ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC071815.1| Homo sapiens 2-aminoadipic 6-semialdehyde dehydro... 42 0.44
2ref|NM_181806.2| Homo sapiens 2-aminoadipic 6-semialdehyde dehyd... 42 0.44
3gb|AY422212.1| Homo sapiens putative non-ribosomal peptide synth... 42 0.44
4emb|BX640635.1|HSM806681 Homo sapiens mRNA; cDNA DKFZp779L0612 (... 42 0.44
5gb|AF516672.1| Homo sapiens putative non-ribosomal peptide synth... 42 0.44
6gb|AC068620.5| Homo sapiens BAC clone RP11-646I6 from 4, complet... 42 0.44
7gb|AY314787.1| Homo sapiens 2-aminoadipic 6-semialdehyde dehydro... 42 0.44
8emb|AL034417.14|HS215D11 Human DNA sequence from clone CTA-215D1... 40 1.8
9emb|BX324134.11| Zebrafish DNA sequence from clone DKEY-103K8 in... 40 1.8
10gb|AC010975.9| Homo sapiens BAC clone RP11-191H23 from 2, comple... 40 1.8
11gb|AC113417.2| Homo sapiens chromosome 5 clone RP11-569B5, compl... 40 1.8
12dbj|AP002358.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 1.8
13gb|AF038667.1| Homo sapiens clone c102D0968, complete sequence 38 6.9
14gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 38 6.9
15gb|AC112149.4| Mus musculus BAC clone RP23-186F18 from chromosom... 38 6.9
16gb|AC127359.4| Mus musculus BAC clone RP23-110G23 from chromosom... 38 6.9
17ref|XM_724113.1| Plasmodium yoelii yoelii str. 17XNL ubiquitin c... 38 6.9
18emb|BX664735.7| Human DNA sequence from clone RP11-665E4 on chro... 38 6.9
19emb|BX664726.5| Human DNA sequence from clone RP11-95H8 on chrom... 38 6.9
20emb|BX005214.7| Human DNA sequence from clone RP11-347J14 on chr... 38 6.9
21emb|AL954139.7| Human DNA sequence from clone RP11-100J16 on chr... 38 6.9
22emb|AL596385.12| Human DNA sequence from clone RP11-95K23 on chr... 38 6.9
23emb|AL590491.13| Human DNA sequence from clone RP11-144A16 on ch... 38 6.9
24emb|AL445584.16| Human DNA sequence from clone RP11-366N18 on ch... 38 6.9
25emb|AL353770.18| Human DNA sequence from clone RP11-395E19 on ch... 38 6.9
26emb|AL138715.11| Human DNA sequence from clone RP11-77P19 on chr... 38 6.9
27emb|AL136124.10| Human DNA sequence from clone RP4-792D7 on chro... 38 6.9
28emb|AL118525.17|HSBA298O6 Human DNA sequence from clone RP11-298... 38 6.9
29emb|AL163202.2|HS21C002 Homo sapiens chromosome 21 segment HS21C002 38 6.9
30gb|AC131602.4| Rattus norvegicus 2 BAC CH230-33J10 (Children's H... 38 6.9
31gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 38 6.9
32emb|AL596171.1| Listeria innocua Clip11262 complete genome, segm... 38 6.9
33gb|AF334830.1| Homo sapiens cartilage-hair hypoplasia region gen... 38 6.9
34gb|AC055731.22| Homo sapiens 3 BAC RP11-588D3 (Roswell Park Canc... 38 6.9
35gb|AC158807.11| Mus musculus 10 BAC RP24-64G24 (Roswell Park Can... 38 6.9
36gb|AC015971.4| Homo sapiens BAC clone RP11-269K22 from 2, comple... 38 6.9
37ref|XM_346318.2| PREDICTED: Rattus norvegicus similar to sex-det... 38 6.9
38dbj|BS000222.1| Pan troglodytes chromosome 22 clone:RP43-111J12,... 38 6.9
39dbj|AP001170.2| Homo sapiens genomic DNA, chromosome 21q, clone:... 38 6.9
40emb|BX005014.5| Zebrafish DNA sequence from clone CH211-103E2 in... 38 6.9
41emb|AL135841.11| Human DNA sequence from clone RP11-327L3 on chr... 38 6.9
42gb|AC135017.3| Mus musculus BAC clone RP24-254D14 from 1, comple... 38 6.9
43emb|BX005192.7| Human DNA sequence from clone RP11-211N15 on chr... 38 6.9
44dbj|AP005242.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 38 6.9 
>gb|BC071815.1| Homo sapiens 2-aminoadipic 6-semialdehyde dehydrogenase, mRNA (cDNA
           clone IMAGE:6495991), partial cds
          Length = 612

