ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32d11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK063356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 6e-22
2dbj|AK111477.1| Oryza sativa (japonica cultivar-group) cDNA clon... 105 1e-19
3ref|NM_190067.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
5dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
6dbj|AK073591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
7ref|NM_190072.1| Oryza sativa (japonica cultivar-group), predic... 56 1e-04
8dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 1e-04
9ref|NM_190071.1| Oryza sativa (japonica cultivar-group), predic... 54 5e-04
10ref|NM_190069.1| Oryza sativa (japonica cultivar-group), predic... 50 0.007
11dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
12emb|AJ581532.1|SCE581532 Secale cereale xi-II/III gene for xylan... 46 0.12
13emb|AJ581531.1|SCE581531 Secale cereale partial xi-IV gene for x... 46 0.12
14emb|AJ581529.1|HVU581529 Hordeum vulgare xi gene for xylanase in... 46 0.12
15dbj|AB114626.1| Triticum aestivum taxi-I mRNA for xylanase inhib... 46 0.12
16emb|AJ438880.1|TAE438880 Triticum aestivum xiI gene for xylanase... 46 0.12
17gb|AE005121.1| Halobacterium sp. NRC-1 section 152 of 170 of the... 44 0.45
18ref|XM_472749.1| Oryza sativa (japonica cultivar-group), predic... 42 1.8
19gb|BT018606.1| Zea mays clone EL01N0450E05.d mRNA sequence 42 1.8
20gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 42 1.8
21gb|AC163894.2| Glomus intraradices clone JGIATSX-9F17, complete ... 42 1.8
22gb|AC141640.3| Mus musculus BAC clone RP23-319E4 from chromosome... 42 1.8
23emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 42 1.8
24emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4,... 42 1.8
25gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 42 1.8
26gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 42 1.8
27dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
28dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.8
29dbj|AK108003.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.8
30gb|AY104865.1| Zea mays PCO099871 mRNA sequence 42 1.8
31gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 42 1.8
32gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.8
33emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa... 42 1.8
34gb|AC122846.4| Mus musculus BAC clone RP23-156M18 from 19, compl... 42 1.8
35gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 7.1
36ref|XM_629011.1| Dictyostelium discoideum hypothetical protein (... 40 7.1
37ref|XM_629010.1| Dictyostelium discoideum hypothetical protein (... 40 7.1
38gb|DQ219479.1| wheat putative xylanase inhibitor mRNA, partial cds 40 7.1
39ref|NM_190029.1| Oryza sativa (japonica cultivar-group), predic... 40 7.1
40gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 7.1
41ref|XM_369372.1| Magnaporthe grisea 70-15 chromosome III hypothe... 40 7.1
42gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 7.1
43gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 7.1
44ref|XM_755410.1| Ustilago maydis 521 hypothetical protein (UM043... 40 7.1
45ref|XM_726409.1| Aspergillus fumigatus Af293 hypothetical protei... 40 7.1
46ref|XM_446000.1| Candida glabrata CBS138, CAGL0F00605g partial mRNA 40 7.1
47gb|AC110237.8| Mus musculus chromosome 5, clone RP23-104B24, com... 40 7.1
48emb|AL356113.8| Human DNA sequence from clone RP11-429A24 on chr... 40 7.1
49ref|XM_968893.1| PREDICTED: Tribolium castaneum similar to CG136... 40 7.1
50emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 7.1
51emb|CR380952.1| Candida glabrata strain CBS138 chromosome F comp... 40 7.1
52emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS finger... 40 7.1
53emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.1
54emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 7.1
55emb|AJ581530.1|SCE581530 Secale cereale partial xi-I gene for xy... 40 7.1
56gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell... 40 7.1
57ref|NM_132328.1| Drosophila melanogaster CG17446-RA (CG17446), mRNA 40 7.1
58dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
59dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
60ref|XM_394491.2| PREDICTED: Apis mellifera similar to GA13060-PA... 40 7.1
61emb|BX831091.1|CNS0A0PM Arabidopsis thaliana Full-length cDNA Co... 40 7.1
62dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 40 7.1
63dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
64dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
65dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
66dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.1
67gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 ... 40 7.1
68gb|AC115725.9| Mus musculus chromosome 5, clone RP23-21A18, comp... 40 7.1
69emb|Y11398.1|LDY11398 L.donovani kinetoplast minicircle DNA, 819 bp 40 7.1 
>dbj|AK063356.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C06, full
            insert sequence
          Length = 1372

