ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart32b02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC113249.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0041L19, complete sequence Length = 155086 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 361 agtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatggcct 420 |||| |||||||||||||||||||||||||| ||||| || |||||| |||||||||| Sbjct: 88254 agtcgacgaacgactggatgtactcggcgtcgacgcgcgccacggcggcgcggatggcgc 88313 Query: 421 ccaccacgccgcggtagctc 440 | |||||| ||||||||||| Sbjct: 88314 cgaccacgtcgcggtagctc 88333 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 167 cggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaacgccgacggcgg 226 ||||| || |||||| || |||||| ||||||||||||||| || || || | |||||| Sbjct: 88060 cggcacgaggatcatcagcccctcgatgggcaggtccggcgacaggacggcggccggcgg 88119 Query: 227 cccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtccacctccaggtc 286 ||||| ||||| ||| |||| || |||||| || || || | |||||||||||||||||| Sbjct: 88120 cccggtgccgaggtccatctcgtggaacctgaacccgagccagctgtccacctccaggtc 88179 Query: 287 cgggca 292 |||||| Sbjct: 88180 cgggca 88185 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 361 agtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatggcct 420 |||| ||||||||||||||||||||| |||| ||||| || |||||| |||||||||| Sbjct: 123849 agtcgacgaacgactggatgtactcgccgtcgacgcgcgccacggcggcgcggatggcgc 123790 Query: 421 ccaccacgccgcggtagctc 440 | |||||| ||||||||||| Sbjct: 123789 cgaccacgtcgcggtagctc 123770 Score = 75.8 bits (38), Expect = 1e-10 Identities = 104/126 (82%) Strand = Plus / Minus Query: 167 cggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaacgccgacggcgg 226 ||||| || |||||| || |||||| ||||||||||||||| || | || | |||||| Sbjct: 124043 cggcacgaggatcatcagcccctcgatgggcaggtccggcgacagcacggcggccggcgg 123984 Query: 227 cccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtccacctccaggtc 286 ||||| ||||| ||| |||| || |||||| || || || | |||||||||||||||||| Sbjct: 123983 cccggtgccgaggtccatctcgtggaacctgaacccgagccagctgtccacctccaggtc 123924 Query: 287 cgggca 292 |||||| Sbjct: 123923 cgggca 123918
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 361 agtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatggcct 420 |||| |||||||||||||||||||||||||| ||||| || |||||| |||||||||| Sbjct: 24611352 agtcgacgaacgactggatgtactcggcgtcgacgcgcgccacggcggcgcggatggcgc 24611411 Query: 421 ccaccacgccgcggtagctc 440 | |||||| ||||||||||| Sbjct: 24611412 cgaccacgtcgcggtagctc 24611431 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 167 cggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaacgccgacggcgg 226 ||||| || |||||| || |||||| ||||||||||||||| || || || | |||||| Sbjct: 24611158 cggcacgaggatcatcagcccctcgatgggcaggtccggcgacaggacggcggccggcgg 24611217 Query: 227 cccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtccacctccaggtc 286 ||||| ||||| ||| |||| || |||||| || || || | |||||||||||||||||| Sbjct: 24611218 cccggtgccgaggtccatctcgtggaacctgaacccgagccagctgtccacctccaggtc 24611277 Query: 287 cgggca 292 |||||| Sbjct: 24611278 cgggca 24611283 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 361 agtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatggcct 420 |||| ||||||||||||||||||||| |||| ||||| || |||||| |||||||||| Sbjct: 24646947 agtcgacgaacgactggatgtactcgccgtcgacgcgcgccacggcggcgcggatggcgc 24646888 Query: 421 ccaccacgccgcggtagctc 440 | |||||| ||||||||||| Sbjct: 24646887 cgaccacgtcgcggtagctc 24646868 Score = 75.8 bits (38), Expect = 1e-10 Identities = 104/126 (82%) Strand = Plus / Minus Query: 167 cggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaacgccgacggcgg 226 ||||| || |||||| || |||||| ||||||||||||||| || | || | |||||| Sbjct: 24647141 cggcacgaggatcatcagcccctcgatgggcaggtccggcgacagcacggcggccggcgg 24647082 Query: 227 cccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtccacctccaggtc 286 ||||| ||||| ||| |||| || |||||| || || || | |||||||||||||||||| Sbjct: 24647081 cccggtgccgaggtccatctcgtggaacctgaacccgagccagctgtccacctccaggtc 24647022 Query: 287 cgggca 292 |||||| Sbjct: 24647021 cgggca 24647016 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 308 gaccgccgccgtggccgggagctcctcc 335 ||||||||||||||||| || ||||||| Sbjct: 3259294 gaccgccgccgtggccgcgatctcctcc 3259321
