Clone Name | rbart32d04 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline... | 31 | 1.8 |
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>EXTN_TOBAC (P13983) Extensin precursor (Cell wall hydroxyproline-rich| glycoprotein) Length = 620 Score = 31.2 bits (69), Expect = 1.8 Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 6/33 (18%) Frame = -2 Query: 392 RHGYNGDKHGHL------PEPHRGSDPVSNMFN 312 RH Y HGHL P PHRG P S FN Sbjct: 74 RHAYPPPSHGHLPPSVGGPPPHRGHLPPSRGFN 106 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,571,056 Number of Sequences: 219361 Number of extensions: 789128 Number of successful extensions: 2381 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 2331 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2380 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 3970331829 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)