ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32b03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC153515.8| Mus musculus 10 BAC RP23-425D13 (Roswell Park Can... 44 0.47
2gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 44 0.47
3ref|NM_192792.1| Oryza sativa (japonica cultivar-group), predic... 42 1.9
4gb|AY204469.1| Myxococcus xanthus clone C1213 putative histidine... 42 1.9
5gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 42 1.9
6gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete ge... 42 1.9
7gb|AC154048.1| Drosophila melanogaster clone BACR29A04, complete... 40 7.3
8gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete... 40 7.3
9gb|AC102297.12| Mus musculus chromosome 1, clone RP24-392K18, co... 40 7.3
10ref|NM_188070.1| Oryza sativa (japonica cultivar-group), Ozsa849... 40 7.3
11gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 7.3
12gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 7.3
13ref|XM_418084.1| PREDICTED: Gallus gallus similar to microtubule... 40 7.3
14ref|XM_461735.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 7.3
15ref|XM_959170.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.3
16gb|AC135121.4| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
17ref|XM_329955.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.3
18gb|AC158925.4| Mus musculus chromosome 1, clone RP23-22I7, compl... 40 7.3
19ref|XM_533813.2| PREDICTED: Canis familiaris similar to dedicato... 40 7.3
20ref|XM_757300.1| Ustilago maydis 521 hypothetical protein (UM062... 40 7.3
21ref|XM_568220.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 7.3
22gb|AC123515.2| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
23emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 40 7.3
24emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 7.3
25emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete ... 40 7.3
26gb|AE005831.1| Caulobacter crescentus CB15 section 157 of 359 of... 40 7.3
27gb|AC092857.17| Rattus norvegicus clone rp32-362k5, complete seq... 40 7.3
28gb|CP000133.1| Rhizobium etli CFN 42, complete genome 40 7.3
29ref|NM_167302.1| Drosophila melanogaster CG1841-RB, transcript v... 40 7.3
30ref|NM_132515.2| Drosophila melanogaster CG1841-RA, transcript v... 40 7.3
31gb|AY069304.1| Drosophila melanogaster HL07962 full length cDNA 40 7.3
32emb|BX935492.2| Gallus gallus finished cDNA, clone ChEST129a5 40 7.3
33emb|BX932781.2| Gallus gallus finished cDNA, clone ChEST475c2 40 7.3
34emb|AL115777.1|CNS01CO9 Botrytis cinerea strain T4 cDNA library 40 7.3
35emb|AL114476.1|CNS01BO4 Botrytis cinerea strain T4 cDNA library 40 7.3
36emb|AL112261.1|CNS019YL Botrytis cinerea strain T4 cDNA library 40 7.3
37emb|AL111546.1|CNS019EQ Botrytis cinerea strain T4 cDNA library 40 7.3
38dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
39dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
40dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
41dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
42gb|AY212929.1| Human herpesvirus 5 isolate 2J UL136 protein gene... 40 7.3
43gb|AE004740.1| Pseudomonas aeruginosa PAO1, section 301 of 529 o... 40 7.3
44dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
45dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
46dbj|AP005673.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.3
47dbj|AK067786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.3
48emb|BX248120.7| Zebrafish DNA sequence from clone CH211-160J6 in... 40 7.3
49dbj|AB074880.1| Chlamydomonas reinhardtii PTB1 mRNA for putative... 40 7.3
50gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 ... 40 7.3
51gb|AY648055.1| Rubrivivax gelatinosus CoxB (coxB) gene, partial ... 40 7.3
52gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.3
53emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4,... 40 7.3
54gb|DQ229946.1| Human herpesvirus 5 isolate 2J UL/b' region 40 7.3
55gb|J03190.1|RATAVS Rat 5-aminolevulinate synthase mRNA, complete... 40 7.3 
>gb|AC153515.8| Mus musculus 10 BAC RP23-425D13 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 209920