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 87.7 bits (44), Expect = 3e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 361 agtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatggcct 420 |||| |||||||||||||||||||||||||| ||||| || |||||| |||||||||| Sbjct: 24923022 agtcgacgaacgactggatgtactcggcgtcgacgcgcgccacggcggcgcggatggcgc 24923081 Query: 421 ccaccacgccgcggtagctc 440 | |||||| ||||||||||| Sbjct: 24923082 cgaccacgtcgcggtagctc 24923101 Score = 83.8 bits (42), Expect = 5e-13 Identities = 105/126 (83%) Strand = Plus / Plus Query: 167 cggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaacgccgacggcgg 226 ||||| || |||||| || |||||| ||||||||||||||| || || || | |||||| Sbjct: 24922828 cggcacgaggatcatcagcccctcgatgggcaggtccggcgacaggacggcggccggcgg 24922887 Query: 227 cccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtccacctccaggtc 286 ||||| ||||| ||| |||| || |||||| || || || | |||||||||||||||||| Sbjct: 24922888 cccggtgccgaggtccatctcgtggaacctgaacccgagccagctgtccacctccaggtc 24922947 Query: 287 cgggca 292 |||||| Sbjct: 24922948 cgggca 24922953 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 361 agtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatggcct 420 |||| ||||||||||||||||||||| |||| ||||| || |||||| |||||||||| Sbjct: 24958617 agtcgacgaacgactggatgtactcgccgtcgacgcgcgccacggcggcgcggatggcgc 24958558 Query: 421 ccaccacgccgcggtagctc 440 | |||||| ||||||||||| Sbjct: 24958557 cgaccacgtcgcggtagctc 24958538 Score = 75.8 bits (38), Expect = 1e-10 Identities = 104/126 (82%) Strand = Plus / Minus Query: 167 cggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaacgccgacggcgg 226 ||||| || |||||| || |||||| ||||||||||||||| || | || | |||||| Sbjct: 24958811 cggcacgaggatcatcagcccctcgatgggcaggtccggcgacagcacggcggccggcgg 24958752 Query: 227 cccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtccacctccaggtc 286 ||||| ||||| ||| |||| || |||||| || || || | |||||||||||||||||| Sbjct: 24958751 cccggtgccgaggtccatctcgtggaacctgaacccgagccagctgtccacctccaggtc 24958692 Query: 287 cgggca 292 |||||| Sbjct: 24958691 cgggca 24958686 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 308 gaccgccgccgtggccgggagctcctcc 335 ||||||||||||||||| || ||||||| Sbjct: 3267999 gaccgccgccgtggccgcgatctcctcc 3268026
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 194 gggcaggtccggcgtcacgaacgccgacggcggcccggcgccgaagtcaatctggttgaa 253 |||||||||||||| || |||||||| ||||| |||| ||||| ||| ||||||| ||| Sbjct: 4474475 gggcaggtccggcggcaggaacgccgccggcgagccggtgccgaggtccatctggtggaa 4474534 Query: 254 cctaaaacccaggctgctgtccacctccaggtccgggcagaacattgtgcc 304 ||| || || || | ||| |||||||||||||||||||| ||||| ||||| Sbjct: 4474535 cctgaacccgagccagctatccacctccaggtccgggcacaacatcgtgcc 4474585 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 356 gccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggat 415 ||||||||| ||||||||||||||||||||| |||| || | || |||||||||||||| Sbjct: 4474646 gccgaagtcgacgaacgactggatgtactcgccgtcgaccctcgccacggcgtcgcggat 4474705 Query: 416 ggc 418 ||| Sbjct: 4474706 ggc 4474708 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 tgccgttgaccgccgccgtggccg 324 |||||||||||||||||| ||||| Sbjct: 34504516 tgccgttgaccgccgccggggccg 34504539 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggca 292 |||||||||||||| ||||||||| Sbjct: 26918545 gctgtccacctccatgtccgggca 26918522
