ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32a11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
2dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.006
3ref|XM_948808.1| Theileria annulata strain Ankara hypothetical p... 44 0.40
4emb|AL354736.10| Human DNA sequence from clone RP11-205B18 on ch... 44 0.40
5gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, co... 42 1.6
6gb|AC130217.4| Mus musculus BAC clone RP23-237P18 from chromosom... 42 1.6
7gb|AC124055.6| Homo sapiens chromosome 11, clone RP4-608B4, comp... 42 1.6
8gb|AC021032.9| Homo sapiens chromosome 10 clone RP11-180I22, com... 42 1.6
9emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene 42 1.6
10gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, comp... 42 1.6
11gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-2... 42 1.6
12gb|AC002403.1|AC002403 Human Chromosome 11p15.5 pac pDJ608b4, co... 42 1.6
13gb|U90095.1|U90095 Human Chromosome 11p15.5 pac pDJ74k15, comple... 42 1.6
14gb|AC009391.16| Drosophila melanogaster clone BACR21I23, complet... 40 6.2
15gb|AC137902.10| Mus musculus chromosome 15, clone RP23-372O9, co... 40 6.2
16gb|AC140339.4| Mus musculus BAC clone RP24-64N14 from chromosome... 40 6.2
17gb|AC044807.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.2
18gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete s... 40 6.2
19gb|AC079276.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.2
20gb|AC114423.16| Mus musculus chromosome 6, clone RP23-461C23, co... 40 6.2
21gb|AC127694.3| Mus musculus BAC clone RP23-235J3 from chromosome... 40 6.2
22emb|AL607067.17| Human DNA sequence from clone RP11-201K10 on ch... 40 6.2
23emb|AL645821.1| Human DNA sequence from clone RP3-465G10 on chro... 40 6.2
24emb|AL592166.16| Human DNA sequence from clone RP11-269F19 on ch... 40 6.2
25emb|AL606468.8| Human DNA sequence from clone RP11-15I11 on chro... 40 6.2
26ref|XM_783711.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.2
27emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379... 40 6.2
28emb|AL118513.17|HSDJ685L9 Human DNA sequence from clone RP4-685L... 40 6.2
29emb|Z94801.1|HS465G10B Human DNA sequence from PAC 465G10 on chr... 40 6.2
30emb|CR352431.1| Gallus gallus finished cDNA, clone ChEST325l16 40 6.2
31dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
32gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, r... 40 6.2
33gb|AC011308.8| Homo sapiens BAC clone RP11-522N18 from 2, comple... 40 6.2
34gb|AC153613.9| Mus musculus 10 BAC RP23-23C9 (Roswell Park Cance... 40 6.2
35gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Canc... 40 6.2
36dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.2
37emb|Z23494.1|HS199ZB12 H. sapiens (D1S421) DNA segment containin... 40 6.2
38emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 i... 40 6.2
39gb|AE003765.3| Drosophila melanogaster chromosome 3R, section 10... 40 6.2
40gb|AE003780.4| Drosophila melanogaster chromosome 3R, section 11... 40 6.2
41gb|U40367.1|HSGPDM16 Human glycerol-3-phosphate dehydrogenase (G... 40 6.2
42emb|CT025633.3| Pan troglodytes chromosome X clone RP43-007L03 m... 40 6.2
43emb|AL845503.5| Mouse DNA sequence from clone RP23-292G16 on chr... 40 6.2
44emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chr... 40 6.2
45emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chrom... 40 6.2 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                             
Query: 6        tagaggacacaactcgatccaatgc-caccaactaaatttacata 49
                ||||||||||||||||||||||  | ||||| |||||||||||||
Sbjct: 31442533 tagaggacacaactcgatccaaaccacaccagctaaatttacata 31442577
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>dbj|AP005848.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0078N11
          Length = 155168

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 41/45 (91%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                          
Query: 6     tagaggacacaactcgatccaatgc-caccaactaaatttacata 49
             ||||||||||||||||||||||  | ||||| |||||||||||||
Sbjct: 77930 tagaggacacaactcgatccaaaccacaccagctaaatttacata 77974
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>ref|XM_948808.1| Theileria annulata strain Ankara hypothetical protein (TA06135)
            partial mRNA
          Length = 2595

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 249  acgcagtacagcagaaggagtg 270
            ||||||||||||||||||||||
Sbjct: 1769 acgcagtacagcagaaggagtg 1790
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>emb|AL354736.10| Human DNA sequence from clone RP11-205B18 on chromosome 13 Contains the
             5' end of a novel gene (FLJ32909), complete sequence
          Length = 158460