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 1   atcaaaaataatcaaatacag 21
           |||||||||||||||||||||
Sbjct: 390 atcaaaaataatcaaatacag 410
to top
>ref|NM_181806.2| Homo sapiens 2-aminoadipic 6-semialdehyde dehydrogenase (AASDH), mRNA
          Length = 3573

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    atcaaaaataatcaaatacag 21
            |||||||||||||||||||||
Sbjct: 3440 atcaaaaataatcaaatacag 3460
to top
>gb|AY422212.1| Homo sapiens putative non-ribosomal peptide synthetase NRPS1098 mRNA,
            complete cds
          Length = 3528

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    atcaaaaataatcaaatacag 21
            |||||||||||||||||||||
Sbjct: 3391 atcaaaaataatcaaatacag 3411
to top
>emb|BX640635.1|HSM806681 Homo sapiens mRNA; cDNA DKFZp779L0612 (from clone DKFZp779L0612)
          Length = 4443

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    atcaaaaataatcaaatacag 21
            |||||||||||||||||||||
Sbjct: 4307 atcaaaaataatcaaatacag 4327
to top
>gb|AF516672.1| Homo sapiens putative non-ribosomal peptide synthetase NRPS998 mRNA,
            complete cds
          Length = 3256

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    atcaaaaataatcaaatacag 21
            |||||||||||||||||||||
Sbjct: 3119 atcaaaaataatcaaatacag 3139
to top
>gb|AC068620.5| Homo sapiens BAC clone RP11-646I6 from 4, complete sequence
          Length = 147534

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 1     atcaaaaataatcaaatacag 21
             |||||||||||||||||||||
Sbjct: 41918 atcaaaaataatcaaatacag 41898
to top
>gb|AY314787.1| Homo sapiens 2-aminoadipic 6-semialdehyde dehydrogenase mRNA,
            complete cds
          Length = 3553

 Score = 42.1 bits (21), Expect = 0.44
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 1    atcaaaaataatcaaatacag 21
            |||||||||||||||||||||
Sbjct: 3439 atcaaaaataatcaaatacag 3459
to top
>emb|AL034417.14|HS215D11 Human DNA sequence from clone CTA-215D11 on chromosome 1p36.12-36.33
             Contains the PARK7 gene for Parkinson disease (autosomal
             recessive, early onset) 7, a novel gene, gene 33/Mig-6
             (MIG-6), a ribosomal protein L7a (RPL7A) pseudogene, the
             5' end of a novel gene (FLJ26758) and two CpG islands,
             complete sequence
          Length = 122279

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaaaataatcaaataca 20
             ||||||||||||||||||||
Sbjct: 91314 atcaaaaataatcaaataca 91333
to top
>emb|BX324134.11| Zebrafish DNA sequence from clone DKEY-103K8 in linkage group 6, complete
              sequence
          Length = 219514

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      tcaaaaataatcaaatacag 21
              ||||||||||||||||||||
Sbjct: 192240 tcaaaaataatcaaatacag 192259
to top
>gb|AC010975.9| Homo sapiens BAC clone RP11-191H23 from 2, complete sequence
          Length = 171249

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 2     tcaaaaataatcaaatacag 21
             ||||||||||||||||||||
Sbjct: 97418 tcaaaaataatcaaatacag 97399
to top
>gb|AC113417.2| Homo sapiens chromosome 5 clone RP11-569B5, complete sequence
          Length = 79230