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 237   gaggctgagagtgggcccgtcc 258
             ||||||||||||||||||||||
Sbjct: 48177 gaggctgagagtgggcccgtcc 48198
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                             
Query: 411     tgcaccggcaccagcacctccgccggcagc 440
               |||||||||||| ||||||||| |||||||
Sbjct: 2104784 tgcaccggcaccggcacctccggcggcagc 2104813
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>ref|NM_192792.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 207

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 189 cagcgacgcgccagcccatatcacc 213
           ||||||||||||| |||||||||||
Sbjct: 127 cagcgacgcgccatcccatatcacc 151
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>gb|AY204469.1| Myxococcus xanthus clone C1213 putative histidine kinase, sensor
            protein, MsrA-like protein, adventurous gliding motility
            protein R (aglR), adventurous gliding motility protein S
            (aglS), putative membrane protein, histidine kinase,
            hypothetical proteins, and NH3-dependent NAD+ synthetase
            genes, complete cds
          Length = 20250

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 215  ccgcggaggagcaggcggcct 235
            |||||||||||||||||||||
Sbjct: 1169 ccgcggaggagcaggcggcct 1189
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 214     accgcggaggagcaggcggcc 234
               |||||||||||||||||||||
Sbjct: 4307987 accgcggaggagcaggcggcc 4307967



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 487    cctccgccggcggcaccgcc 506
              ||||||||||||||||||||
Sbjct: 221123 cctccgccggcggcaccgcc 221104
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>gb|AE008692.1| Zymomonas mobilis subsp. mobilis ZM4, complete genome
          Length = 2056416

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 409    cctgcaccggcaccagcacct 429
              |||||||||||||||||||||
Sbjct: 474836 cctgcaccggcaccagcacct 474856
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>gb|AC154048.1| Drosophila melanogaster clone BACR29A04, complete sequence
          Length = 159930

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 418   gcaccagcacctccgccggcagccccgc 445
             |||||||||||||| ||| |||||||||
Sbjct: 45120 gcaccagcacctccaccgccagccccgc 45147
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>gb|AC154042.1| Drosophila melanogaster clone BACR46E23, complete sequence
          Length = 181148

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 418   gcaccagcacctccgccggcagccccgc 445
             |||||||||||||| ||| |||||||||
Sbjct: 12221 gcaccagcacctccaccgccagccccgc 12194
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>gb|AC102297.12| Mus musculus chromosome 1, clone RP24-392K18, complete sequence
          Length = 167248

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 406    ccacctgcaccggcaccagcacct 429
              ||||||||||| ||||||||||||
Sbjct: 151330 ccacctgcaccagcaccagcacct 151307
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>ref|NM_188070.1| Oryza sativa (japonica cultivar-group), Ozsa8490 predicted mRNA
          Length = 768

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 419 caccagcacctccgccggcagccccgcc 446
           |||||||||| |||||||||||| ||||
Sbjct: 60  caccagcaccgccgccggcagccgcgcc 33
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>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete
              sequence
          Length = 906719

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 412    gcaccggcaccagcacctcc 431
              ||||||||||||||||||||
Sbjct: 276065 gcaccggcaccagcacctcc 276046
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    cctgcaccggcaccagcacc 428
              ||||||||||||||||||||
Sbjct: 169047 cctgcaccggcaccagcacc 169066
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>ref|XM_418084.1| PREDICTED: Gallus gallus similar to microtubule-associated protein
           tau; Tau microtubule-associated protein (LOC419962),
           mRNA
          Length = 2282

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 206 atatcaccaccgcggaggagcagg 229
           |||||||||||| |||||||||||
Sbjct: 37  atatcaccaccgtggaggagcagg 60
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>ref|XM_461735.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G04994g)
           partial mRNA
          Length = 1062

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 407 cacctgcaccggcaccagcacctc 430
           |||| |||||||||||||||||||
Sbjct: 733 caccggcaccggcaccagcacctc 710
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>ref|XM_959170.1| Neurospora crassa OR74A hypothetical protein (NCU02768.1) partial
            mRNA
          Length = 5016