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 356   aaatatgtggaggacaaatata 377
             ||||||||||||||||||||||
Sbjct: 13989 aaatatgtggaggacaaatata 14010
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>gb|AC161812.3| Mus musculus chromosome 15, clone RP23-195I24, complete sequence
          Length = 204464

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 80     aagaggggaagaggcagacag 100
              |||||||||||||||||||||
Sbjct: 140633 aagaggggaagaggcagacag 140613
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>gb|AC130217.4| Mus musculus BAC clone RP23-237P18 from chromosome 13, complete
             sequence
          Length = 198116

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 73    agaacaaaagaggggaagagg 93
             |||||||||||||||||||||
Sbjct: 92983 agaacaaaagaggggaagagg 92963



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 73    agaacaaaagaggggaagagg 93
             |||||||||||||||||||||
Sbjct: 92794 agaacaaaagaggggaagagg 92774
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>gb|AC124055.6| Homo sapiens chromosome 11, clone RP4-608B4, complete sequence
          Length = 133815

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    gaaagggagaacaaaagaggg 86
             |||||||||||||||||||||
Sbjct: 45289 gaaagggagaacaaaagaggg 45309
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>gb|AC021032.9| Homo sapiens chromosome 10 clone RP11-180I22, complete sequence
          Length = 160635

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 64    gagaaagggagaacaaaagag 84
             |||||||||||||||||||||
Sbjct: 13364 gagaaagggagaacaaaagag 13344
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>emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene
          Length = 404123

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 66     gaaagggagaacaaaagaggg 86
              |||||||||||||||||||||
Sbjct: 208637 gaaagggagaacaaaagaggg 208617
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>gb|AC021424.6| Homo sapiens chromosome 11, clone RP11-38L8, complete sequence
          Length = 181025

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 66     gaaagggagaacaaaagaggg 86
              |||||||||||||||||||||
Sbjct: 174301 gaaagggagaacaaaagaggg 174321
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>gb|AC104834.4| Mus Musculus Strain C57BL6/J Chromosome 15 RP23-274F23, complete sequence
          Length = 215113

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 80     aagaggggaagaggcagacag 100
              |||||||||||||||||||||
Sbjct: 139400 aagaggggaagaggcagacag 139420
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>gb|AC002403.1|AC002403 Human Chromosome 11p15.5 pac pDJ608b4, complete sequence
          Length = 132960

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 66    gaaagggagaacaaaagaggg 86
             |||||||||||||||||||||
Sbjct: 45289 gaaagggagaacaaaagaggg 45309
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>gb|U90095.1|U90095 Human Chromosome 11p15.5 pac pDJ74k15, complete sequence
          Length = 120229

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 66     gaaagggagaacaaaagaggg 86
              |||||||||||||||||||||
Sbjct: 113873 gaaagggagaacaaaagaggg 113893
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>gb|AC009391.16| Drosophila melanogaster clone BACR21I23, complete sequence
          Length = 189254

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    cagaaagggagcaggaaaga 344
              ||||||||||||||||||||
Sbjct: 151230 cagaaagggagcaggaaaga 151211
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>gb|AC137902.10| Mus musculus chromosome 15, clone RP23-372O9, complete sequence
          Length = 196712

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     agaaagggagaacaaaagag 84
              ||||||||||||||||||||
Sbjct: 101729 agaaagggagaacaaaagag 101748
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>gb|AC140339.4| Mus musculus BAC clone RP24-64N14 from chromosome 17, complete sequence
          Length = 229599

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 112   gagccatctatccagctccgagct 135
             ||||||||| ||||||||||||||
Sbjct: 54472 gagccatctctccagctccgagct 54449
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>gb|AC044807.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-412F2, complete
              sequence
          Length = 182150

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     gacaggaggaggaacggagc 115
              ||||||||||||||||||||
Sbjct: 163956 gacaggaggaggaacggagc 163937
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>gb|AY294226.1| Uncultured bacterium cosmid gbiox603r, complete sequence
          Length = 40150

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   ctcaagcggcagccagcgcg 198
             ||||||||||||||||||||
Sbjct: 12789 ctcaagcggcagccagcgcg 12770
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>gb|AC079276.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-446B13, complete
             sequence
          Length = 205177

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    gacaggaggaggaacggagc 115
             ||||||||||||||||||||
Sbjct: 12636 gacaggaggaggaacggagc 12617
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>gb|AC114423.16| Mus musculus chromosome 6, clone RP23-461C23, complete sequence
          Length = 205074

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 326   agaaagggagcaggaaagagatacatat 353
             |||||||||| |||||||||||| ||||
Sbjct: 85759 agaaagggagtaggaaagagatagatat 85786
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>gb|AC127694.3| Mus musculus BAC clone RP23-235J3 from chromosome 7, complete sequence
          Length = 225732