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 194 gggcaggtccggcgtcacgaacgccgacggcggcccggcgccgaagtcaatctggttgaa 253 |||||||||||||| || |||||||| ||||| |||| ||||| ||| ||||||| ||| Sbjct: 4474590 gggcaggtccggcggcaggaacgccgccggcgagccggtgccgaggtccatctggtggaa 4474649 Query: 254 cctaaaacccaggctgctgtccacctccaggtccgggcagaacattgtgcc 304 ||| || || || | ||| |||||||||||||||||||| ||||| ||||| Sbjct: 4474650 cctgaacccgagccagctatccacctccaggtccgggcacaacatcgtgcc 4474700 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 356 gccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggat 415 ||||||||| ||||||||||||||||||||| |||| || | || |||||||||||||| Sbjct: 4474761 gccgaagtcgacgaacgactggatgtactcgccgtcgaccctcgccacggcgtcgcggat 4474820 Query: 416 ggc 418 ||| Sbjct: 4474821 ggc 4474823 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 tgccgttgaccgccgccgtggccg 324 |||||||||||||||||| ||||| Sbjct: 34594588 tgccgttgaccgccgccggggccg 34594611 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggca 292 |||||||||||||| ||||||||| Sbjct: 27009868 gctgtccacctccatgtccgggca 27009845
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0042J17, complete sequence Length = 171442 Score = 85.7 bits (43), Expect = 1e-13 Identities = 94/111 (84%) Strand = Plus / Plus Query: 194 gggcaggtccggcgtcacgaacgccgacggcggcccggcgccgaagtcaatctggttgaa 253 |||||||||||||| || |||||||| ||||| |||| ||||| ||| ||||||| ||| Sbjct: 79767 gggcaggtccggcggcaggaacgccgccggcgagccggtgccgaggtccatctggtggaa 79826 Query: 254 cctaaaacccaggctgctgtccacctccaggtccgggcagaacattgtgcc 304 ||| || || || | ||| |||||||||||||||||||| ||||| ||||| Sbjct: 79827 cctgaacccgagccagctatccacctccaggtccgggcacaacatcgtgcc 79877 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 356 gccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggat 415 ||||||||| ||||||||||||||||||||| |||| || | || |||||||||||||| Sbjct: 79938 gccgaagtcgacgaacgactggatgtactcgccgtcgaccctcgccacggcgtcgcggat 79997 Query: 416 ggc 418 ||| Sbjct: 79998 ggc 80000
>dbj|AK061327.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-H12, full insert sequence Length = 1584 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 361 agtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatggcct 420 |||| ||||||||||||||||||||| |||| ||||| || |||||| |||||||||| Sbjct: 1075 agtcgacgaacgactggatgtactcgccgtcgacgcgcgccacggcggcgcggatggcgc 1016 Query: 421 ccaccacgccgcggtagctc 440 | |||||| ||||||||||| Sbjct: 1015 cgaccacgtcgcggtagctc 996 Score = 75.8 bits (38), Expect = 1e-10 Identities = 104/126 (82%) Strand = Plus / Minus Query: 167 cggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaacgccgacggcgg 226 ||||| || |||||| || |||||| ||||||||||||||| || | || | |||||| Sbjct: 1269 cggcacgaggatcatcagcccctcgatgggcaggtccggcgacagcacggcggccggcgg 1210 Query: 227 cccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtccacctccaggtc 286 ||||| ||||| ||| |||| || |||||| || || || | |||||||||||||||||| Sbjct: 1209 cccggtgccgaggtccatctcgtggaacctgaacccgagccagctgtccacctccaggtc 1150 Query: 287 cgggca 292 |||||| Sbjct: 1149 cgggca 1144