 Score =  113 bits (57), Expect = 6e-22
 Identities = 132/157 (84%)
 Strand = Plus / Minus

                                                                        
Query: 300  catctggacgaacgcgaagcacacggtctggttgttcacctgcacgagcgagctggcgcc 359
            ||||| || ||||||||||||||| ||||| | || ||||||||| ||||||||| ||||
Sbjct: 1151 catctcgaggaacgcgaagcacaccgtctgttcgtccacctgcaccagcgagctgccgcc 1092

                                                                        
Query: 360  gggcagcgtccagttccggccaccgtccagcatcagctcgatgttggccacgccgtagcc 419
            ||| ||||||||||||||||| ||| |||||| ||| |||||||| |||||| || ||||
Sbjct: 1091 ggggagcgtccagttccggccgccgcccagcaccaggtcgatgttcgccacggcgaagcc 1032

                                                 
Query: 420  cacccgggtcacggtcagcgcggacgcctggtagcac 456
             | ||| |||  |   |||||||||||| ||||||||
Sbjct: 1031 gagccgcgtcgtgccgagcgcggacgcccggtagcac 995



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                          
Query: 195  cgtctccttcacgagatcgaacatcagcaggttgttctccatctgg 240
            |||| ||||| | ||||| |||| |||||| |||||||||||||||
Sbjct: 1250 cgtccccttctccagatcaaacagcagcagattgttctccatctgg 1205
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>dbj|AK111477.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-A02, full
           insert sequence
          Length = 1075

 Score =  105 bits (53), Expect = 1e-19
 Identities = 131/157 (83%)
 Strand = Plus / Plus

                                                                       
Query: 300 catctggacgaacgcgaagcacacggtctggttgttcacctgcacgagcgagctggcgcc 359
           ||||| || ||||||||||||||| ||||| | || ||||||||| ||||||||| ||||
Sbjct: 251 catctcgaggaacgcgaagcacaccgtctgttcgtccacctgcaccagcgagctgccgcc 310

                                                                       
Query: 360 gggcagcgtccagttccggccaccgtccagcatcagctcgatgttggccacgccgtagcc 419
           ||| |||||||||| |||||| ||| |||||| ||| |||||||| |||||| || ||||
Sbjct: 311 ggggagcgtccagtcccggccgccgcccagcaccaggtcgatgttcgccacggcgaagcc 370

                                                
Query: 420 cacccgggtcacggtcagcgcggacgcctggtagcac 456
            | ||| |||  |   |||||||||||| ||||||||
Sbjct: 371 gagccgcgtcgtgccgagcgcggacgcccggtagcac 407



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 195 cgtctccttcacgagatcgaacatcagcaggttgttctccatctgg 240
           |||| ||||| | ||||| |||| |||||| |||||||||||||||
Sbjct: 152 cgtccccttctccagatcaaacagcagcagattgttctccatctgg 197
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>ref|NM_190067.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1305

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 211  tcgaacatcagcaggttgttctccatctggtgccccccgaggatcaccgccggcg 265
            ||||||| || |||||||| ||||||||| ||||| |||| ||||||||||||||
Sbjct: 1196 tcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcg 1142
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                       
Query: 211      tcgaacatcagcaggttgttctccatctggtgccccccgaggatcaccgccggcg 265
                ||||||| || |||||||| ||||||||| ||||| |||| ||||||||||||||
Sbjct: 41118988 tcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcg 41119042



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 227      tgttctccatctggtgccccccgaggatcaccgccggcga 266
                ||||||||||||||  ||| ||||||||||||||||||||
Sbjct: 41134602 tgttctccatctggaaccctccgaggatcaccgccggcga 41134641



