ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32c06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CBPY_YEAST (P00729) Carboxypeptidase Y precursor (EC 3.4.16.5) (... 29 4.7
2Y1777_PYRFU (Q8U040) Putative HAD-hydrolase PF1777 (EC 3.-.-.-) 29 6.2
3MIS_HUMAN (P03971) Muellerian-inhibiting factor precursor (MIS) ... 28 8.1
4CBPY_CANAL (P30574) Carboxypeptidase Y precursor (EC 3.4.16.5) (... 28 8.1

>CBPY_YEAST (P00729) Carboxypeptidase Y precursor (EC 3.4.16.5)|
           (Carboxypeptidase YSCY)
          Length = 532

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = +2

Query: 101 YTSQTIWHCAPATVY 145
           Y SQ++W C PAT+Y
Sbjct: 336 YDSQSVWSCVPATIY 350



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>Y1777_PYRFU (Q8U040) Putative HAD-hydrolase PF1777 (EC 3.-.-.-)|
          Length = 240

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -1

Query: 404 RQIPGERATILRLRPTGYCPG 342
           R++PG R T+LRL+  GY  G
Sbjct: 96  REVPGARKTLLRLKKEGYMTG 116



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>MIS_HUMAN (P03971) Muellerian-inhibiting factor precursor (MIS)|
           (Anti-Muellerian hormone) (AMH) (Mullerian-inhibiting
           substance)
          Length = 560

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
 Frame = -1

Query: 443 AVSVLPEG------PCEVRRQIPGERATILRLRPTGYCPGDQPLTGGPTSS 309
           A++  P+G      P  + R + GE   +L LRPT    GD      PTS+
Sbjct: 319 ALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSA 369



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>CBPY_CANAL (P30574) Carboxypeptidase Y precursor (EC 3.4.16.5)|
           (Carboxypeptidase YSCY)
          Length = 542

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +2

Query: 101 YTSQTIWHCAPATVYTHCSLQVQQQKDAPPPTVFRLQRSGRRSYCYCRL 247
           Y S ++W C PAT+Y +       QK        R    G  S CY +L
Sbjct: 348 YESGSVWSCVPATIYCNNGQMGPYQKTGRNVYDIRTMCEG-SSLCYSQL 395


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,659,527
Number of Sequences: 219361
Number of extensions: 1215673
Number of successful extensions: 2852
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2784
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2846
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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