>dbj|AK108939.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-153-B05, full insert sequence Length = 1965 Score = 77.8 bits (39), Expect = 3e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 194 gggcaggtccggcgtcacgaacgccgacggcggcccggcgccgaagtcaatctggttgaa 253 |||||||||||||| || |||||||| ||||| |||| ||||| ||| ||||||| ||| Sbjct: 1246 gggcaggtccggcggcaggaacgccgccggcgagccggtgccgaggtccatctggtggaa 1187 Query: 254 cctaaaacccaggctgctgtccacctccaggtccgggcagaacattgtgcc 304 ||| || || || | ||| |||||||||||||| ||||| ||||| ||||| Sbjct: 1186 cctgaacccgagccagctatccacctccaggtctgggcacaacatcgtgcc 1136 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Minus Query: 356 gccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggat 415 ||||||||| ||||||||||||||||||||| |||| || | || |||||||||||||| Sbjct: 1075 gccgaagtcgacgaacgactggatgtactcgccgtcgaccctcgccacggcgtcgcggat 1016 Query: 416 ggc 418 ||| Sbjct: 1015 ggc 1013
>dbj|AK066965.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013092H19, full insert sequence Length = 996 Score = 67.9 bits (34), Expect = 3e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 156 gccgtgcacgacggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaac 215 |||| ||||||||||| |||||| | | |||||| |||||||||||||| || |||| Sbjct: 826 gccgcgcacgacggcacgaagatgagcatcccctcgacgggcaggtccggcggcaggaac 767 Query: 216 gccgacggcggcccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtcc 275 || ||||||| || ||||||||| | | || |||||| || || || | ||||||| Sbjct: 766 gcgcacggcgggccacggccgaagtcgaggtcgtggaacctgaaccctagccagctgtcc 707 Query: 276 acctccaggtccgggcagaaca 297 |||||||||||||||||||||| Sbjct: 706 acctccaggtccgggcagaaca 685 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 357 ccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatg 416 |||||||||||||||||||||||||||| |||| ||||| || ||||| ||||||||| Sbjct: 631 ccgaagtccacgaacgactggatgtactgctcgtcgacgcgcgccacggcctcgcggatg 572
>dbj|AK060656.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-A04, full insert sequence Length = 1482 Score = 67.9 bits (34), Expect = 3e-08 Identities = 115/142 (80%) Strand = Plus / Minus Query: 156 gccgtgcacgacggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaac 215 |||| ||||||||||| |||||| | | |||||| |||||||||||||| || |||| Sbjct: 1312 gccgcgcacgacggcacgaagatgagcatcccctcgacgggcaggtccggcggcaggaac 1253 Query: 216 gccgacggcggcccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtcc 275 || ||||||| || ||||||||| | | || |||||| || || || | ||||||| Sbjct: 1252 gcgcacggcgggccacggccgaagtcgaggtcgtggaacctgaaccctagccagctgtcc 1193 Query: 276 acctccaggtccgggcagaaca 297 |||||||||||||||||||||| Sbjct: 1192 acctccaggtccgggcagaaca 1171 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 357 ccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatg 416 |||||||||||||||||||||||||||| |||| ||||| || ||||| ||||||||| Sbjct: 1117 ccgaagtccacgaacgactggatgtactgctcgtcgacgcgcgccacggcctcgcggatg 1058
>gb|AC146310.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone B1082A06, complete sequence Length = 135774 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 356 gccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggat 415 |||||||||||||||||||||||||||| |||| ||||| || |||||||||||||| Sbjct: 119853 gccgaagtccacgaacgactggatgtaccgctcgtcgacgcgcgccacggcgtcgcggat 119912 Query: 416 g 416 | Sbjct: 119913 g 119913 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 156 gccgtgcacgacggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaac 215 |||| ||||||||||| |||||| | | || ||| |||||| |||||||| || |||| Sbjct: 119659 gccgcgcacgacggcacgaagatgagcaacccgtcgatgggcacgtccggcggcaggaac 119718 Query: 216 gccgacggcggcccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtcc 275 || ||||||||||| |||||||||| | | || |||||| || || | | |||||| Sbjct: 119719 gcgcacggcggcccgccgccgaagtcgaggtcgtggaacctgaaccctatccagctgtcg 119778 Query: 276 acctccaggtccgggcagaac 296 ||||||||||||||||||||| Sbjct: 119779 acctccaggtccgggcagaac 119799
