ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32e06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SAPK3_ORYSA (Q75V63) Serine/threonine-protein kinase SAPK3 (EC 2... 55 8e-08
2SAPK6_ORYSA (Q6ZI44) Serine/threonine-protein kinase SAPK6 (EC 2... 36 0.037
3ASK1_ARATH (P43291) Serine/threonine-protein kinase ASK1 (EC 2.7... 33 0.24
4SAPK5_ORYSA (Q7XKA8) Serine/threonine-protein kinase SAPK5 (EC 2... 32 0.53
5SAPK2_ORYSA (Q84TC6) Serine/threonine-protein kinase SAPK2 (EC 2... 32 0.70
6SAPK1_ORYSA (Q75LR7) Serine/threonine-protein kinase SAPK1 (EC 2... 31 1.6
7GREA_MYCGE (P47524) Transcription elongation factor greA (Transc... 30 2.7
8EFTS_FRATT (Q5NHX9) Elongation factor Ts (EF-Ts) 30 3.5

>SAPK3_ORYSA (Q75V63) Serine/threonine-protein kinase SAPK3 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           3) (Protein kinase REK)
          Length = 334

 Score = 55.1 bits (131), Expect = 8e-08
 Identities = 28/48 (58%), Positives = 37/48 (77%)
 Frame = -2

Query: 444 SLPKEIAERDRANFKEPEKATETAASAAQPVEEIMRIIQEAKAPGDMS 301
           +LPKEI+ER++A++K+ + A  T     Q VEEIMRIIQEAK PGDM+
Sbjct: 264 NLPKEISEREKADYKDTDAAPPT-----QAVEEIMRIIQEAKVPGDMA 306



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>SAPK6_ORYSA (Q6ZI44) Serine/threonine-protein kinase SAPK6 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           6)
          Length = 365

 Score = 36.2 bits (82), Expect = 0.037
 Identities = 17/44 (38%), Positives = 29/44 (65%)
 Frame = -2

Query: 444 SLPKEIAERDRANFKEPEKATETAASAAQPVEEIMRIIQEAKAP 313
           +LP+E+ E  +A + + + +  T +   Q V+EIM+I+QEAK P
Sbjct: 263 NLPRELTEAAQAKYYKKDNSARTFSD--QTVDEIMKIVQEAKTP 304



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>ASK1_ARATH (P43291) Serine/threonine-protein kinase ASK1 (EC 2.7.11.1)|
          Length = 363

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 18/49 (36%), Positives = 30/49 (61%)
 Frame = -2

Query: 444 SLPKEIAERDRANFKEPEKATETAASAAQPVEEIMRIIQEAKAPGDMSK 298
           +LP+E+ E  +A + + E  T     + Q VEEIM+I+ +AK P  +S+
Sbjct: 263 NLPRELTETAQAAYFKKENPT----FSLQTVEEIMKIVADAKTPPPVSR 307



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>SAPK5_ORYSA (Q7XKA8) Serine/threonine-protein kinase SAPK5 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           5)
          Length = 370

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 10/52 (19%)
 Frame = -2

Query: 444 SLPKEIAERDRA---NFKEPEKATETAASAA-------QPVEEIMRIIQEAK 319
           +LP+E+ E  +A   N +  + A  +A+SAA       Q VE+IMRI+QEA+
Sbjct: 263 NLPRELKEEAQAVYYNRRGADHAASSASSAAAAAAFSPQSVEDIMRIVQEAQ 314



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>SAPK2_ORYSA (Q84TC6) Serine/threonine-protein kinase SAPK2 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           2)
          Length = 339

 Score = 32.0 bits (71), Expect = 0.70
 Identities = 15/22 (68%), Positives = 18/22 (81%)
 Frame = -2

Query: 363 AQPVEEIMRIIQEAKAPGDMSK 298
           +Q +EEIM IIQEA+ PGD SK
Sbjct: 285 SQGLEEIMAIIQEARKPGDGSK 306



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>SAPK1_ORYSA (Q75LR7) Serine/threonine-protein kinase SAPK1 (EC 2.7.11.1)|
           (Osmotic stress/abscisic acid-activated protein kinase
           1)
          Length = 342

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 13/22 (59%), Positives = 17/22 (77%)
 Frame = -2

Query: 363 AQPVEEIMRIIQEAKAPGDMSK 298
           +Q +EE+M IIQEA+ PGD  K
Sbjct: 285 SQSLEEVMAIIQEARKPGDAMK 306



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>GREA_MYCGE (P47524) Transcription elongation factor greA (Transcript cleavage|
           factor greA)
          Length = 161

 Score = 30.0 bits (66), Expect = 2.7
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 405 FKEPEKATETAASAAQPVEEIMRIIQEAKAPGDMSK 298
           FK+ EK  E      +P  EI+R++QEA+  GD+S+
Sbjct: 13  FKQLEKELENLIQVKRP--EIIRLLQEARDQGDLSE 46



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>EFTS_FRATT (Q5NHX9) Elongation factor Ts (EF-Ts)|
          Length = 289

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 19/48 (39%), Positives = 24/48 (50%)
 Frame = -2

Query: 441 LPKEIAERDRANFKEPEKATETAASAAQPVEEIMRIIQEAKAPGDMSK 298
           L KE+ ER  A   E +KA   AA   +   E MRI  +AKA    S+
Sbjct: 8   LVKELRERTGAGMMECKKALVAAAGDIEKAAEEMRISGQAKADKKASR 55


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,793,860
Number of Sequences: 219361
Number of extensions: 714042
Number of successful extensions: 1821
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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