>gb|AC101763.8| Mus musculus chromosome 1, clone RP24-468E2, complete sequence
          Length = 143657

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 40   tcacacttaaaacatcacaaaccaa 64
            |||||||||||||| ||||||||||
Sbjct: 8121 tcacacttaaaacagcacaaaccaa 8145

>gb|AC107669.7| Mus musculus chromosome 10, clone RP23-144A12, complete sequence
          Length = 186583

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 40    tcacacttaaaacatcacaaa 60
             |||||||||||||||||||||
Sbjct: 34625 tcacacttaaaacatcacaaa 34645

>gb|AC092095.39| Mus musculus strain C57BL/6J chromosome 10 clone rp23-34f16, complete
             sequence
          Length = 210694

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    tcacacttaaaacatcacaaa 60
             |||||||||||||||||||||
Sbjct: 68055 tcacacttaaaacatcacaaa 68035

>gb|AC102666.13| Mus musculus chromosome 1, clone RP23-444A8, complete sequence
          Length = 169085

 Score = 42.1 bits (21), Expect = 0.46
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 40    tcacacttaaaacatcacaaaccaa 64
             |||||||||||||| ||||||||||
Sbjct: 15584 tcacacttaaaacagcacaaaccaa 15560

>gb|AC168980.1| Mus musculus BAC clone RP24-484L12 from chromosome 17, complete sequence
          Length = 192097

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     atcacaaaccaacctaaaaa 72
              ||||||||||||||||||||
Sbjct: 141942 atcacaaaccaacctaaaaa 141961

>ref|XM_646680.1| Entamoeba histolytica HM-1:IMSS conserved hypothetical protein
            (148.t00014) partial mRNA
          Length = 6999

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 7    caattcaattggttgagaaa 26
            ||||||||||||||||||||
Sbjct: 5897 caattcaattggttgagaaa 5916

>gb|AC087446.13| Homo sapiens chromosome 11, clone RP11-651M4, complete sequence
          Length = 167865

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 40    tcacacttaaaacatcacaa 59
             ||||||||||||||||||||
Sbjct: 24641 tcacacttaaaacatcacaa 24660

>gb|AC103796.3| Homo sapiens chromosome 11, clone RP11-1033A18, complete sequence
          Length = 211799

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    tcacacttaaaacatcacaa 59
             ||||||||||||||||||||
Sbjct: 84601 tcacacttaaaacatcacaa 84582

>gb|AC078850.5| Homo sapiens BAC clone RP11-184M15 from 4, complete sequence
          Length = 180194

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 10    ttcaattggttgagaaacagagtg 33
             ||||||||||||||||||| ||||
Sbjct: 75144 ttcaattggttgagaaacatagtg 75167

>gb|AC083909.20|AC083909 Mus musculus 1 BAC RP23-424A2 (Roswell Park Cancer Institute Mouse BAC
              Library) complete sequence
          Length = 204857

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 59     aaccaacctaaaaatagcac 78
              ||||||||||||||||||||
Sbjct: 115544 aaccaacctaaaaatagcac 115563

>gb|AC009054.8| Homo sapiens chromosome 16 clone RP11-252K23, complete sequence
          Length = 157113

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    atgatgagaatgaggttatg 104
             ||||||||||||||||||||
Sbjct: 77864 atgatgagaatgaggttatg 77845

>gb|AC122413.4| Mus musculus BAC clone RP24-148B13 from 17, complete sequence
          Length = 172633

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 53     atcacaaaccaacctaaaaa 72
              ||||||||||||||||||||
Sbjct: 112586 atcacaaaccaacctaaaaa 112605

>gb|AC172750.1| Mus musculus BAC clone RP24-177J9 from chromosome 7, complete sequence
          Length = 145766

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 56    acaaaccaacctaaaaatagcaca 79
             ||||| ||||||||||||||||||
Sbjct: 79299 acaaaacaacctaaaaatagcaca 79322

>gb|AC167813.4| Mus musculus BAC clone RP24-233L18 from chromosome 7, complete sequence
          Length = 172485

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 56    acaaaccaacctaaaaatagcaca 79
             ||||| ||||||||||||||||||
Sbjct: 18498 acaaaacaacctaaaaatagcaca 18521

>gb|AC121276.9| Mus musculus chromosome 1, clone RP24-249B16, complete sequence
          Length = 212083

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 88     atgagaatgaggttatgcc 106
              |||||||||||||||||||
Sbjct: 151979 atgagaatgaggttatgcc 151961

>emb|CR376747.28| Zebrafish DNA sequence from clone CH211-248D20 in linkage group 8,
             complete sequence
          Length = 153394

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 52    catcacaaaccaacctaaaaata 74
             |||||||||||||||| ||||||
Sbjct: 91075 catcacaaaccaacctcaaaata 91053

>emb|AL590378.5| Human DNA sequence from clone RP11-49L2 on chromosome 10 Contains a novel
              gene and a novel MAM domain containing protein, complete
              sequence
          Length = 150889

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 9      attcaattggttgagaaac 27
              |||||||||||||||||||
Sbjct: 142588 attcaattggttgagaaac 142570

>emb|AL049538.9|HSJ1175I6 Human DNA sequence from clone RP5-1175I6 on chromosome 20 Contains the
             3' end of the RIN2 gene for Ras and Rab interactor 2, the
             5' end of the NAT5 gene for N-acetyltransferase 5 (ARD1
             homolog, S. cerevisiae) and two CpG islands, complete
             sequence
          Length = 96276

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 70    aaatagcacaagagtatga 88
             |||||||||||||||||||
Sbjct: 77764 aaatagcacaagagtatga 77746