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 356 gccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggat 415 |||||||||||||||||||||||||||| |||| ||||| || |||||||||||||| Sbjct: 11665918 gccgaagtccacgaacgactggatgtaccgctcgtcgacgcgcgccacggcgtcgcggat 11665977 Query: 416 g 416 | Sbjct: 11665978 g 11665978 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 156 gccgtgcacgacggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaac 215 |||| ||||||||||| |||||| | | || ||| |||||| |||||||| || |||| Sbjct: 11665724 gccgcgcacgacggcacgaagatgagcaacccgtcgatgggcacgtccggcggcaggaac 11665783 Query: 216 gccgacggcggcccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtcc 275 || ||||||||||| |||||||||| | | || |||||| || || | | |||||| Sbjct: 11665784 gcgcacggcggcccgccgccgaagtcgaggtcgtggaacctgaaccctatccagctgtcg 11665843 Query: 276 acctccaggtccgggcagaac 296 ||||||||||||||||||||| Sbjct: 11665844 acctccaggtccgggcagaac 11665864 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggcagaaca 297 ||||||||||||||||||||||||||||| Sbjct: 11699614 gctgtccacctccaggtccgggcagaaca 11699586 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 357 ccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatg 416 |||||||| ||||||||||||||||||| |||| ||||| || ||||||| ||||||| Sbjct: 11699532 ccgaagtcgacgaacgactggatgtactgctcgtcgacgcgcgccacggcgttgcggatg 11699473 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggcaga 294 |||||||||||| ||||||||||||| Sbjct: 8891599 gctgtccacctcaaggtccgggcaga 8891574 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ccgccgccgtggccgggagc 329 |||||||||||||||||||| Sbjct: 16104380 ccgccgccgtggccgggagc 16104399
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 356 gccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggat 415 |||||||||||||||||||||||||||| |||| ||||| || |||||||||||||| Sbjct: 11672358 gccgaagtccacgaacgactggatgtaccgctcgtcgacgcgcgccacggcgtcgcggat 11672417 Query: 416 g 416 | Sbjct: 11672418 g 11672418 Score = 65.9 bits (33), Expect = 1e-07 Identities = 114/141 (80%) Strand = Plus / Plus Query: 156 gccgtgcacgacggcaagaagatcatgaggccctcgttgggcaggtccggcgtcacgaac 215 |||| ||||||||||| |||||| | | || ||| |||||| |||||||| || |||| Sbjct: 11672164 gccgcgcacgacggcacgaagatgagcaacccgtcgatgggcacgtccggcggcaggaac 11672223 Query: 216 gccgacggcggcccggcgccgaagtcaatctggttgaacctaaaacccaggctgctgtcc 275 || ||||||||||| |||||||||| | | || |||||| || || | | |||||| Sbjct: 11672224 gcgcacggcggcccgccgccgaagtcgaggtcgtggaacctgaaccctatccagctgtcg 11672283 Query: 276 acctccaggtccgggcagaac 296 ||||||||||||||||||||| Sbjct: 11672284 acctccaggtccgggcagaac 11672304 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggcagaaca 297 ||||||||||||||||||||||||||||| Sbjct: 11706954 gctgtccacctccaggtccgggcagaaca 11706926 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 357 ccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatg 416 |||||||| ||||||||||||||||||| |||| ||||| || ||||||| ||||||| Sbjct: 11706872 ccgaagtcgacgaacgactggatgtactgctcgtcgacgcgcgccacggcgttgcggatg 11706813 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggcaga 294 |||||||||||| ||||||||||||| Sbjct: 8896738 gctgtccacctcaaggtccgggcaga 8896713 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ccgccgccgtggccgggagc 329 |||||||||||||||||||| Sbjct: 16112621 ccgccgccgtggccgggagc 16112640
>ref|NM_196170.1| Oryza sativa (japonica cultivar-group) putative anthranilate N-benzoyltransferase (OSJNBa0032N04.2), mRNA Length = 1305 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggcagaaca 297 ||||||||||||||||||||||||||||| Sbjct: 1110 gctgtccacctccaggtccgggcagaaca 1082 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 357 ccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatg 416 |||||||| ||||||||||||||||||| |||| ||||| || ||||||| ||||||| Sbjct: 1028 ccgaagtcgacgaacgactggatgtactgctcgtcgacgcgcgccacggcgttgcggatg 969