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                       
Query: 211      tcgaacatcagcaggttgttctccatctggtgccccccgaggatcaccgccggcg 265
                ||||||| || |||||||||||||||||||  ||| |||| |||| |||||||||
Sbjct: 41131802 tcgaacaccaccaggttgttctccatctggaaccctccgatgatcgccgccggcg 41131856



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                     
Query: 211      tcgaacatcagcaggttgttctccatctggtgccccccgaggatcaccgccgg 263
                ||||||| || |||||||| ||||||||||||||| ||||  | |||||||||
Sbjct: 41126162 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccgccgg 41126214



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 136      gtgaagttgaagttgctgcaggt 158
                |||||||||||||||||||||||
Sbjct: 41131727 gtgaagttgaagttgctgcaggt 41131749



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 136      gtgaagttgaagttgctgcaggt 158
                |||||||||||||||||||||||
Sbjct: 41126087 gtgaagttgaagttgctgcaggt 41126109



 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 275      ccgcgggcatggacgacgacgacg 298
                |||| |||||||||||||||||||
Sbjct: 40891976 ccgccggcatggacgacgacgacg 40891999
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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                    
Query: 211   tcgaacatcagcaggttgttctccatctggtgccccccgaggatcaccgccggcg 265
             ||||||| || |||||||| ||||||||| ||||| |||| ||||||||||||||
Sbjct: 16043 tcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcg 16097



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 227   tgttctccatctggtgccccccgaggatcaccgccggcga 266
             ||||||||||||||  ||| ||||||||||||||||||||
Sbjct: 31657 tgttctccatctggaaccctccgaggatcaccgccggcga 31696



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                    
Query: 211   tcgaacatcagcaggttgttctccatctggtgccccccgaggatcaccgccggcg 265
             ||||||| || |||||||||||||||||||  ||| |||| |||| |||||||||
Sbjct: 28857 tcgaacaccaccaggttgttctccatctggaaccctccgatgatcgccgccggcg 28911



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                  
Query: 211   tcgaacatcagcaggttgttctccatctggtgccccccgaggatcaccgccgg 263
             ||||||| || |||||||| ||||||||||||||| ||||  | |||||||||
Sbjct: 23217 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccgccgg 23269



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 136   gtgaagttgaagttgctgcaggt 158
             |||||||||||||||||||||||
Sbjct: 28782 gtgaagttgaagttgctgcaggt 28804



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 136   gtgaagttgaagttgctgcaggt 158
             |||||||||||||||||||||||
Sbjct: 23142 gtgaagttgaagttgctgcaggt 23164
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>dbj|AK073591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051M04, full
            insert sequence
          Length = 1520

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 211  tcgaacatcagcaggttgttctccatctggtgccccccgaggatcaccgccggcg 265
            ||||||| || |||||||| ||||||||| ||||| |||| ||||||||||||||
Sbjct: 1210 tcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcg 1156



 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 447 ctggtagcacaggtcgaacggc 468
           ||||||||||||||||||||||
Sbjct: 995 ctggtagcacaggtcgaacggc 974
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>ref|NM_190072.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1260

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 227  tgttctccatctggtgccccccgaggatcaccgccggcga 266
            ||||||||||||||  ||| ||||||||||||||||||||
Sbjct: 1162 tgttctccatctggaaccctccgaggatcaccgccggcga 1123
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>dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B07, full
            insert sequence
          Length = 1404

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 227  tgttctccatctggtgccccccgaggatcaccgccggcga 266
            ||||||||||||||  ||| ||||||||||||||||||||
Sbjct: 1174 tgttctccatctggaaccctccgaggatcaccgccggcga 1135
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>ref|NM_190071.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1275

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                   
Query: 211  tcgaacatcagcaggttgttctccatctggtgccccccgaggatcaccgccggcg 265
            ||||||| || |||||||||||||||||||  ||| |||| |||| |||||||||
Sbjct: 1187 tcgaacaccaccaggttgttctccatctggaaccctccgatgatcgccgccggcg 1133



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 136  gtgaagttgaagttgctgcaggt 158
            |||||||||||||||||||||||
Sbjct: 1262 gtgaagttgaagttgctgcaggt 1240
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>ref|NM_190069.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1269

