ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190249.1| Oryza sativa (japonica cultivar-group), predic... 101 2e-18
2gb|AF429948.1| Oryza sativa putative fructokinase I mRNA, comple... 101 2e-18
3dbj|AK120887.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
4dbj|AK060500.1| Oryza sativa (japonica cultivar-group) cDNA clon... 101 2e-18
5dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
6dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
7dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
8gb|AY104222.1| Zea mays PCO070293 mRNA sequence 58 3e-05
9gb|DQ235199.1| Solanum tuberosum clone 171E03 fructokinase-like ... 42 1.8
10gb|DQ235181.1| Solanum tuberosum clone 163C10 fructokinase-like ... 42 1.8
11gb|AF530592.1| Petunia integrifolia subsp. inflata putative fruc... 42 1.8
12gb|AC112030.4| Rattus norvegicus 4 BAC CH230-100K8 (Children's H... 42 1.8
13gb|AC006376.2|AC006376 Homo sapiens BAC clone RP11-386L3 from Y,... 42 1.8
14gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, com... 40 7.0
15gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, co... 40 7.0
16gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Ho... 40 7.0
17emb|AL732372.15| Human DNA sequence from clone RP4-669L17 on chr... 40 7.0
18emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chr... 40 7.0
19emb|AL662889.5| Human DNA sequence from clone RP11-370K11 on chr... 40 7.0
20emb|AL672310.3| Human DNA sequence from clone RP11-226I21 on chr... 40 7.0
21emb|AL390765.17| Human DNA sequence from clone RP11-509I1 on chr... 40 7.0
22gb|AC092670.2| Homo sapiens BAC clone RP11-586D5 from 4, complet... 40 7.0
23gb|AC009334.8| Homo sapiens chromosome 1, clone RP11-45L2, compl... 40 7.0
24dbj|AK032510.1| Mus musculus adult male olfactory brain cDNA, RI... 40 7.0
25dbj|AK043710.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 40 7.0
26dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
27dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
28dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
29gb|AC012005.4|AC012005 Homo sapiens clone RP11-533E23, complete ... 40 7.0
30gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, com... 40 7.0
31gb|AC006328.5|AC006328 Homo sapiens BAC clone RP11-102O5 from Y,... 40 7.0
32ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P... 40 7.0
33gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, comp... 40 7.0
34gb|AF281920.1|AF281920 Homo sapiens clone 16qtel_c53bt7 sequence 40 7.0
35gb|AC138033.1| Homo sapiens chromosome 5 clone XXcos-B22C66, com... 40 7.0
36gb|AC137934.1| Homo sapiens chromosome 16 clone XXcos-yA11c16, c... 40 7.0
37gb|AC114498.2| Homo sapiens chromosome 1 clone RP5-857K21, compl... 40 7.0
38gb|AC130223.2| Homo sapiens cosmid clone XXcos-2003C17 from 2, c... 40 7.0
39gb|AC134873.2| Homo sapiens cosmid clone XXcos-2003C15 from 2, c... 40 7.0
40dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
41dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
42emb|BX649379.10| Human DNA sequence from clone RP5-1040D10 on ch... 40 7.0
43dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
44dbj|AP005754.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
45dbj|AP005933.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
46emb|AJ487038.1|CAR487038 Cicer arietinum partial mRNA for fructo... 40 7.0
47dbj|AP006222.1| Homo sapiens genomic DNA, chromosome Un, clone:C... 40 7.0
48gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.0
49emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.0
50emb|AL844530.7| Mouse DNA sequence from clone RP23-248L2 on chro... 40 7.0
51emb|AL136038.5|CNS01DVT Human chromosome 14 DNA sequence BAC C-2... 40 7.0 
>ref|NM_190249.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 972

 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Minus

                                                                       
Query: 397 tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 456
           |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 934 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 875

                                                                      
Query: 457 atttgatcaccgcctcaagctttttcttgtcttgcaatgccgatggatcttggacaatt 515
           |||| ||| |  |||||||||| ||||  |||||||| |  |||||||| |||||||||
Sbjct: 874 atttaatcgcttcctcaagcttcttctgatcttgcaacgatgatggatcctggacaatt 816
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>gb|AF429948.1| Oryza sativa putative fructokinase I mRNA, complete cds
          Length = 1135

 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Minus

                                                                       
Query: 397 tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 456
           |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 995 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 936

