>emb|X95257.1|HVXYLISOP H.vulgare mRNA for xylose isomerase
          Length = 1710

 Score =  224 bits (113), Expect = 6e-56
 Identities = 116/117 (99%)
 Strand = Plus / Minus

                                                                        
Query: 36   aagccaaattccgtgttgaagaacgagtttaattttgatataagggtacattattttcag 95
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1710 aagccaaattccgtgttgaagaacgagtttaattttgatataaggttacattattttcag 1651

                                                                     
Query: 96   ctccacgcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgc 152
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1650 ctccacgcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgc 1594

>emb|X95256.1|HVXYLISOG H.vulgare xylose isomerase gene
          Length = 4473

 Score =  224 bits (113), Expect = 6e-56
 Identities = 116/117 (99%)
 Strand = Plus / Minus

                                                                        
Query: 36   aagccaaattccgtgttgaagaacgagtttaattttgatataagggtacattattttcag 95
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4473 aagccaaattccgtgttgaagaacgagtttaattttgatataaggttacattattttcag 4414

                                                                     
Query: 96   ctccacgcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgc 152
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4413 ctccacgcagtttgtttacagggttcactgcatggaggcctaactatagaacatcgc 4357

>gb|AC149305.19| Medicago truncatula clone mth2-78k4, complete sequence
          Length = 118017

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 57    aacgagtttaattttgatata 77
             |||||||||||||||||||||
Sbjct: 91024 aacgagtttaattttgatata 91004

>emb|AL139142.10| Human DNA sequence from clone RP3-436N22 on chromosome 1q24.1-25.3
              Contains the PRDX6 gene for peroxiredoxin 6, gene MGC43026,
              a novel gene, the 3' end of a novel gene (FLJ45235) and two
              CpG islands, complete sequence
          Length = 159771

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 73     atataagggtacattattttc 93
              |||||||||||||||||||||
Sbjct: 113496 atataagggtacattattttc 113476

>emb|AL035425.13|HS24A23 Human DNA sequence from clone RP6-24A23 on chromosome Xq22.2-23
             Contains the 3' end of the COL4A5 gene for type IV alpha 5
             collagen (Alport syndrome), the IRS4 gene for insulin
             receptor substrate 4, a novel gene and a CpG island,
             complete sequence
          Length = 137100

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 63    tttaattttgatataagggta 83
             |||||||||||||||||||||
Sbjct: 69483 tttaattttgatataagggta 69463

>ref|XM_784544.1| PREDICTED: Strongylocentrotus purpuratus similar to
            Retrovirus-related Pol polyprotein from transposon 297
            (LOC584692), partial mRNA
          Length = 1789

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 86   ttattttcagctccacgcag 105
            ||||||||||||||||||||
Sbjct: 1373 ttattttcagctccacgcag 1354

>emb|CR936947.2| Medicago truncatula chromosome 5 clone mte1-85h10, COMPLETE SEQUENCE
          Length = 136310

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 53     gaagaacgagtttaattttgatat 76
              |||||| |||||||||||||||||
Sbjct: 131309 gaagaatgagtttaattttgatat 131332

>emb|CT573055.2| Medicago truncatula chromosome 5 clone mth2-75o19, COMPLETE SEQUENCE
          Length = 121343

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    gaagaacgagtttaattttgatat 76
             |||||| |||||||||||||||||
Sbjct: 98805 gaagaatgagtttaattttgatat 98782

>gb|AC115846.7| Mus musculus chromosome 1, clone RP24-245O4, complete sequence
          Length = 170731

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 88    attttcagctccacgcagt 106
             |||||||||||||||||||
Sbjct: 88205 attttcagctccacgcagt 88187

>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 39      ccaaattccgtgttgaagaacga 61
               |||||| ||||||||||||||||
Sbjct: 1311383 ccaaataccgtgttgaagaacga 1311405

>gb|AC091483.6| Trypanosoma brucei chromosome 3 clone RPCI93-48K5, complete sequence
          Length = 161296

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 39    ccaaattccgtgttgaagaacga 61
             |||||| ||||||||||||||||
Sbjct: 37095 ccaaataccgtgttgaagaacga 37117

>gb|AY691240.1| Clostridium scindens 60 kDa chaperonin (cpn60) gene, partial cds
          Length = 552

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 97  tccacgcagtttgtttaca 115
           |||||||||||||||||||
Sbjct: 531 tccacgcagtttgtttaca 513