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 211  tcgaacatcagcaggttgttctccatctggtgccccccgaggatcaccgccgg 263
            ||||||| || |||||||| ||||||||||||||| ||||  | |||||||||
Sbjct: 1181 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccgccgg 1129



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 136  gtgaagttgaagttgctgcaggt 158
            |||||||||||||||||||||||
Sbjct: 1256 gtgaagttgaagttgctgcaggt 1234
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>dbj|AK108620.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-147-C07, full
            insert sequence
          Length = 1405

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 211  tcgaacatcagcaggttgttctccatctggtgccccccgaggatcaccgccgg 263
            ||||||| || |||||||| ||||||||||||||| ||||  | |||||||||
Sbjct: 1102 tcgaacaccaccaggttgtgctccatctggtgcccgccgatcaccaccgccgg 1050



 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 136  gtgaagttgaagttgctgcaggt 158
            |||||||||||||||||||||||
Sbjct: 1177 gtgaagttgaagttgctgcaggt 1155
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>emb|AJ581532.1|SCE581532 Secale cereale xi-II/III gene for xylanase inhibitor
          Length = 1245

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 231  ctccatctggtgccccccgaggatcaccgccggcg 265
            ||||||||||  ||| |||||||||||||||||||
Sbjct: 1115 ctccatctgggcccctccgaggatcaccgccggcg 1081
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>emb|AJ581531.1|SCE581531 Secale cereale partial xi-IV gene for xylanase inhibitor
          Length = 737

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 231 ctccatctggtgccccccgaggatcaccgccggcg 265
           ||||||||||  ||| |||||||||||||||||||
Sbjct: 507 ctccatctgggcccctccgaggatcaccgccggcg 473
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>emb|AJ581529.1|HVU581529 Hordeum vulgare xi gene for xylanase inhibitor
          Length = 1255

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 231  ctccatctggtgccccccgaggatcaccgccggcg 265
            ||||||||||  ||| |||||||||||||||||||
Sbjct: 1137 ctccatctgggcccctccgaggatcaccgccggcg 1103
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>dbj|AB114626.1| Triticum aestivum taxi-I mRNA for xylanase inhibitor TAXI-I, complete
            cds
          Length = 1374

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 231  ctccatctggtgccccccgaggatcaccgccggcg 265
            ||||||||||  ||| |||||||||||||||||||
Sbjct: 1183 ctccatctgggcccctccgaggatcaccgccggcg 1149
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>emb|AJ438880.1|TAE438880 Triticum aestivum xiI gene for xylanase inhibitor
          Length = 1298

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                               
Query: 231  ctccatctggtgccccccgaggatcaccgccggcg 265
            ||||||||||  ||| |||||||||||||||||||
Sbjct: 1175 ctccatctgggcccctccgaggatcaccgccggcg 1141
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>gb|AE005121.1| Halobacterium sp. NRC-1 section 152 of 170 of the complete genome
          Length = 10208

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 258  cgccggcgagtcgagcgccgcg 279
            ||||||||||||||||||||||
Sbjct: 7719 cgccggcgagtcgagcgccgcg 7740
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>ref|XM_472749.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1194

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 281 gcatggacgacgacgacgccatctggacg 309
           ||||||||| ||||||||||||| |||||
Sbjct: 167 gcatggacgccgacgacgccatccggacg 195
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>gb|BT018606.1| Zea mays clone EL01N0450E05.d mRNA sequence
          Length = 1806

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 280 ggcatggacgacgacgacgcc 300
           |||||||||||||||||||||
Sbjct: 133 ggcatggacgacgacgacgcc 153
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 479   ccgcgcgcgcgatgccgctcgtcgccgcg 507
             ||||||||||||||||| || ||||||||
Sbjct: 61587 ccgcgcgcgcgatgccgatcctcgccgcg 61615
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>gb|AC163894.2| Glomus intraradices clone JGIATSX-9F17, complete sequence
          Length = 37905

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 129   ccccatggtgaagttgaagtt 149
             |||||||||||||||||||||
Sbjct: 20359 ccccatggtgaagttgaagtt 20339
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>gb|AC141640.3| Mus musculus BAC clone RP23-319E4 from chromosome 19, complete sequence
          Length = 167363