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  actggtgatgttgctgctgc 340
            ||||||||||||||||||||
Sbjct: 3271 actggtgatgttgctgctgc 3252
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>gb|AC135121.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0089M05, complete sequence
          Length = 131308

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 488   ctccgccggcggcaccgccg 507
             ||||||||||||||||||||
Sbjct: 59205 ctccgccggcggcaccgccg 59186
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>ref|XM_329955.1| Neurospora crassa OR74A hypothetical protein (NCU02768.1) partial
            mRNA
          Length = 5016

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 321  actggtgatgttgctgctgc 340
            ||||||||||||||||||||
Sbjct: 3271 actggtgatgttgctgctgc 3252
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>gb|AC158925.4| Mus musculus chromosome 1, clone RP23-22I7, complete sequence
          Length = 181897

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 406   ccacctgcaccggcaccagcacct 429
             ||||||||||| ||||||||||||
Sbjct: 92860 ccacctgcaccagcaccagcacct 92883
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>ref|XM_533813.2| PREDICTED: Canis familiaris similar to dedicator of cytokinesis 3
            (LOC476610), mRNA
          Length = 6093

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 326  tgatgttgctgctgcccaca 345
            ||||||||||||||||||||
Sbjct: 5336 tgatgttgctgctgcccaca 5355
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>ref|XM_757300.1| Ustilago maydis 521 hypothetical protein (UM06246.1) partial mRNA
          Length = 4662

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 403  gctccacctgcaccggcacc 422
            ||||||||||||||||||||
Sbjct: 3976 gctccacctgcaccggcacc 3957
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>ref|XM_568220.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
           (CNL04570) partial mRNA
          Length = 1708

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 412 gcaccggcaccagcacctcc 431
           ||||||||||||||||||||
Sbjct: 400 gcaccggcaccagcacctcc 419
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>gb|AC123515.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0033E08, complete sequence
          Length = 149241

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   caccaccgcggaggagcagg 229
             ||||||||||||||||||||
Sbjct: 30382 caccaccgcggaggagcagg 30401
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>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
              hansenii
          Length = 2051428

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 407    cacctgcaccggcaccagcacctc 430
              |||| |||||||||||||||||||
Sbjct: 388419 caccggcaccggcaccagcacctc 388396
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>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 414    accggcaccagcacctccgccggcagcc 441
              ||||||| ||||||||||| ||||||||
Sbjct: 270664 accggcagcagcacctccggcggcagcc 270691
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>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29
          Length = 290850

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 421    ccagcacctccgccggcagc 440
              ||||||||||||||||||||
Sbjct: 275867 ccagcacctccgccggcagc 275848
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>gb|AE005831.1| Caulobacter crescentus CB15 section 157 of 359 of the complete genome
          Length = 13304

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 425   cacctccgccggcagccccgccaa 448
             |||||| |||||||||||||||||
Sbjct: 10905 cacctcggccggcagccccgccaa 10928
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>gb|AC092857.17| Rattus norvegicus clone rp32-362k5, complete sequence
          Length = 143406

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    ctggtgatgttgctgctgcc 341
              ||||||||||||||||||||
Sbjct: 106194 ctggtgatgttgctgctgcc 106175
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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 491     cgccggcggcaccgccgatg 510
               ||||||||||||||||||||
Sbjct: 1003814 cgccggcggcaccgccgatg 1003795
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>ref|NM_167302.1| Drosophila melanogaster CG1841-RB, transcript variant B (CG1841),
           mRNA
          Length = 3261

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 418 gcaccagcacctccgccggcagccccgc 445
           |||||||||||||| ||| |||||||||
Sbjct: 576 gcaccagcacctccaccgccagccccgc 549
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>ref|NM_132515.2| Drosophila melanogaster CG1841-RA, transcript variant A (CG1841),
           mRNA
          Length = 3012