                                                                      
Query: 457 atttgatcaccgcctcaagctttttcttgtcttgcaatgccgatggatcttggacaatt 515
           |||| ||| |  |||||||||| ||||  |||||||| |  |||||||| |||||||||
Sbjct: 935 atttaatcgcttcctcaagcttcttctgatcttgcaacgatgatggatcctggacaatt 877



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 289  tgctcctgatccagaacagcgtacaatacaatttgc 324
            ||||||||||||||| |||| |||||||||||||||
Sbjct: 1107 tgctcctgatccagatcagcatacaatacaatttgc 1072
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>dbj|AK120887.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029D05, full
           insert sequence
          Length = 1216

 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Minus

                                                                       
Query: 397 tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 456
           |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 800 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 741

                                                                      
Query: 457 atttgatcaccgcctcaagctttttcttgtcttgcaatgccgatggatcttggacaatt 515
           |||| ||| |  |||||||||| ||||  |||||||| |  |||||||| |||||||||
Sbjct: 740 atttaatcgcttcctcaagcttcttctgatcttgcaacgatgatggatcctggacaatt 682



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                               
Query: 289 tgctcctgatccagaacagcgtacaatacaatttgc 324
           ||||||||||||||| |||| |||||||||||||||
Sbjct: 912 tgctcctgatccagatcagcatacaatacaatttgc 877
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>dbj|AK060500.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-017-F08, full
            insert sequence
          Length = 1380

 Score =  101 bits (51), Expect = 2e-18
 Identities = 102/119 (85%)
 Strand = Plus / Minus

                                                                        
Query: 397  tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 456
            |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 1156 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 1097

                                                                       
Query: 457  atttgatcaccgcctcaagctttttcttgtcttgcaatgccgatggatcttggacaatt 515
            |||| ||| |  |||||||||| ||||  |||||||| |  |||||||| |||||||||
Sbjct: 1096 atttaatcgcttcctcaagcttcttctgatcttgcaacgatgatggatcctggacaatt 1038



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 289  tgctcctgatccagaacagcgtacaatacaatttgc 324
            ||||||||||||||| |||| |||||||||||||||
Sbjct: 1268 tgctcctgatccagatcagcatacaatacaatttgc 1233
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                            
Query: 397      tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 456
                |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 38878635 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 38878694

                                           
Query: 457      atttgatcaccgcctcaagctttttct 483
                |||| ||| |  |||||||||| ||||
Sbjct: 38878695 atttaatcgcttcctcaagcttcttct 38878721



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                    
Query: 289      tgctcctgatccagaacagcgtacaatacaatttgc 324
                ||||||||||||||| |||| |||||||||||||||
Sbjct: 38878523 tgctcctgatccagatcagcatacaatacaatttgc 38878558
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>dbj|AP003407.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1078G07
          Length = 199457

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                          
Query: 397    tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 456
              |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 151517 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 151576

                                         
Query: 457    atttgatcaccgcctcaagctttttct 483
              |||| ||| |  |||||||||| ||||
Sbjct: 151577 atttaatcgcttcctcaagcttcttct 151603



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                  
Query: 289    tgctcctgatccagaacagcgtacaatacaatttgc 324
              ||||||||||||||| |||| |||||||||||||||
Sbjct: 151405 tgctcctgatccagatcagcatacaatacaatttgc 151440
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>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0696G06
          Length = 142571

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                         
Query: 397   tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccacatgcgttggcaa 456
             |||||| ||| ||||||||||||||||| ||||||||||||||||| || || |||||||
Sbjct: 43421 tgggcagtgatgggattgcccctttctttgtggcggtgattgctccgcacgcattggcaa 43480

                                        
Query: 457   atttgatcaccgcctcaagctttttct 483
             |||| ||| |  |||||||||| ||||
Sbjct: 43481 atttaatcgcttcctcaagcttcttct 43507



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                                 
Query: 289   tgctcctgatccagaacagcgtacaatacaatttgc 324
             ||||||||||||||| |||| |||||||||||||||
Sbjct: 43309 tgctcctgatccagatcagcatacaatacaatttgc 43344
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>gb|AY104222.1| Zea mays PCO070293 mRNA sequence
          Length = 1331