>gb|AC114474.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032N04, from chromosome 10, complete sequence Length = 159445 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggcagaaca 297 ||||||||||||||||||||||||||||| Sbjct: 17675 gctgtccacctccaggtccgggcagaaca 17647 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Minus Query: 357 ccgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggatg 416 |||||||| ||||||||||||||||||| |||| ||||| || ||||||| ||||||| Sbjct: 17593 ccgaagtcgacgaacgactggatgtactgctcgtcgacgcgcgccacggcgttgcggatg 17534
>ref|XM_450191.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1359 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 358 cgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggat 415 ||||||| ||||||||| ||| ||| ||||||| ||||||||||||||||| |||| Sbjct: 1078 cgaagtcgacgaacgaccggaagtaggcggcgtcggcgcgggcgacggcgtcgtggat 1021 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggca 292 |||||||||||||||||| ||||| Sbjct: 1164 gctgtccacctccaggtcggggca 1141
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 358 cgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggat 415 ||||||| ||||||||| ||| ||| ||||||| ||||||||||||||||| |||| Sbjct: 21163385 cgaagtcgacgaacgaccggaagtaggcggcgtcggcgcgggcgacggcgtcgtggat 21163328 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggca 292 |||||||||||||||||| ||||| Sbjct: 21163471 gctgtccacctccaggtcggggca 21163448
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Minus Query: 358 cgaagtccacgaacgactggatgtactcggcgtccacgcgggcgacggcgtcgcggat 415 ||||||| ||||||||| ||| ||| ||||||| ||||||||||||||||| |||| Sbjct: 34142 cgaagtcgacgaacgaccggaagtaggcggcgtcggcgcgggcgacggcgtcgtggat 34085 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggca 292 |||||||||||||||||| ||||| Sbjct: 34228 gctgtccacctccaggtcggggca 34205
>ref|XM_383826.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG03650.1) partial mRNA Length = 1014 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 381 tactcggcgtccacgcgggcgac 403 ||||||||||||||||||||||| Sbjct: 62 tactcggcgtccacgcgggcgac 84
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 211 cgaacgccgacggcggcccggcgccg 236 ||||||||||||||||| |||||||| Sbjct: 87387 cgaacgccgacggcggcgcggcgccg 87412
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 211 cgaacgccgacggcggcccggcgccg 236 ||||||||||||||||| |||||||| Sbjct: 612788 cgaacgccgacggcggcgcggcgccg 612763
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 211 cgaacgccgacggcggcccggcgccg 236 ||||||||||||||||| |||||||| Sbjct: 421325 cgaacgccgacggcggcgcggcgccg 421300
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggcaga 294 |||||||||||| ||||||||||||| Sbjct: 96206 gctgtccacctcaaggtccgggcaga 96181
>gb|AC091749.8| Oryza sativa chromosome 10 BAC OSJNBb0008A05 genomic sequence, complete sequence Length = 150465 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggcaga 294 |||||||||||| ||||||||||||| Sbjct: 146671 gctgtccacctcaaggtccgggcaga 146646
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 388 cgtccacgcgggcgacggcgtcgcg 412 |||| |||||||||||||||||||| Sbjct: 2164429 cgtcgacgcgggcgacggcgtcgcg 2164405
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 394 cgcgggcgacggcgtcgcgga 414 ||||||||||||||||||||| Sbjct: 4285179 cgcgggcgacggcgtcgcgga 4285199
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 388 cgtccacgcgggcgacggcgtcgcg 412 |||| |||||||||||||||||||| Sbjct: 326057 cgtcgacgcgggcgacggcgtcgcg 326033
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 388 cgtccacgcgggcgacggcgtcgcg 412 |||| |||||||||||||||||||| Sbjct: 1998590 cgtcgacgcgggcgacggcgtcgcg 1998614
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 386 ggcgtccacgcgggcgacggcgtcg 410 ||||||||||||||||| ||||||| Sbjct: 2432341 ggcgtccacgcgggcgaaggcgtcg 2432365