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 332    tgttcacctgcacgagcgagctggc 356
              |||||||||||||||| ||||||||
Sbjct: 147211 tgttcacctgcacgagtgagctggc 147187
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 479     ccgcgcgcgcgatgccgctcgtcgccgcg 507
               ||||||||||||||||| || ||||||||
Sbjct: 1421346 ccgcgcgcgcgatgccgatcctcgccgcg 1421374
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>emb|AL606460.3|OSJN00003 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072F16,
             complete sequence
          Length = 176383

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 281   gcatggacgacgacgacgccatctggacg 309
             ||||||||| ||||||||||||| |||||
Sbjct: 39235 gcatggacgccgacgacgccatccggacg 39263
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 491     tgccgctcgtcgccgcgtcga 511
               |||||||||||||||||||||
Sbjct: 1155407 tgccgctcgtcgccgcgtcga 1155387
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 479     ccgcgcgcgcgatgccgctcgtcgccgcg 507
               ||||||||||||||||| || ||||||||
Sbjct: 1070044 ccgcgcgcgcgatgccgatcctcgccgcg 1070072
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 281      gcatggacgacgacgacgccatctggacg 309
                ||||||||| ||||||||||||| |||||
Sbjct: 22944779 gcatggacgccgacgacgccatccggacg 22944807
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 258      cgccggcgagtcgagcgccgc 278
                |||||||||||||||||||||
Sbjct: 25267176 cgccggcgagtcgagcgccgc 25267196
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>dbj|AK108003.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-G08, full
           insert sequence
          Length = 567

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 258 cgccggcgagtcgagcgccgc 278
           |||||||||||||||||||||
Sbjct: 289 cgccggcgagtcgagcgccgc 269
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>gb|AY104865.1| Zea mays PCO099871 mRNA sequence
          Length = 1968

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 280 ggcatggacgacgacgacgcc 300
           |||||||||||||||||||||
Sbjct: 294 ggcatggacgacgacgacgcc 314
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 271     agcgccgcgggcatggacgac 291
               |||||||||||||||||||||
Sbjct: 2832861 agcgccgcgggcatggacgac 2832841
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 258      cgccggcgagtcgagcgccgc 278
                |||||||||||||||||||||
Sbjct: 25195352 cgccggcgagtcgagcgccgc 25195372
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>emb|AL732535.4|CNS08C9A Oryza sativa chromosome 12, . BAC OSJNBa0035N13 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 158927

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 258   cgccggcgagtcgagcgccgc 278
             |||||||||||||||||||||
Sbjct: 70014 cgccggcgagtcgagcgccgc 69994
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>gb|AC122846.4| Mus musculus BAC clone RP23-156M18 from 19, complete sequence
          Length = 217949

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 332    tgttcacctgcacgagcgagctggc 356
              |||||||||||||||| ||||||||
Sbjct: 204595 tgttcacctgcacgagtgagctggc 204619



 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 332   tgttcacctgcacgagcgagctggc 356
             |||||||||||||||| ||||||||
Sbjct: 38217 tgttcacctgcacgagtgagctggc 38241
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>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 470     ccaccttgtccgcgcgcgcg 489
               ||||||||||||||||||||
Sbjct: 1748279 ccaccttgtccgcgcgcgcg 1748298
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>ref|XM_629011.1| Dictyostelium discoideum hypothetical protein (DDB0219875), partial
           mRNA
          Length = 336

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 gtgaagttgaagttgctgca 155
           ||||||||||||||||||||
Sbjct: 308 gtgaagttgaagttgctgca 327
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>ref|XM_629010.1| Dictyostelium discoideum hypothetical protein (DDB0192012), partial
           mRNA
          Length = 333

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 gtgaagttgaagttgctgca 155
           ||||||||||||||||||||
Sbjct: 305 gtgaagttgaagttgctgca 324
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>gb|DQ219479.1| wheat putative xylanase inhibitor mRNA, partial cds
          Length = 347

