sequence
          Length = 1683

 Score =  165 bits (83), Expect = 2e-37
 Identities = 143/163 (87%)
 Strand = Plus / Minus

                                                                        
Query: 353  ctgctgcggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtag 412
            |||||||||||||||||| || || ||||||||||||||  ||| ||| |||||| | ||
Sbjct: 1437 ctgctgcggcgcgaagctcagaccaaacatctccctcagcgccttcccaggctccaggag 1378

                                                                        
Query: 413  cccgatcagcttggccaccagggacgcgctctccctcacgtgctccaggtccctgctctc 472
            |||||||||  ||||||| |||||||||||||||||||| ||||||||||||||| ||||
Sbjct: 1377 cccgatcagtctggccacgagggacgcgctctccctcacatgctccaggtccctggtctc 1318

                                                       
Query: 473  cgtccacagccgccgagccacctgcagcttcctcttcttggag 515
            |||||| || |||||||| |||||||||  |||| ||||||||
Sbjct: 1317 cgtccaaaggcgccgagcgacctgcagccgcctcctcttggag 1275
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>gb|AY107187.1| Zea mays PCO082735 mRNA sequence
          Length = 647

 Score =  143 bits (72), Expect = 7e-31
 Identities = 133/152 (87%), Gaps = 6/152 (3%)
 Strand = Plus / Plus

                                                                       
Query: 303 aacgaggggatcccatatctccagccgttggaggagcgccgg-gtggggg-----gctgc 356
           ||||| |||||||| ||||||||||| |||||||| |||||| | |||||     |||||
Sbjct: 327 aacgaagggatcccgtatctccagccattggaggatcgccggcgagggggcggctgctgc 386

                                                                       
Query: 357 tgcggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtagcccg 416
           |||||||| ||||||||||||||||||||||| ||||| ||||| |||||||| ||||||
Sbjct: 387 tgcggcgcaaagctgagcccgaacatctccctgaggacttgccctggctcctggagcccg 446

                                           
Query: 417 atcagcttggccaccagggacgcgctctccct 448
           ||||||||||| || ||||| |||||||||||
Sbjct: 447 atcagcttggcgacaagggaagcgctctccct 478
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>ref|XM_473345.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2748

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 90/111 (81%)
 Strand = Plus / Minus

                                                                        
Query: 353  ctgctgcggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtag 412
            |||||||||||| || || | ||| |||||||| |||||| ||| ||| |||||  | ||
Sbjct: 2694 ctgctgcggcgcaaaacttaacccaaacatctctctcagggccttccctggctcaaggag 2635

                                                               
Query: 413  cccgatcagcttggccaccagggacgcgctctccctcacgtgctccaggtc 463
             ||||||||  |||| || ||||| || |||||||| || |||||||||||
Sbjct: 2634 tccgatcagtctggcaacaagggatgcactctccctgacatgctccaggtc 2584
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>emb|AL606459.5|OSJN00020 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0091D06,
              complete sequence
          Length = 174570

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                          
Query: 353    ctgctgcggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtag 412
              |||||||||||| || || | ||| |||||||| |||||| ||| ||| |||||  | ||
Sbjct: 157237 ctgctgcggcgcaaaacttaacccaaacatctctctcagggccttccctggctcaaggag 157296

                                                                 
Query: 413    cccgatcagcttggccaccagggacgcgctctccctcacgtgctccaggtc 463
               ||||||||  |||| || ||||| || |||||||| || |||||||||||
Sbjct: 157297 tccgatcagtctggcaacaagggatgcactctccctgacatgctccaggtc 157347
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>emb|AL606587.3|OSJN00022 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0011L07,
            complete sequence
          Length = 143585

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                        
Query: 353  ctgctgcggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtag 412
            |||||||||||| || || | ||| |||||||| |||||| ||| ||| |||||  | ||
Sbjct: 3877 ctgctgcggcgcaaaacttaacccaaacatctctctcagggccttccctggctcaaggag 3936

                                                               
Query: 413  cccgatcagcttggccaccagggacgcgctctccctcacgtgctccaggtc 463
             ||||||||  |||| || ||||| || |||||||| || |||||||||||
Sbjct: 3937 tccgatcagtctggcaacaagggatgcactctccctgacatgctccaggtc 3987
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 90/111 (81%)
 Strand = Plus / Plus

                                                                            
Query: 353      ctgctgcggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtag 412
                |||||||||||| || || | ||| |||||||| |||||| ||| ||| |||||  | ||
Sbjct: 26936177 ctgctgcggcgcaaaacttaacccaaacatctctctcagggccttccctggctcaaggag 26936236