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                             
Query: 397  tgggcaatgaagggattgcccctttcttcgtggcggtgattgctccaca 445
            ||||||| || ||||| || || ||||||||||||||||||||||||||
Sbjct: 1040 tgggcaaagacgggatcgcacccttcttcgtggcggtgattgctccaca 992
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>gb|DQ235199.1| Solanum tuberosum clone 171E03 fructokinase-like mRNA, complete cds
          Length = 1245

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 408  gggattgcccctttcttcgtggcggtgattgctccacatgc 448
            |||||||| |||||||| ||||  ||||| |||||||||||
Sbjct: 1015 gggattgctcctttcttggtggttgtgatggctccacatgc 975
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>gb|DQ235181.1| Solanum tuberosum clone 163C10 fructokinase-like mRNA, complete cds
          Length = 1245

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 408  gggattgcccctttcttcgtggcggtgattgctccacatgc 448
            |||||||| |||||||| ||||  ||||| |||||||||||
Sbjct: 1015 gggattgctcctttcttggtggttgtgatggctccacatgc 975
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>gb|AF530592.1| Petunia integrifolia subsp. inflata putative fructokinase 2 (S1-3.16)
            gene, complete cds
          Length = 9183

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 408  gggattgcccctttcttcgtggcggtgattgctccacatgc 448
            |||||||| |||||||| ||||  ||||| |||||||||||
Sbjct: 7421 gggattgctcctttctttgtggttgtgatggctccacatgc 7381
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>gb|AC112030.4| Rattus norvegicus 4 BAC CH230-100K8 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237374

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 243    ggcaaaacaaaaaggcaagca 263
              |||||||||||||||||||||
Sbjct: 114060 ggcaaaacaaaaaggcaagca 114040
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>gb|AC006376.2|AC006376 Homo sapiens BAC clone RP11-386L3 from Y, complete sequence
          Length = 172007

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 43     ttgtcaaaaattgagaacata 63
              |||||||||||||||||||||
Sbjct: 161120 ttgtcaaaaattgagaacata 161100
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>gb|AC113599.10| Mus musculus chromosome 18, clone RP23-5D23, complete sequence
          Length = 217989

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 246    aaaacaaaaaggcaagcaggggta 269
              |||||||||||| |||||||||||
Sbjct: 168178 aaaacaaaaaggaaagcaggggta 168155
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>gb|AC113010.10| Mus musculus chromosome 18, clone RP23-172F6, complete sequence
          Length = 246921

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 246   aaaacaaaaaggcaagcaggggta 269
             |||||||||||| |||||||||||
Sbjct: 71215 aaaacaaaaaggaaagcaggggta 71192
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>gb|AC095563.7| Rattus norvegicus 9 BAC CH230-7G11 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 237247

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 244    gcaaaacaaaaaggcaagca 263
              ||||||||||||||||||||
Sbjct: 161972 gcaaaacaaaaaggcaagca 161991
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>emb|AL732372.15| Human DNA sequence from clone RP4-669L17 on chromosome 1 Contains five
             novel genes, two novel pseudogenes and the gene for a
             novel protein similar to the olfactory receptor family,
             complete sequence
          Length = 153649

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 96005 aatagggcaaaacaaaaagg 95986
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>emb|AL627309.15| Human DNA sequence from clone RP11-34P13 on chromosome 1 Contains a
             pseudogene similar to part of DEAD/H box polypeptide 11
             (CHL1-like helicase homolog, S. cerevisiae) (DDX11), two
             novel pseudogenes, nine novel genes, two novel proteins
             similar to the olfactory receptor family, a capicua
             homolog (Drosophila) (CIC) pseudogene and two CpG islands,
             complete sequence
          Length = 166904

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 84660 aatagggcaaaacaaaaagg 84679
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>emb|AL662889.5| Human DNA sequence from clone RP11-370K11 on chromosome 1 Contains a
             fatty acid binding protein, muscle and heart
             (mammary-derived growth inhibitor) pseudogene and part of
             the AKT3 gene for  v-akt murine thymoma viral oncogene
             homolog 3 (protein kinase B, gamma), complete sequence
          Length = 127036

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 39    ttccttgtcaaaaattgagaacat 62
             ||||||||||||||| ||||||||
Sbjct: 66581 ttccttgtcaaaaatggagaacat 66604
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>emb|AL672310.3| Human DNA sequence from clone RP11-226I21 on chromosome 6 Contains
             putative novel gene, complete sequence
          Length = 53890

