ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32e07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42... 31 1.1
2OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42... 29 4.2
3OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42... 29 4.2
4OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42... 28 5.5
5OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (... 28 7.2

>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (LeOPR3)
          Length = 396

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -1

Query: 109 PVVGYTDYPFLPG 71
           PVVGYTDYPFL G
Sbjct: 374 PVVGYTDYPFLQG 386



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>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase
           1) (AtOPR1) (FS-AT-I)
          Length = 372

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 109 PVVGYTDYPFL 77
           PVVGYTDYPFL
Sbjct: 358 PVVGYTDYPFL 368



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>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase
           3) (Delayed dehiscence 1) (AtOPR3)
          Length = 391

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = -1

Query: 109 PVVGYTDYPFL 77
           PVVGYTDYPFL
Sbjct: 375 PVVGYTDYPFL 385



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>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)|
           (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase
           1) (LeOPR1)
          Length = 376

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 10/11 (90%), Positives = 11/11 (100%)
 Frame = -1

Query: 109 PVVGYTDYPFL 77
           P+VGYTDYPFL
Sbjct: 362 PIVGYTDYPFL 372



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>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)|
           (LeOPR2)
          Length = 355

 Score = 28.1 bits (61), Expect = 7.2
 Identities = 9/11 (81%), Positives = 11/11 (100%)
 Frame = -1

Query: 109 PVVGYTDYPFL 77
           P++GYTDYPFL
Sbjct: 341 PIIGYTDYPFL 351


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,109,101
Number of Sequences: 219361
Number of extensions: 194949
Number of successful extensions: 431
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 430
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 80,573,946
effective HSP length: 11
effective length of database: 78,160,975
effective search space used: 1875863400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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