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     atcaaaaataatcaaataca 20
             ||||||||||||||||||||
Sbjct: 45821 atcaaaaataatcaaataca 45840
to top
>dbj|AP002358.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-1036E20, complete
              sequences
          Length = 190904

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      tcaaaaataatcaaatacag 21
              ||||||||||||||||||||
Sbjct: 141215 tcaaaaataatcaaatacag 141234
to top
>gb|AF038667.1| Homo sapiens clone c102D0968, complete sequence
          Length = 36697

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 111   caaaacgtaaaaacaaagtaagt 133
             ||||| |||||||||||||||||
Sbjct: 20424 caaaaagtaaaaacaaagtaagt 20446
to top
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 3       caaaaataatcaaatacag 21
               |||||||||||||||||||
Sbjct: 1363436 caaaaataatcaaatacag 1363454
to top
>gb|AC112149.4| Mus musculus BAC clone RP23-186F18 from chromosome 10, complete
             sequence
          Length = 195384

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 24    atatatcatttttattggc 42
             |||||||||||||||||||
Sbjct: 25702 atatatcatttttattggc 25684
to top
>gb|AC127359.4| Mus musculus BAC clone RP23-110G23 from chromosome 1, complete
            sequence
          Length = 185255

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 4    aaaaataatcaaatacagg 22
            |||||||||||||||||||
Sbjct: 5864 aaaaataatcaaatacagg 5846
to top
>ref|XM_724113.1| Plasmodium yoelii yoelii str. 17XNL ubiquitin carboxyl-terminal
            hydrolase family 2 (PY01440) partial mRNA
          Length = 8397

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 4    aaaaataatcaaatacagg 22
            |||||||||||||||||||
Sbjct: 1774 aaaaataatcaaatacagg 1792
to top
>emb|BX664735.7| Human DNA sequence from clone RP11-665E4 on chromosome 9 Contains the
             5' end of the gene for a novel protein similar to
             contactin associated protein-like 3 (CNTNAP3) and a CpG
             island, complete sequence
          Length = 187005

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     atcaaaaataatcaaatac 19
             |||||||||||||||||||
Sbjct: 19397 atcaaaaataatcaaatac 19415
to top
>emb|BX664726.5| Human DNA sequence from clone RP11-95H8 on chromosome 9 Contains a
             pseudogene similar to part of  6-pyruvoyltetrahydropterin
             synthase (PTS), a novel gene similar to c9orf36, two novel
             genes and a novel pseudogene, complete sequence
          Length = 144571

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     atcaaaaataatcaaatac 19
             |||||||||||||||||||
Sbjct: 23911 atcaaaaataatcaaatac 23929
to top
>emb|BX005214.7| Human DNA sequence from clone RP11-347J14 on chromosome 9 Contains the
              C9orf36 gene for chromosome 9 open reading frame 36, two
              novel pseudogenes, a 6-pyruvoyltetrahydropterin synthase
              (PTS) pseudogene and two novel genes, complete sequence
          Length = 143520

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      atcaaaaataatcaaatac 19
              |||||||||||||||||||
Sbjct: 119440 atcaaaaataatcaaatac 119422
to top
>emb|AL954139.7| Human DNA sequence from clone RP11-100J16 on chromosome 9 Contains a
             novel gene, a novel zinc finger pseudogene, S-phase
             kinase-associated protein 1A (SKP1A) pseudogene, a
             pseudogene similar to part of 6-pyruvoyltetrahydropterin
             synthase (PTS) and a CpG island, complete sequence
          Length = 159990

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     atcaaaaataatcaaatac 19
             |||||||||||||||||||
Sbjct: 67813 atcaaaaataatcaaatac 67795
to top
>emb|AL596385.12| Human DNA sequence from clone RP11-95K23 on chromosome 9 Contains the
             gene for a novel protein similar to FLJ45202, the gene for
             a novel protein similar to chromosome 9 open reading frame
             36 (C9orf36), a pseudogene similar to part of contactin
             associated protein-like 4 (CNTNAP4), a novel pseudogene,
             three novel genes and a CpG island, complete sequence
          Length = 172579