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 41891 aatagggcaaaacaaaaagg 41872
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>emb|AL390765.17| Human DNA sequence from clone RP11-509I1 on chromosome 1 Contains the
            5' end of the GNG4 gene for guanine nucleotide binding (G
            protein) gamma 4 protein, the 3' end of the CHS1 gene for
            Chediak-Higashi syndrome 1 protein and a CpG island,
            complete sequence
          Length = 80101

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 410  gattgcccctttcttcgtgg 429
            ||||||||||||||||||||
Sbjct: 5517 gattgcccctttcttcgtgg 5498
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>gb|AC092670.2| Homo sapiens BAC clone RP11-586D5 from 4, complete sequence
          Length = 157951

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 238  aatagggcaaaacaaaaagg 257
            ||||||||||||||||||||
Sbjct: 4496 aatagggcaaaacaaaaagg 4477
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>gb|AC009334.8| Homo sapiens chromosome 1, clone RP11-45L2, complete sequence
          Length = 165618

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 410    gattgcccctttcttcgtgg 429
              ||||||||||||||||||||
Sbjct: 162542 gattgcccctttcttcgtgg 162561
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>dbj|AK032510.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
            enriched library, clone:6430575D21 product:hypothetical
            Microbodies C-terminal targeting signal/CUB domain/Low
            density lipoprotein (LDL)-receptor class A (LDLRA) domain
            containing protein, full insert sequence
          Length = 2399

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 246  aaaacaaaaaggcaagcaggggta 269
            |||||||||||| |||||||||||
Sbjct: 2097 aaaacaaaaaggaaagcaggggta 2074
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>dbj|AK043710.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830022O03 product:hypothetical
            Microbodies C-terminal targeting signal/LDL-receptor
            class A (LDLRA) domain profile/CUB domain/Low density
            lipoprotein (LDL)-receptor class A (LDLRA) domain/CUB
            domain profile containing protein, full insert sequence
          Length = 3803

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 246  aaaacaaaaaggcaagcaggggta 269
            |||||||||||| |||||||||||
Sbjct: 2566 aaaacaaaaaggaaagcaggggta 2543
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       aaaattgagaacataaacca 68
                ||||||||||||||||||||
Sbjct: 21790029 aaaattgagaacataaacca 21790010
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      aaaattgagaacataaacca 68
               ||||||||||||||||||||
Sbjct: 7099848 aaaattgagaacataaacca 7099867



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 49      aaaattgagaacataaacca 68
               ||||||||||||||||||||
Sbjct: 6802735 aaaattgagaacataaacca 6802754
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 361      acgccttctccatcagccgc 380
                ||||||||||||||||||||
Sbjct: 21091482 acgccttctccatcagccgc 21091501
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>gb|AC012005.4|AC012005 Homo sapiens clone RP11-533E23, complete sequence
          Length = 189557

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 238    aatagggcaaaacaaaaagg 257
              ||||||||||||||||||||
Sbjct: 126773 aatagggcaaaacaaaaagg 126754
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>gb|AC136309.9| Homo sapiens chromosome 11, clone RP11-242C5, complete sequence
          Length = 150642

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 28393 aatagggcaaaacaaaaagg 28412
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>gb|AC006328.5|AC006328 Homo sapiens BAC clone RP11-102O5 from Y, complete sequence
          Length = 177769

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 13803 aatagggcaaaacaaaaagg 13822
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>ref|NG_004755.1| Homo sapiens chromosome Y palindromes P1, P2, P3 and inverted repeat IR2
               (P1-P2-P3-IR2@) on chromosome Y
          Length = 4538292

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 238     aatagggcaaaacaaaaagg 257
               ||||||||||||||||||||
Sbjct: 3536154 aatagggcaaaacaaaaagg 3536173



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 238     aatagggcaaaacaaaaagg 257
               ||||||||||||||||||||
Sbjct: 2512224 aatagggcaaaacaaaaagg 2512205
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>gb|AC131281.7| Homo sapiens chromosome 8, clone RP11-585F1, complete sequence
          Length = 120139

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 97614 aatagggcaaaacaaaaagg 97595
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>gb|AF281920.1|AF281920 Homo sapiens clone 16qtel_c53bt7 sequence
          Length = 485