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 418 gcaccagcacctccgccggcagccccgc 445
           |||||||||||||| ||| |||||||||
Sbjct: 327 gcaccagcacctccaccgccagccccgc 300
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>gb|AY069304.1| Drosophila melanogaster HL07962 full length cDNA
          Length = 3023

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 418 gcaccagcacctccgccggcagccccgc 445
           |||||||||||||| ||| |||||||||
Sbjct: 323 gcaccagcacctccaccgccagccccgc 296
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>emb|BX935492.2| Gallus gallus finished cDNA, clone ChEST129a5
          Length = 886

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 206 atatcaccaccgcggaggagcagg 229
           |||||||||||| |||||||||||
Sbjct: 99  atatcaccaccgtggaggagcagg 122
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>emb|BX932781.2| Gallus gallus finished cDNA, clone ChEST475c2
          Length = 551

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 206 atatcaccaccgcggaggagcagg 229
           |||||||||||| |||||||||||
Sbjct: 47  atatcaccaccgtggaggagcagg 70
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>emb|AL115777.1|CNS01CO9 Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 405 tccacctgcaccggcaccagcacc 428
           |||||| |||||||||||||||||
Sbjct: 173 tccaccagcaccggcaccagcacc 150
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>emb|AL114476.1|CNS01BO4 Botrytis cinerea strain T4 cDNA library
          Length = 660

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 408 acctgcaccggcaccagcacctcc 431
           ||||||||||||||||||| ||||
Sbjct: 315 acctgcaccggcaccagcagctcc 292
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>emb|AL112261.1|CNS019YL Botrytis cinerea strain T4 cDNA library
          Length = 780

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 408 acctgcaccggcaccagcacctcc 431
           ||||||||||||||||||| ||||
Sbjct: 287 acctgcaccggcaccagcagctcc 264
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>emb|AL111546.1|CNS019EQ Botrytis cinerea strain T4 cDNA library
          Length = 780

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 408 acctgcaccggcaccagcacctcc 431
           ||||||||||||||||||| ||||
Sbjct: 86  acctgcaccggcaccagcagctcc 63
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 210      caccaccgcggaggagcagg 229
                ||||||||||||||||||||
Sbjct: 26095675 caccaccgcggaggagcagg 26095656
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 488      ctccgccggcggcaccgccg 507
                ||||||||||||||||||||
Sbjct: 16891459 ctccgccggcggcaccgccg 16891440



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 210     caccaccgcggaggagcagg 229
               ||||||||||||||||||||
Sbjct: 5694825 caccaccgcggaggagcagg 5694844
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 477      cgcaccactgcctccgccggcggc 500
                ||||||||||||||| ||||||||
Sbjct: 10235315 cgcaccactgcctcccccggcggc 10235292



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 477      cgcaccactgcctccgccggcggc 500
                ||||||||||||||| ||||||||
Sbjct: 10226694 cgcaccactgcctcccccggcggc 10226671
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 419     caccagcacctccgccggcagccccgcc 446
               |||||||||| |||||||||||| ||||
Sbjct: 9423669 caccagcaccgccgccggcagccgcgcc 9423642
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>gb|AY212929.1| Human herpesvirus 5 isolate 2J UL136 protein gene, complete cds
          Length = 723

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 caccagcacctccgccggca 438
           ||||||||||||||||||||
Sbjct: 574 caccagcacctccgccggca 555
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>gb|AE004740.1| Pseudomonas aeruginosa PAO1, section 301 of 529 of the complete
            genome
          Length = 10965

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 419  caccagcacctccgccggca 438
            ||||||||||||||||||||
Sbjct: 8063 caccagcacctccgccggca 8082
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>dbj|AP001081.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0693B08
          Length = 140812

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 419   caccagcacctccgccggcagccccgcc 446
             |||||||||| |||||||||||| ||||
Sbjct: 93996 caccagcaccgccgccggcagccgcgcc 93969
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>dbj|AP005880.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0032G22
          Length = 127365