>gb|AE014175.1| Mus musculus piebald deletion region section 3 of 11 of the complete
              sequence
          Length = 404829

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     acacttaaaacatcacaaa 60
              |||||||||||||||||||
Sbjct: 126488 acacttaaaacatcacaaa 126470

>gb|AC010284.4| Homo sapiens chromosome 5 clone CTC-558E23, complete sequence
          Length = 27491

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 89    tgagaatgaggttatgcct 107
             |||||||||||||||||||
Sbjct: 17930 tgagaatgaggttatgcct 17912

>gb|AC093871.3| Homo sapiens BAC clone RP11-608B3 from 4, complete sequence
          Length = 167818

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 12     caattggttgagaaacagagtga 34
              |||||| ||||||||||||||||
Sbjct: 155538 caattgtttgagaaacagagtga 155516

>gb|AC183494.1| Brassica oleracea Contig C, complete sequence
          Length = 285752

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 28     agagtgaattcatcacact 46
              |||||||||||||||||||
Sbjct: 211775 agagtgaattcatcacact 211757

>gb|AC147845.3| Saimiri boliviensis boliviensis clone CH254-335K11, complete sequence
          Length = 222317

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 34    aattcatcacacttaaaac 52
             |||||||||||||||||||
Sbjct: 40958 aattcatcacacttaaaac 40976

>emb|BX569778.15| Zebrafish DNA sequence from clone DKEY-21J8 in linkage group 1, complete
              sequence
          Length = 255895

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 114    cgggaaggagacgcaagat 132
              |||||||||||||||||||
Sbjct: 190388 cgggaaggagacgcaagat 190406

>gb|AC018574.6| Homo sapiens chromosome , clone RP11-4G2, complete sequence
          Length = 171858

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 129    agatatatttgccagagtt 147
              |||||||||||||||||||
Sbjct: 102132 agatatatttgccagagtt 102114

>gb|AC121569.4| Mus musculus BAC clone RP23-228C13 from chromosome 12, complete sequence
          Length = 171710

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 42     acacttaaaacatcacaaaccaa 64
              |||||| ||||||||||||||||
Sbjct: 105713 acacttgaaacatcacaaaccaa 105691

>gb|AC021887.4|AC021887 Homo sapiens BAC clone RP11-777M17 from 12, complete sequence
          Length = 194497

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 46    ttaaaacatcacaaaccaa 64
             |||||||||||||||||||
Sbjct: 24425 ttaaaacatcacaaaccaa 24443

>emb|BX088582.4| Zebrafish DNA sequence from clone CH211-188B17 in linkage group 15,
             complete sequence
          Length = 155363

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 85    atgatgagaatgaggttat 103
             |||||||||||||||||||
Sbjct: 67358 atgatgagaatgaggttat 67376

>gb|AC112485.4| Homo sapiens 3 BAC RP11-776B11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 168500

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 46     ttaaaacatcacaaaccaa 64
              |||||||||||||||||||
Sbjct: 130312 ttaaaacatcacaaaccaa 130294

>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 104   gcctctttgacgggaagga 122
             |||||||||||||||||||
Sbjct: 37252 gcctctttgacgggaagga 37234

>emb|BX649250.6| Zebrafish DNA sequence from clone DKEY-53B2 in linkage group 20, complete
              sequence
          Length = 165729

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 114    cgggaaggagacgcaagat 132
              |||||||||||||||||||
Sbjct: 142533 cgggaaggagacgcaagat 142551

>gb|AC124991.14| Mus musculus chromosome 12, clone RP23-138M19, complete sequence
          Length = 179111

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 42     acacttaaaacatcacaaaccaa 64
              |||||| ||||||||||||||||
Sbjct: 103394 acacttgaaacatcacaaaccaa 103372

>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome
          Length = 1799146

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 55      cacaaaccaacctaaaaat 73
               |||||||||||||||||||
Sbjct: 1195029 cacaaaccaacctaaaaat 1195011

>gb|AE017222.1| Thermus thermophilus HB27 plasmid pTT27, complete sequence
          Length = 232605

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 104  gcctctttgacgggaagga 122
            |||||||||||||||||||
Sbjct: 1358 gcctctttgacgggaagga 1340

>gb|AC170749.6| Mus musculus chromosome 1, clone RP23-322G4, complete sequence
          Length = 208713

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 88     atgagaatgaggttatgcc 106
              |||||||||||||||||||
Sbjct: 185003 atgagaatgaggttatgcc 185021

>gb|AC101932.9| Mus musculus chromosome 7, clone RP24-66E13, complete sequence
          Length = 214419

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 128    aagatatatttgccagagt 146
              |||||||||||||||||||
Sbjct: 123463 aagatatatttgccagagt 123445

>dbj|D49831.1| Pneumocystis carinii DNA for actin, complete cds
          Length = 2148

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 78   caagagtatgatgagaatg 96
            |||||||||||||||||||
Sbjct: 1758 caagagtatgatgagaatg 1776

>dbj|D49829.1| Pneumocystis carinii mRNA for actin, complete cds
          Length = 1398

 Score = 38.2 bits (19), Expect = 7.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 78   caagagtatgatgagaatg 96
            |||||||||||||||||||
Sbjct: 1153 caagagtatgatgagaatg 1171


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,517,727
Number of Sequences: 3902068
Number of extensions: 1517727
Number of successful extensions: 116850
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116711
Number of HSP's gapped (non-prelim): 139
length of query: 150
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 129
effective length of database: 17,151,101,840
effective search space: 2212492137360
effective search space used: 2212492137360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)