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     atcaaaaataatcaaatac 19
             |||||||||||||||||||
Sbjct: 71378 atcaaaaataatcaaatac 71396
to top
>emb|AL590491.13| Human DNA sequence from clone RP11-144A16 on chromosome 9 Contains a
              pseudogene similar to part of contactin associated protein
              family, a novel pseudogene, the gene for a novel protein
              similar to chromosome 9 open reading frame 36 (C9orf36),
              two novel genes, a 6-pyruvoyltetrahydropterin synthase
              (PTS) pseudogene and a CpG island, complete sequence
          Length = 174366

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      atcaaaaataatcaaatac 19
              |||||||||||||||||||
Sbjct: 150869 atcaaaaataatcaaatac 150851
to top
>emb|AL445584.16| Human DNA sequence from clone RP11-366N18 on chromosome 9 Contains the
             gene for a novel protein similar to chromosome 9 open
             reading frame 36 (C9orf36), a 6-pyruvoyltetrahydropterin
             synthase (PTS) pseudogene and a CpG island, complete
             sequence
          Length = 184313

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 1     atcaaaaataatcaaatac 19
             |||||||||||||||||||
Sbjct: 90773 atcaaaaataatcaaatac 90755
to top
>emb|AL353770.18| Human DNA sequence from clone RP11-395E19 on chromosome 9 Contains a
             novel pseudogene, the gene for a novel protein similar to
             chromosome 9 open reading frame 36 (C9orf36), a
             6-pyruvoyltetrahydropterin synthase (PTS-P1) pseudogene
             and three novel genes, complete sequence
          Length = 130898

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     atcaaaaataatcaaatac 19
             |||||||||||||||||||
Sbjct: 18202 atcaaaaataatcaaatac 18220
to top
>emb|AL138715.11| Human DNA sequence from clone RP11-77P19 on chromosome 13 Contains a
              novel zinc finger protein pseudogene, a novel gene, the 5'
              end of a novel gene and a CpG island, complete sequence
          Length = 161183

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 111    caaaacgtaaaaacaaagtaagt 133
              ||||| |||||||||||||||||
Sbjct: 120940 caaaaagtaaaaacaaagtaagt 120962
to top
>emb|AL136124.10| Human DNA sequence from clone RP4-792D7 on chromosome 1q42.2-43
             Contains the 5' end of the TARBP1 gene for TAR (HIV) RNA
             binding protein 1 and a CpG island, complete sequence
          Length = 104632

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 119   aaaaacaaagtaagtacag 137
             |||||||||||||||||||
Sbjct: 47550 aaaaacaaagtaagtacag 47568
to top
>emb|AL118525.17|HSBA298O6 Human DNA sequence from clone RP11-298O6 on chromosome 20 Contains the
             PTGIS gene for prostaglandin I2 (prostacyclin) synthase,
             ESTs, STSs, GSSs and a CpG Island, complete sequence
          Length = 103747

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    acagggatatatcattttt 36
             |||||||||||||||||||
Sbjct: 12543 acagggatatatcattttt 12561
to top
>emb|AL163202.2|HS21C002 Homo sapiens chromosome 21 segment HS21C002
          Length = 340000

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 111    caaaacgtaaaaacaaagtaagt 133
              ||||| |||||||||||||||||
Sbjct: 229274 caaaaagtaaaaacaaagtaagt 229296
to top
>gb|AC131602.4| Rattus norvegicus 2 BAC CH230-33J10 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 216155

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 111   caaaacgtaaaaacaaagtaagt 133
             ||||| |||||||||||||||||
Sbjct: 90600 caaaaagtaaaaacaaagtaagt 90578
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 31      atttttattggcccggatc 49
               |||||||||||||||||||
Sbjct: 1147987 atttttattggcccggatc 1148005
to top
>emb|AL596171.1| Listeria innocua Clip11262 complete genome, segment 9/12
          Length = 258650

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 118   taaaaacaaagtaagtaca 136
             |||||||||||||||||||
Sbjct: 73985 taaaaacaaagtaagtaca 74003
to top
>gb|AF334830.1| Homo sapiens cartilage-hair hypoplasia region gene sequence
          Length = 138754