>gb|AC140333.2| Mus musculus BAC clone RP24-326A21 from chromosome 10, complete sequence
          Length = 157738

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 1      gaaacacagggagaaaact 19
              |||||||||||||||||||
Sbjct: 118209 gaaacacagggagaaaact 118227

>gb|DQ106100.1| Uncultured bacterium clone ce0_cl55_cn1 60 kDa chaperonin (cpn60)
           gene, partial cds
          Length = 552

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 97  tccacgcagtttgtttaca 115
           |||||||||||||||||||
Sbjct: 531 tccacgcagtttgtttaca 513

>gb|AC155248.2| Mus musculus BAC clone RP24-243O10 from chromosome 13, complete
             sequence
          Length = 181818

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 13    gaaaactggaatatacagt 31
             |||||||||||||||||||
Sbjct: 40012 gaaaactggaatatacagt 40030

>ref|XM_821445.1| Trypanosoma brucei TREU927 clone RPCI93-48K5 UDP-glucose:glycoprotein
            glucosyltransferase (Tb927.3.4630) partial mRNA
          Length = 5028

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 39   ccaaattccgtgttgaagaacga 61
            |||||| ||||||||||||||||
Sbjct: 2190 ccaaataccgtgttgaagaacga 2168

>gb|AC124507.4| Mus musculus BAC clone RP23-430B14 from chromosome 7, complete sequence
          Length = 204278

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 82    tacattattttcagctcca 100
             |||||||||||||||||||
Sbjct: 11932 tacattattttcagctcca 11914

>gb|AC122417.4| Mus musculus BAC clone RP24-159C12 from chromosome 7, complete sequence
          Length = 188555

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 82     tacattattttcagctcca 100
              |||||||||||||||||||
Sbjct: 101853 tacattattttcagctcca 101835

>gb|BC041267.1| Xenopus laevis actin related protein 2/3 complex, subunit 1A, 41kDa,
            mRNA (cDNA clone MGC:52839 IMAGE:4885217), complete cds
          Length = 1795

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 82   tacattattttcagctcca 100
            |||||||||||||||||||
Sbjct: 1511 tacattattttcagctcca 1529

>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence
          Length = 243006

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 1      gaaacacagggagaaaact 19
              |||||||||||||||||||
Sbjct: 228906 gaaacacagggagaaaact 228888

>gb|AF523114.1| Anadenanthera colubrina chloroplast trnK gene, intron sequence; and
           maturase-like sequence
          Length = 2261

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 48  gtgttgaagaacgagttta 66
           |||||||||||||||||||
Sbjct: 416 gtgttgaagaacgagttta 434

>emb|AL450472.14| Human DNA sequence from clone RP11-265D19 on chromosome X Contains the 5'
              end of the ZNF75 gene for zinc finger protein 75 (D8C6),
              gene FLJ23614, two novel genes, the 5' end of a novel gene,
              a novel pseudogene and four CpG islands, complete sequence
          Length = 177877

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 77     aagggtacattattttcag 95
              |||||||||||||||||||
Sbjct: 131463 aagggtacattattttcag 131481

>gb|AF465685.1| Ciona intestinalis alpha-tubulin 2 (TUBA2) gene, partial cds
          Length = 2156

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 69   tttgatataagggtacattattt 91
            |||||||||| ||||||||||||
Sbjct: 1607 tttgatataatggtacattattt 1585

>emb|AL031621.1|CEF28H6 Caenorhabditis elegans Cosmid F28H6, complete sequence
          Length = 37975

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 58    acgagtttaattttgatat 76
             |||||||||||||||||||
Sbjct: 13838 acgagtttaattttgatat 13820

>gb|AE001437.1| Clostridium acetobutylicum ATCC 824, complete genome
          Length = 3940880

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 25      atacagtagttaagccaaa 43
               |||||||||||||||||||
Sbjct: 1685454 atacagtagttaagccaaa 1685472

>dbj|AP006377.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT38A19, TM0221,
             complete sequence
          Length = 110900

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 1     gaaacacagggagaaaact 19
             |||||||||||||||||||
Sbjct: 84471 gaaacacagggagaaaact 84489


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,539,925
Number of Sequences: 3902068
Number of extensions: 1539925
Number of successful extensions: 111375
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111290
Number of HSP's gapped (non-prelim): 85
length of query: 152
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 131
effective length of database: 17,151,101,840
effective search space: 2246794341040
effective search space used: 2246794341040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)