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 aatagggcaaaacaaaaagg 257
           ||||||||||||||||||||
Sbjct: 266 aatagggcaaaacaaaaagg 285
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>gb|AC138033.1| Homo sapiens chromosome 5 clone XXcos-B22C66, complete sequence
          Length = 38954

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 16751 aatagggcaaaacaaaaagg 16770
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>gb|AC137934.1| Homo sapiens chromosome 16 clone XXcos-yA11c16, complete sequence
          Length = 35141

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 18550 aatagggcaaaacaaaaagg 18531
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>gb|AC114498.2| Homo sapiens chromosome 1 clone RP5-857K21, complete sequence
          Length = 121664

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 55375 aatagggcaaaacaaaaagg 55394
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>gb|AC130223.2| Homo sapiens cosmid clone XXcos-2003C17 from 2, complete sequence
          Length = 16515

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 12598 aatagggcaaaacaaaaagg 12579
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>gb|AC134873.2| Homo sapiens cosmid clone XXcos-2003C15 from 2, complete sequence
          Length = 36966

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 238 aatagggcaaaacaaaaagg 257
           ||||||||||||||||||||
Sbjct: 898 aatagggcaaaacaaaaagg 917
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>dbj|AP005810.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0696F12
          Length = 165227

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 361   acgccttctccatcagccgc 380
             ||||||||||||||||||||
Sbjct: 12843 acgccttctccatcagccgc 12862
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>dbj|AP003863.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1058_A12
          Length = 152269

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 361    acgccttctccatcagccgc 380
              ||||||||||||||||||||
Sbjct: 134781 acgccttctccatcagccgc 134800
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>emb|BX649379.10| Human DNA sequence from clone RP5-1040D10 on chromosome 1, complete
             sequence
          Length = 93321

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 38056 aatagggcaaaacaaaaagg 38037
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>dbj|AP006857.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0002E10
          Length = 140486

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aaaattgagaacataaacca 68
             ||||||||||||||||||||
Sbjct: 53454 aaaattgagaacataaacca 53473
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>dbj|AP005754.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0089L03
          Length = 172106

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aaaattgagaacataaacca 68
              ||||||||||||||||||||
Sbjct: 155137 aaaattgagaacataaacca 155156
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>dbj|AP005933.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0674B07
          Length = 192191

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 49     aaaattgagaacataaacca 68
              ||||||||||||||||||||
Sbjct: 145334 aaaattgagaacataaacca 145353
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>emb|AJ487038.1|CAR487038 Cicer arietinum partial mRNA for fructokinase-like protein, clone
           CanPFKB
          Length = 972

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 435 attgctccacatgcgttggcaaatttga 462
           |||||||||||||| || ||||||||||
Sbjct: 642 attgctccacatgcatttgcaaatttga 615
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>dbj|AP006222.1| Homo sapiens genomic DNA, chromosome Un, clone:CMC-68E4, telomere
             region, complete sequence
          Length = 40302

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 238   aatagggcaaaacaaaaagg 257
             ||||||||||||||||||||
Sbjct: 14091 aatagggcaaaacaaaaagg 14110
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 49       aaaattgagaacataaacca 68
                ||||||||||||||||||||
Sbjct: 21718374 aaaattgagaacataaacca 21718355
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>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 186030

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 49    aaaattgagaacataaacca 68
             ||||||||||||||||||||
Sbjct: 22522 aaaattgagaacataaacca 22541
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>emb|AL844530.7| Mouse DNA sequence from clone RP23-248L2 on chromosome 2, complete
             sequence
          Length = 169779

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 244   gcaaaacaaaaaggcaagcagggg 267
             |||||||| |||||||||||||||
Sbjct: 77709 gcaaaacagaaaggcaagcagggg 77732
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>emb|AL136038.5|CNS01DVT Human chromosome 14 DNA sequence BAC C-2302E22 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 151930

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 236    gaaatagggcaaaacaaaaa 255
              ||||||||||||||||||||
Sbjct: 129342 gaaatagggcaaaacaaaaa 129323


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,532,066
Number of Sequences: 3902068
Number of extensions: 4532066
Number of successful extensions: 80062
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79876
Number of HSP's gapped (non-prelim): 186
length of query: 519
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 496
effective length of database: 17,143,297,704
effective search space: 8503075661184
effective search space used: 8503075661184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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