                                                                   
Query: 413      cccgatcagcttggccaccagggacgcgctctccctcacgtgctccaggtc 463
                 ||||||||  |||| || ||||| || |||||||| || |||||||||||
Sbjct: 26936237 tccgatcagtctggcaacaagggatgcactctccctgacatgctccaggtc 26936287
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>dbj|AK102262.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033088K23, full
            insert sequence
          Length = 3375

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 90/111 (81%)
 Strand = Plus / Minus

                                                                        
Query: 353  ctgctgcggcgcgaagctgagcccgaacatctccctcaggacctgcccgggctcctgtag 412
            |||||||||||| || || | ||| |||||||| |||||| ||| ||| |||||  | ||
Sbjct: 3066 ctgctgcggcgcaaaacttaacccaaacatctctctcagggccttccctggctcaaggag 3007

                                                               
Query: 413  cccgatcagcttggccaccagggacgcgctctccctcacgtgctccaggtc 463
             ||||||||  |||| || ||||| || |||||||| || |||||||||||
Sbjct: 3006 tccgatcagtctggcaacaagggatgcactctccctgacatgctccaggtc 2956
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>ref|NM_183466.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1093

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 461 gtccctgctctccgtccacagc 482
           ||||||||||||||||||||||
Sbjct: 645 gtccctgctctccgtccacagc 624
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
              complete sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 461    gtccctgctctccgtccacagc 482
              ||||||||||||||||||||||
Sbjct: 227622 gtccctgctctccgtccacagc 227601
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>gb|DQ022951.1| Triticum aestivum stress responsive protein mRNA, complete cds
          Length = 846

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 461 gtccctgctctccgtccacagc 482
           ||||||||||||||||||||||
Sbjct: 442 gtccctgctctccgtccacagc 421
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>dbj|AP002818.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0436E04
          Length = 144644

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 461   gtccctgctctccgtccacagc 482
             ||||||||||||||||||||||
Sbjct: 69292 gtccctgctctccgtccacagc 69271
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>dbj|AK104820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-A11, full
           insert sequence
          Length = 1093

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 461 gtccctgctctccgtccacagc 482
           ||||||||||||||||||||||
Sbjct: 645 gtccctgctctccgtccacagc 624
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>dbj|AK104555.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-F10, full
           insert sequence
          Length = 1088

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 461 gtccctgctctccgtccacagc 482
           ||||||||||||||||||||||
Sbjct: 642 gtccctgctctccgtccacagc 621
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>dbj|AK071375.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095C18, full
           insert sequence
          Length = 1392

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 461 gtccctgctctccgtccacagc 482
           ||||||||||||||||||||||
Sbjct: 928 gtccctgctctccgtccacagc 907
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>dbj|AK060132.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C04, full
           insert sequence
          Length = 1220

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 461 gtccctgctctccgtccacagc 482
           ||||||||||||||||||||||
Sbjct: 685 gtccctgctctccgtccacagc 664
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>gb|AC011992.3| Homo sapiens BAC clone CTD-2327A23 from 7, complete sequence
          Length = 80515

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 406   cctgtagcccgatcagcttggccac 430
             |||||||||| ||||||||||||||
Sbjct: 31522 cctgtagcccaatcagcttggccac 31546
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>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 88      gaaaccgcgcaccaaaccggg 108
               |||||||||||||||||||||
Sbjct: 4382818 gaaaccgcgcaccaaaccggg 4382838
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>emb|BX548028.5| Zebrafish DNA sequence from clone CH211-260H24 in linkage group 12,
             complete sequence
          Length = 157392

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 280   caaccaaccaatttaatcaaccaaa 304
             ||||||||||| |||||||||||||
Sbjct: 21260 caaccaaccaaattaatcaaccaaa 21284
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 88      gaaaccgcgcaccaaaccggg 108
               |||||||||||||||||||||
Sbjct: 4495923 gaaaccgcgcaccaaaccggg 4495943
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>gb|AC121359.8| Mus musculus chromosome 15, clone RP23-138I21, complete sequence
          Length = 194871

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 343  gggtggggggctgctgcggcg 363
            |||||||||||||||||||||
Sbjct: 9908 gggtggggggctgctgcggcg 9928
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>gb|AC119264.8| Mus musculus chromosome 15, clone RP24-289J12, complete sequence
          Length = 163578

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 343   gggtggggggctgctgcggcg 363
             |||||||||||||||||||||
Sbjct: 88471 gggtggggggctgctgcggcg 88491
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>ref|XM_631998.1| Dictyostelium discoideum ABC transporter C family protein
            (DDB0216251), partial mRNA
          Length = 4239