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 395 gcgggcgacggcgtcgcggat 415 ||||||||||||||||||||| Sbjct: 2247815 gcgggcgacggcgtcgcggat 2247835 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 ggcggcccggcgccgaagtc 241 |||||||||||||||||||| Sbjct: 2802173 ggcggcccggcgccgaagtc 2802154 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 acgccgacggcggcccggcg 233 |||||||||||||||||||| Sbjct: 608604 acgccgacggcggcccggcg 608623
>gb|AE005059.1| Halobacterium sp. NRC-1 section 90 of 170 of the complete genome Length = 10369 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 202 ccggcgtcacgaacgccgacggcgg 226 ||||| ||||||||||||||||||| Sbjct: 2149 ccggcctcacgaacgccgacggcgg 2173
>ref|NM_185112.1| Oryza sativa (japonica cultivar-group), mRNA Length = 225 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 tgccgttgaccgccgccgtggccg 324 |||||||||||||||||| ||||| Sbjct: 166 tgccgttgaccgccgccggggccg 143
>ref|XM_469315.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1389 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggca 292 |||||||||||||| ||||||||| Sbjct: 1194 gctgtccacctccatgtccgggca 1171
>gb|AC120527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0011J22 map R10571S, complete sequence Length = 154441 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 308 gaccgccgccgtggccgggagctcctcc 335 ||||||||||||||||| || ||||||| Sbjct: 55691 gaccgccgccgtggccgcgatctcctcc 55664
>gb|AC147812.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0073K23 map near R10571S, complete sequence Length = 161073 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 308 gaccgccgccgtggccgggagctcctcc 335 ||||||||||||||||| || ||||||| Sbjct: 154992 gaccgccgccgtggccgcgatctcctcc 154965
>gb|AE009321.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 91 of 187 of the complete sequence Length = 10707 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 cggcgtcacgaacgccgacg 222 |||||||||||||||||||| Sbjct: 1217 cggcgtcacgaacgccgacg 1198
>gb|AE008293.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 97 of 187 of the complete sequence Length = 10676 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 cggcgtcacgaacgccgacg 222 |||||||||||||||||||| Sbjct: 9492 cggcgtcacgaacgccgacg 9511
>gb|AC087412.14| Oryza sativa chromosome 3 BAC OSJNBb0070O09 genomic sequence, complete sequence Length = 149303 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 gctgtccacctccaggtccgggca 292 |||||||||||||| ||||||||| Sbjct: 97545 gctgtccacctccatgtccgggca 97522
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 400 cgacggcgtcgcggatggcctccaccac 427 ||||||||||||||| ||||||| |||| Sbjct: 1725486 cgacggcgtcgcggaaggcctccgccac 1725459
>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence, complete sequence Length = 117505 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 tgccgttgaccgccgccgtggccg 324 |||||||||||||||||| ||||| Sbjct: 21651 tgccgttgaccgccgccggggccg 21628
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 292 agaacattgtgccgttgaccgccg 315 |||||||||||||||| ||||||| Sbjct: 2822977 agaacattgtgccgttaaccgccg 2823000
>emb|BX323601.6| Zebrafish DNA sequence from clone RP71-14P11, complete sequence Length = 207067 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 ttgaccgccgccgtggccgg 325 |||||||||||||||||||| Sbjct: 176228 ttgaccgccgccgtggccgg 176247
>gb|AY257863.1| Oryza sativa (japonica cultivar-group) chromosome 11 genomic sequence Length = 42748 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 308 gaccgccgccgtggccgggagctcctcc 335 ||||||||||||||||| || ||||||| Sbjct: 13508 gaccgccgccgtggccgcgatctcctcc 13535