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 134 tggtgaagttgaagttgctgcagg 157
           ||||||| ||||||||||||||||
Sbjct: 294 tggtgaaattgaagttgctgcagg 271
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>ref|NM_190029.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 426

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 275 ccgcgggcatggacgacgacgacg 298
           |||| |||||||||||||||||||
Sbjct: 197 ccgccggcatggacgacgacgacg 220
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 479     ccgcgcgcgcgatgccgctc 498
               ||||||||||||||||||||
Sbjct: 1859021 ccgcgcgcgcgatgccgctc 1859040
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>ref|XM_369372.1| Magnaporthe grisea 70-15 chromosome III hypothetical protein
           (MG06092.4) partial mRNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 284 tggacgacgacgacgccatc 303
           ||||||||||||||||||||
Sbjct: 254 tggacgacgacgacgccatc 273
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 467     gctccaccttgtccgcgcgcgcga 490
               |||||||| |||||||||||||||
Sbjct: 2953535 gctccaccatgtccgcgcgcgcga 2953512
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 479     ccgcgcgcgcgatgccgctc 498
               ||||||||||||||||||||
Sbjct: 1606166 ccgcgcgcgcgatgccgctc 1606147
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>ref|XM_755410.1| Ustilago maydis 521 hypothetical protein (UM04356.1) partial mRNA
          Length = 9195

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 253  atcaccgccggcgagtcgagcgccgcgg 280
            ||||| ||||||| ||||||||||||||
Sbjct: 8660 atcacagccggcgtgtcgagcgccgcgg 8633
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>ref|XM_726409.1| Aspergillus fumigatus Af293 hypothetical protein (Afu6g00530)
           partial mRNA
          Length = 1524

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 134 tggtgaagttgaagttgctg 153
           ||||||||||||||||||||
Sbjct: 807 tggtgaagttgaagttgctg 788
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>ref|XM_446000.1| Candida glabrata CBS138, CAGL0F00605g partial mRNA
          Length = 1488

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 131  ccatggtgaagttgaagttg 150
            ||||||||||||||||||||
Sbjct: 1305 ccatggtgaagttgaagttg 1324
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>gb|AC110237.8| Mus musculus chromosome 5, clone RP23-104B24, complete sequence
          Length = 243323

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 132   catggtgaagttgaagttgc 151
             ||||||||||||||||||||
Sbjct: 75875 catggtgaagttgaagttgc 75856
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>emb|AL356113.8| Human DNA sequence from clone RP11-429A24 on chromosome 10 Contains part
              of a novel gene (DKFZp761L0424) (KIAA1217) and three novel
              genes (FLJ11983 FLJ14139), complete sequence
          Length = 190429

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 9      atccaattttattctcgtcacata 32
              |||| |||||||||||||||||||
Sbjct: 182838 atcctattttattctcgtcacata 182815
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>ref|XM_968893.1| PREDICTED: Tribolium castaneum similar to CG13624-PC, isoform C
           (LOC662816), mRNA
          Length = 1635

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 gtgcggatgccgaggagcag 179
           ||||||||||||||||||||
Sbjct: 877 gtgcggatgccgaggagcag 896
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 482     cgcgcgcgatgccgctcgtc 501
               ||||||||||||||||||||
Sbjct: 3072022 cgcgcgcgatgccgctcgtc 3072003
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>emb|CR380952.1| Candida glabrata strain CBS138 chromosome F complete sequence
          Length = 927101

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 131   ccatggtgaagttgaagttg 150
             ||||||||||||||||||||
Sbjct: 64658 ccatggtgaagttgaagttg 64677
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>emb|BX927149.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 2/10
          Length = 349887

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 337    acctgcacgagcgagctggc 356
              ||||||||||||||||||||
Sbjct: 311932 acctgcacgagcgagctggc 311951
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>emb|BX572608.1| Rhodopseudomonas palustris CGA009 complete genome; segment 16/16
          Length = 227214

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 504   cgcgtcgaacgcgttgcgga 523
             ||||||||||||||||||||
Sbjct: 85945 cgcgtcgaacgcgttgcgga 85964
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 479     ccgcgcgcgcgatgccgctc 498
               ||||||||||||||||||||
Sbjct: 1493303 ccgcgcgcgcgatgccgctc 1493284
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>emb|AJ581530.1|SCE581530 Secale cereale partial xi-I gene for xylanase inhibitor
          Length = 578