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 279  tcaaccaaccaatttaatcaacca 302
            |||||||||||||||||| |||||
Sbjct: 3887 tcaaccaaccaatttaataaacca 3864
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 226     tggtcagccgcatcatcctg 245
               ||||||||||||||||||||
Sbjct: 2369338 tggtcagccgcatcatcctg 2369357
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>gb|AC126253.3| Mus musculus BAC clone RP24-119M15 from chromosome 14, complete
             sequence
          Length = 172035

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 306   gaggggatcccatatctcca 325
             ||||||||||||||||||||
Sbjct: 76496 gaggggatcccatatctcca 76477
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>emb|AL117350.12|HSJ803J11 Human DNA sequence from clone RP4-803J11 on chromosome 1 Contains the
             3' end of the RAB4A gene for RAB4A, member RAS oncogene
             family, a  novel gene, a novel gene (LOC126731) and a CpG
             island, complete sequence
          Length = 106441

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 492   acctgcagcttcctcttctt 511
             ||||||||||||||||||||
Sbjct: 20224 acctgcagcttcctcttctt 20205
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>emb|AL078611.1|HSB5E3 Human DNA sequence from clone SC22CB-5E3 on chromosome 22 Contains the
             3' end of the PKDREJ gene for polycystic kidney disease
             (polycystin) and REJ (sperm receptor for egg jelly, sea
             urchin homolog)-like, the 3' end of the PPARA gene for
             peroxisome proliferator activated receptor, a novel gene,
             ESTs, STSs, GSSs and a putative CpG island, complete
             sequence
          Length = 40981

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   caggcaacaccccaagacat 194
             ||||||||||||||||||||
Sbjct: 31966 caggcaacaccccaagacat 31985
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>ref|XM_969503.1| PREDICTED: Tribolium castaneum similar to CG6927-PA (LOC663460),
           mRNA
          Length = 1554

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 123 gatcaaacccccaacgcatg 142
           ||||||||||||||||||||
Sbjct: 261 gatcaaacccccaacgcatg 280
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>gb|AC148649.14| Gasterosteus aculeatus clone uogacrs-1f3-1, complete sequence
          Length = 34197

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 371  gagcccgaacatctccctca 390
            ||||||||||||||||||||
Sbjct: 8556 gagcccgaacatctccctca 8537
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>gb|AF474335.1| Dictyostelium discoideum ABC transporter ABCC.3 (abcC3) gene,
            complete cds
          Length = 6007

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 279  tcaaccaaccaatttaatcaacca 302
            |||||||||||||||||| |||||
Sbjct: 4758 tcaaccaaccaatttaataaacca 4735
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 365      gaagctgagcccgaacatctccct 388
                |||||| |||||||||||||||||
Sbjct: 20357533 gaagctcagcccgaacatctccct 20357510
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>gb|AY206718.1| Homo sapiens peroxisome proliferative activated receptor, alpha (PPARA)
             gene, complete cds
          Length = 86215

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   caggcaacaccccaagacat 194
             ||||||||||||||||||||
Sbjct: 76291 caggcaacaccccaagacat 76272
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>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1439_F07
          Length = 153743

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 365    gaagctgagcccgaacatctccct 388
              |||||| |||||||||||||||||
Sbjct: 136660 gaagctcagcccgaacatctccct 136637
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>dbj|AK100918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023133F16, full
            insert sequence
          Length = 2959

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 365  gaagctgagcccgaacatctccct 388
            |||||| |||||||||||||||||
Sbjct: 2739 gaagctcagcccgaacatctccct 2716
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>dbj|AK072633.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134L05, full
            insert sequence
          Length = 2868

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 365  gaagctgagcccgaacatctccct 388
            |||||| |||||||||||||||||
Sbjct: 2636 gaagctcagcccgaacatctccct 2613
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>emb|CR391908.15| Zebrafish DNA sequence from clone DKEY-225E11 in linkage group 19,
              complete sequence
          Length = 171679

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 280    caaccaaccaatttaatcaaccaa 303
              ||||||||||||| ||||||||||
Sbjct: 168503 caaccaaccaattaaatcaaccaa 168526
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>dbj|AK060588.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-B11, full
            insert sequence
          Length = 1545

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 365  gaagctgagcccgaacatctccct 388
            |||||| |||||||||||||||||
Sbjct: 1288 gaagctcagcccgaacatctccct 1265


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,704,288
Number of Sequences: 3902068
Number of extensions: 3704288
Number of successful extensions: 71136
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70927
Number of HSP's gapped (non-prelim): 200
length of query: 518
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 495
effective length of database: 17,143,297,704
effective search space: 8485932363480
effective search space used: 8485932363480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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