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 477   cgcaccactgcctccgccggcggc 500
             ||||||||||||||| ||||||||
Sbjct: 94052 cgcaccactgcctcccccggcggc 94029



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 477   cgcaccactgcctccgccggcggc 500
             ||||||||||||||| ||||||||
Sbjct: 85431 cgcaccactgcctcccccggcggc 85408
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>dbj|AP005673.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1029H08
          Length = 137050

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 477   cgcaccactgcctccgccggcggc 500
             ||||||||||||||| ||||||||
Sbjct: 57234 cgcaccactgcctcccccggcggc 57211



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 477   cgcaccactgcctccgccggcggc 500
             ||||||||||||||| ||||||||
Sbjct: 48613 cgcaccactgcctcccccggcggc 48590
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>dbj|AK067786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F01, full
           insert sequence
          Length = 1613

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 419 caccagcacctccgccggcagccccgcc 446
           |||||||||| |||||||||||| ||||
Sbjct: 139 caccagcaccgccgccggcagccgcgcc 112
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>emb|BX248120.7| Zebrafish DNA sequence from clone CH211-160J6 in linkage group 18,
             complete sequence
          Length = 181815

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 402   agctccacctgcaccggcaccagcacct 429
             ||||||||||||||| ||||| ||||||
Sbjct: 51103 agctccacctgcacctgcacccgcacct 51130
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>dbj|AB074880.1| Chlamydomonas reinhardtii PTB1 mRNA for putative Pi-transporter
            homologue B1, complete cds
          Length = 6032

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 409  cctgcaccggcaccagcacc 428
            ||||||||||||||||||||
Sbjct: 3165 cctgcaccggcaccagcacc 3146
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>gb|AE003487.2| Drosophila melanogaster chromosome X, section 39 of 74 of the complete
             sequence
          Length = 308317

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 418   gcaccagcacctccgccggcagccccgc 445
             |||||||||||||| ||| |||||||||
Sbjct: 15759 gcaccagcacctccaccgccagccccgc 15732
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>gb|AY648055.1| Rubrivivax gelatinosus CoxB (coxB) gene, partial cds; CoxA (coxA),
            Cox11 (cox11), CoxC (coxC), SurF1 (surF1), Sco1 (sco1),
            and HemJ (hemJ) genes, complete cds; and HemI gene,
            partial cds
          Length = 7716

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 491  cgccggcggcaccgccgatg 510
            ||||||||||||||||||||
Sbjct: 7672 cgccggcggcaccgccgatg 7653
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 488      ctccgccggcggcaccgccg 507
                ||||||||||||||||||||
Sbjct: 16985230 ctccgccggcggcaccgccg 16985211



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 210     caccaccgcggaggagcagg 229
               ||||||||||||||||||||
Sbjct: 5761302 caccaccgcggaggagcagg 5761321
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>emb|AL662958.3|OSJN00156 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019D11,
              complete sequence
          Length = 163039

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 210    caccaccgcggaggagcagg 229
              ||||||||||||||||||||
Sbjct: 130002 caccaccgcggaggagcagg 129983
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>gb|DQ229946.1| Human herpesvirus 5 isolate 2J UL/b' region
          Length = 18067

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   caccagcacctccgccggca 438
             ||||||||||||||||||||
Sbjct: 11989 caccagcacctccgccggca 12008
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>gb|J03190.1|RATAVS Rat 5-aminolevulinate synthase mRNA, complete cds
          Length = 2052

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 400 ctagctccacctgcaccggcacca 423
           |||| |||||||||||||||||||
Sbjct: 865 ctagttccacctgcaccggcacca 842


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,585,087
Number of Sequences: 3902068
Number of extensions: 3585087
Number of successful extensions: 78345
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77343
Number of HSP's gapped (non-prelim): 1002
length of query: 540
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 517
effective length of database: 17,143,297,704
effective search space: 8863084912968
effective search space used: 8863084912968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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