>gb|AC087549.2|AC087549 Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0039C14, complete sequence Length = 135098 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 ccgccgccgtggccgggagc 329 |||||||||||||||||||| Sbjct: 119485 ccgccgccgtggccgggagc 119504
>gb|AC138136.2| Homo sapiens chromosome 8, clone RP11-158D1, complete sequence Length = 82309 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tgggagcattttacatcttc 68 |||||||||||||||||||| Sbjct: 35973 tgggagcattttacatcttc 35954
>gb|AC090453.4| Homo sapiens chromosome 8, clone RP11-380B11, complete sequence Length = 166452 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tgggagcattttacatcttc 68 |||||||||||||||||||| Sbjct: 159610 tgggagcattttacatcttc 159629
>gb|AF039573.1|AF039573 Oryza sativa abscisic acid- and stress-inducible protein (Asr1) mRNA, complete cds Length = 836 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 308 gaccgccgccgtggccgggagctcctcc 335 ||||||||||||||||| || ||||||| Sbjct: 385 gaccgccgccgtggccgcgatctcctcc 358
>dbj|AK119547.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-A11, full insert sequence Length = 850 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 308 gaccgccgccgtggccgggagctcctcc 335 ||||||||||||||||| || ||||||| Sbjct: 406 gaccgccgccgtggccgcgatctcctcc 379
>dbj|AK119208.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E02, full insert sequence Length = 817 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 308 gaccgccgccgtggccgggagctcctcc 335 ||||||||||||||||| || ||||||| Sbjct: 406 gaccgccgccgtggccgcgatctcctcc 379
>dbj|AK104677.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-D06, full insert sequence Length = 817 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 308 gaccgccgccgtggccgggagctcctcc 335 ||||||||||||||||| || ||||||| Sbjct: 406 gaccgccgccgtggccgcgatctcctcc 379
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 215 cgccgacggcggcccggcgc 234 |||||||||||||||||||| Sbjct: 43471 cgccgacggcggcccggcgc 43452
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 420 tccaccacgccgcggtagct 439 |||||||||||||||||||| Sbjct: 2035857 tccaccacgccgcggtagct 2035876
>dbj|AK064892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000K20, full insert sequence Length = 836 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 308 gaccgccgccgtggccgggagctcctcc 335 ||||||||||||||||| || ||||||| Sbjct: 409 gaccgccgccgtggccgcgatctcctcc 382
>dbj|AP006307.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-673J3, complete sequence Length = 143669 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 49 tgggagcattttacatcttc 68 |||||||||||||||||||| Sbjct: 71185 tgggagcattttacatcttc 71166
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 cgcgggcgacggcgtcgcgg 413 |||||||||||||||||||| Sbjct: 812736 cgcgggcgacggcgtcgcgg 812717
>gb|U59153.1|SAU59153 Streptomyces albus G hsp18 transcription regulator gene, complete cds Length = 1020 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 cgacggcgtcgcggatggcctcca 423 |||||||||| ||||||||||||| Sbjct: 302 cgacggcgtcccggatggcctcca 279
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 195 ggcaggtccggcgtcacgaa 214 |||||||||||||||||||| Sbjct: 1802698 ggcaggtccggcgtcacgaa 1802679
>dbj|AP000074.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 10/19, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 49 tgggagcattttacatcttc 68 |||||||||||||||||||| Sbjct: 81037 tgggagcattttacatcttc 81056 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,082,062 Number of Sequences: 3902068 Number of extensions: 3082062 Number of successful extensions: 60644 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 58087 Number of HSP's gapped (non-prelim): 2543 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