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 34/36 (94%), Gaps = 2/36 (5%)
 Strand = Plus / Minus

                                               
Query: 231 ctccatctggtgcccc-ccgaggatcaccgccggcg 265
           ||||||||| |||||| |||||||||||||||||||
Sbjct: 507 ctccatctg-tgcccctccgaggatcaccgccggcg 473
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>gb|AC105350.2| Drosophila melanogaster X BAC RP98-30C13 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 184334

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 137    tgaagttgaagttgctgcag 156
              ||||||||||||||||||||
Sbjct: 101897 tgaagttgaagttgctgcag 101878
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>ref|NM_132328.1| Drosophila melanogaster CG17446-RA (CG17446), mRNA
          Length = 1992

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 137  tgaagttgaagttgctgcag 156
            ||||||||||||||||||||
Sbjct: 1916 tgaagttgaagttgctgcag 1897
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 147     gttgctgcaggtagtgcggatgcc 170
               |||||||||||||||| |||||||
Sbjct: 3840646 gttgctgcaggtagtgtggatgcc 3840623
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 246      cccgaggatcaccgccggcg 265
                ||||||||||||||||||||
Sbjct: 28108459 cccgaggatcaccgccggcg 28108440
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>ref|XM_394491.2| PREDICTED: Apis mellifera similar to GA13060-PA (LOC411018), mRNA
          Length = 5919

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 278  cgggcatggacgacgacgac 297
            ||||||||||||||||||||
Sbjct: 3923 cgggcatggacgacgacgac 3942
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>emb|BX831091.1|CNS0A0PM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS56ZG09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1728

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 gtctccttcacgagatcgaa 215
           ||||||||||||||||||||
Sbjct: 474 gtctccttcacgagatcgaa 493
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 337    acctgcacgagcgagctggc 356
              ||||||||||||||||||||
Sbjct: 658492 acctgcacgagcgagctggc 658511
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>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506E04
          Length = 139934

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 275    ccgcgggcatggacgacgacgacg 298
              |||| |||||||||||||||||||
Sbjct: 104082 ccgccggcatggacgacgacgacg 104105
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>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0423A12
          Length = 178649

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 275   ccgcgggcatggacgacgacgacg 298
             |||| |||||||||||||||||||
Sbjct: 20401 ccgccggcatggacgacgacgacg 20424
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>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496D04
          Length = 197358

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 147   gttgctgcaggtagtgcggatgcc 170
             |||||||||||||||| |||||||
Sbjct: 79758 gttgctgcaggtagtgtggatgcc 79735
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>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0009H10
          Length = 175754

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 246   cccgaggatcaccgccggcg 265
             ||||||||||||||||||||
Sbjct: 39365 cccgaggatcaccgccggcg 39346
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>gb|AE003446.4| Drosophila melanogaster chromosome X, section 30 of 74 of the complete
              sequence
          Length = 290970

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    tgaagttgaagttgctgcag 156
              ||||||||||||||||||||
Sbjct: 221824 tgaagttgaagttgctgcag 221843
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>gb|AC115725.9| Mus musculus chromosome 5, clone RP23-21A18, complete sequence
          Length = 278172

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 132   catggtgaagttgaagttgc 151
             ||||||||||||||||||||
Sbjct: 15535 catggtgaagttgaagttgc 15554
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>emb|Y11398.1|LDY11398 L.donovani kinetoplast minicircle DNA, 819 bp
          Length = 819

 Score = 40.1 bits (20), Expect = 7.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 278 cgggcatggacgacgacgac 297
           ||||||||||||||||||||
Sbjct: 561 cgggcatggacgacgacgac 580


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,134,126
Number of Sequences: 3902068
Number of extensions: 3134126
Number of successful extensions: 68076
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 65408
Number of HSP's gapped (non-prelim): 2669
length of query: 525
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 502
effective length of database: 17,143,297,704
effective search space: 8605935447408
effective search space used: 8605935447408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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