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 109    acggagccatctatccagctccga 132
              |||||||||||| |||||||||||
Sbjct: 133874 acggagccatctctccagctccga 133897
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>emb|AL607067.17| Human DNA sequence from clone RP11-201K10 on chromosome 1 Contains a
            high-mobility group nucleosomal binding domain 2 (HMGN2)
            pseudogene and the KRTCAP2 gene for keratinocyte
            associated protein 2, complete sequence
          Length = 32360

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  agatacatatttaaatatgt 363
            ||||||||||||||||||||
Sbjct: 5573 agatacatatttaaatatgt 5554



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 344  agatacatatttaaatatgt 363
            ||||||||||||||||||||
Sbjct: 5550 agatacatatttaaatatgt 5569



 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 344  agatacatatttaaatatgt 363
            ||||||||||||||||||||
Sbjct: 5542 agatacatatttaaatatgt 5523
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>emb|AL645821.1| Human DNA sequence from clone RP3-465G10 on chromosome Xq21.1 Contains
             the 5' end of the gene for a novel protein similar to
             phosphoglycerate mutase 3 (LOC349441)(possible pseudogene)
             and the ATP7A gene for Cu++ transporting ATPase alpha
             polypeptide (Menkes syndrome), complete sequence
          Length = 84163

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   agagatacatatttaaatat 361
             ||||||||||||||||||||
Sbjct: 33217 agagatacatatttaaatat 33236
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>emb|AL592166.16| Human DNA sequence from clone RP11-269F19 on chromosome 1 Contains the
             KIF2C gene for kinesin family member 2C, a novel gene, the
             RPS8 gene for ribosomal protein S8, a ribosomal protein
             S15a (RPS15A) pseudogene, the VMD2L2 gene for vitelliform
             macular dystrophy-like 2, the CNK gene for
             cytokine-inducible kinase, the gene for a novel protein, a
             novel gene (FLJ31588), the 3' end of the PTCH2 gene for
             patched homolog 2 (Drosophila) and seven CpG islands,
             complete sequence
          Length = 90550

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 64    gagaaagggagaacaaaagagggg 87
             |||||| |||||||||||||||||
Sbjct: 55077 gagaaatggagaacaaaagagggg 55054
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>emb|AL606468.8| Human DNA sequence from clone RP11-15I11 on chromosome 1 Contains the 3'
              end of the RAMP gene for RA-regulated nuclear
              matrix-associated protein, a novel gene and the 3' end of a
              novel gene, complete sequence
          Length = 160200

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 68     aagggagaacaaaagaggggaagaggcagaca 99
              ||||||||||||||||||| ||  ||||||||
Sbjct: 147708 aagggagaacaaaagagggcaaagggcagaca 147739
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>ref|XM_783711.1| PREDICTED: Strongylocentrotus purpuratus similar to ATP synthase,
           H+ transporting, mitochondrial F0 complex, subunit c
           (subunit 9) (LOC583818), mRNA
          Length = 717

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 352 atttaaatatgtggaggaca 371
           ||||||||||||||||||||
Sbjct: 680 atttaaatatgtggaggaca 661
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>emb|AL121900.26|HSBA379J5 Human DNA sequence from clone RP11-379J5 on chromosome 20 Contains the 3'
              end of the SEC23B gene for Sec23 (S. cerevisiae) homolog B,
              two novel genes, the 5' end of the HARS2 gene for
              histidyl-tRNA synthetase 2, a pseudogene similar to part of
              homeobox proteins and two CpG islands, complete sequence
          Length = 149933

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 322    aggcagaaagggagcaggaa 341
              ||||||||||||||||||||
Sbjct: 123368 aggcagaaagggagcaggaa 123349
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>emb|AL118513.17|HSDJ685L9 Human DNA sequence from clone RP4-685L9 on chromosome 20 Contains the
             gene for a novel protein (FLJ90166), the 5' end of a nove
             genel (LOC149773) and two CpG islands, complete sequence
          Length = 92835

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   agaaggagtgaagcttaggg 280
             ||||||||||||||||||||
Sbjct: 76829 agaaggagtgaagcttaggg 76848
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>emb|Z94801.1|HS465G10B Human DNA sequence from PAC 465G10 on chromosome X contains Menkes
             Disease (ATP7A) putative Cu++-transporting P-type ATPase
             exons 2 to 21, PGAM-B, ESTs
          Length = 74432

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 342   agagatacatatttaaatat 361
             ||||||||||||||||||||
Sbjct: 41216 agagatacatatttaaatat 41197
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>emb|CR352431.1| Gallus gallus finished cDNA, clone ChEST325l16
          Length = 1124