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 14     aaatacagggatatatcatttttattg 40
              |||||||||||||  ||||||||||||
Sbjct: 108274 aaatacagggatacctcatttttattg 108248
to top
>gb|AC055731.22| Homo sapiens 3 BAC RP11-588D3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 152537

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 111   caaaacgtaaaaacaaagt 129
             |||||||||||||||||||
Sbjct: 12275 caaaacgtaaaaacaaagt 12257
to top
>gb|AC158807.11| Mus musculus 10 BAC RP24-64G24 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 228073

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 24    atatatcatttttattggc 42
             |||||||||||||||||||
Sbjct: 61961 atatatcatttttattggc 61979
to top
>gb|AC015971.4| Homo sapiens BAC clone RP11-269K22 from 2, complete sequence
          Length = 163852

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      atcaaaaataatcaaatac 19
              |||||||||||||||||||
Sbjct: 142325 atcaaaaataatcaaatac 142343
to top
>ref|XM_346318.2| PREDICTED: Rattus norvegicus similar to sex-determining protein Zfx -
            mouse (LOC367832), mRNA
          Length = 3442

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 111  caaaacgtaaaaacaaagt 129
            |||||||||||||||||||
Sbjct: 2897 caaaacgtaaaaacaaagt 2879
to top
>dbj|BS000222.1| Pan troglodytes chromosome 22 clone:RP43-111J12, map 22, complete
             sequences
          Length = 189474

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 111   caaaacgtaaaaacaaagtaagt 133
             ||||| |||||||||||||||||
Sbjct: 65221 caaaaagtaaaaacaaagtaagt 65243
to top
>dbj|AP001170.2| Homo sapiens genomic DNA, chromosome 21q, clone:CMF21-92B11, complete
             sequence
          Length = 36463

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 111   caaaacgtaaaaacaaagtaagt 133
             ||||| |||||||||||||||||
Sbjct: 10907 caaaaagtaaaaacaaagtaagt 10929
to top
>emb|BX005014.5| Zebrafish DNA sequence from clone CH211-103E2 in linkage group 10,
             complete sequence
          Length = 160621

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 2     tcaaaaataatcaaataca 20
             |||||||||||||||||||
Sbjct: 73675 tcaaaaataatcaaataca 73657
to top
>emb|AL135841.11| Human DNA sequence from clone RP11-327L3 on chromosome 9p13.1-13.3
             Contains two novel genes, a phosphoglycerate mutase 1
             (brain) (PGAMA) (PGAM1) psueodgene, the OR2S2 gene for
             olfactory receptor family 2 subfamily S member 2 and a
             nuclease sensitive element binding protein 1 (YB1, BP-8,
             CSDB, DBPB, YB-1, YBX1, NSEP-1, MDR-NF1) (NSEP1)
             pseudogene, complete sequence
          Length = 99886

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 14    aaatacagggatatatcatttttattg 40
             |||||||||||||  ||||||||||||
Sbjct: 24663 aaatacagggatacctcatttttattg 24637
to top
>gb|AC135017.3| Mus musculus BAC clone RP24-254D14 from 1, complete sequence
          Length = 190598

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      aaaaataatcaaatacagg 22
              |||||||||||||||||||
Sbjct: 165072 aaaaataatcaaatacagg 165054
to top
>emb|BX005192.7| Human DNA sequence from clone RP11-211N15 on chromosome 9, complete
              sequence
          Length = 163795

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      atcaaaaataatcaaatac 19
              |||||||||||||||||||
Sbjct: 140382 atcaaaaataatcaaatac 140364
to top
>dbj|AP005242.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-805F19, complete
              sequence
          Length = 196360

 Score = 38.2 bits (19), Expect = 6.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 111    caaaacgtaaaaacaaagtaagt 133
              ||||| |||||||||||||||||
Sbjct: 133177 caaaaagtaaaaacaaagtaagt 133155


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,427,983
Number of Sequences: 3902068
Number of extensions: 1427983
Number of successful extensions: 105658
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 105514
Number of HSP's gapped (non-prelim): 144
length of query: 145
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 124
effective length of database: 17,151,101,840
effective search space: 2126736628160
effective search space used: 2126736628160
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
to top