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 326 agaaagggagcaggaaagag 345
           ||||||||||||||||||||
Sbjct: 584 agaaagggagcaggaaagag 565
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 433      ccatggcgccgccgccgctt 452
                ||||||||||||||||||||
Sbjct: 13835854 ccatggcgccgccgccgctt 13835835
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>gb|AC008028.3|AC008028 Drosophila melanogaster, chromosome 3R, region 98C-98D, BAC clone
              BACR14L13, complete sequence
          Length = 197348

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 344    agatacatatttaaatatgtggag 367
              |||||||||| |||||||||||||
Sbjct: 129169 agatacatatataaatatgtggag 129146
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>gb|AC011308.8| Homo sapiens BAC clone RP11-522N18 from 2, complete sequence
          Length = 124740

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    caaaagaggggaagaggcag 96
             ||||||||||||||||||||
Sbjct: 95284 caaaagaggggaagaggcag 95265
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>gb|AC153613.9| Mus musculus 10 BAC RP23-23C9 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 214432

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    agaggggaagaggcagacag 100
             ||||||||||||||||||||
Sbjct: 13046 agaggggaagaggcagacag 13065
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>gb|AC153842.9| Mus musculus 6 BAC RP23-348K12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 174100

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 81     agaggggaagaggcagacag 100
              ||||||||||||||||||||
Sbjct: 137142 agaggggaagaggcagacag 137161
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>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1655_B12
          Length = 132736

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 433   ccatggcgccgccgccgctt 452
             ||||||||||||||||||||
Sbjct: 85338 ccatggcgccgccgccgctt 85319
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>emb|Z23494.1|HS199ZB12 H. sapiens (D1S421) DNA segment containing (CA) repeat; clone
           AFM199zb12; single read
          Length = 327

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 64  gagaaagggagaacaaaagagggg 87
           |||||| |||||||||||||||||
Sbjct: 250 gagaaatggagaacaaaagagggg 273
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>emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 in linkage group 5,
              complete sequence
          Length = 209796

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 65     agaaagggagaacaaaagag 84
              ||||||||||||||||||||
Sbjct: 197914 agaaagggagaacaaaagag 197895
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>gb|AE003765.3| Drosophila melanogaster chromosome 3R, section 103 of 118 of the complete
              sequence
          Length = 239049

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 344    agatacatatttaaatatgtggag 367
              |||||||||| |||||||||||||
Sbjct: 104848 agatacatatataaatatgtggag 104825
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>gb|AE003780.4| Drosophila melanogaster chromosome 3R, section 118 of 118 of the complete
              sequence
          Length = 256818

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 325    cagaaagggagcaggaaaga 344
              ||||||||||||||||||||
Sbjct: 218794 cagaaagggagcaggaaaga 218775
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>gb|U40367.1|HSGPDM16 Human glycerol-3-phosphate dehydrogenase (GPD2) gene, nuclear
          gene encoding mitochondrial protein, exon 17, and
          complete cds
          Length = 687

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 77 caaaagaggggaagaggcag 96
          ||||||||||||||||||||
Sbjct: 83 caaaagaggggaagaggcag 64
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>emb|CT025633.3| Pan troglodytes chromosome X clone RP43-007L03 map Xq28, complete
             sequence
          Length = 205943

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 342   agagatacatatttaaatat 361
             ||||||||||||||||||||
Sbjct: 22845 agagatacatatttaaatat 22864
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>emb|AL845503.5| Mouse DNA sequence from clone RP23-292G16 on chromosome 2, complete
            sequence
          Length = 148491

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 82   gaggggaagaggcagacaggaggaggaa 109
            |||||||||||| ||| |||||||||||
Sbjct: 7565 gaggggaagaggaagaaaggaggaggaa 7592
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>emb|AL672251.10| Mouse DNA sequence from clone RP23-16O15 on chromosome 2, complete
              sequence
          Length = 204214

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    aagggagcaggaaagagata 348
              ||||||||||||||||||||
Sbjct: 134146 aagggagcaggaaagagata 134165
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>emb|AL928689.7| Mouse DNA sequence from clone RP23-35P3 on chromosome 2, complete
             sequence
          Length = 182529

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   ttaaatatgtggaggacaaa 373
             ||||||||||||||||||||
Sbjct: 17564 ttaaatatgtggaggacaaa 17545


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,848,671
Number of Sequences: 3902068
Number of extensions: 4848671
Number of successful extensions: 97900
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 97621
Number of HSP's gapped (non-prelim): 277
length of query: 463
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 441
effective length of database: 17,147,199,772
effective search space: 7561915099452
effective search space used: 7561915099452
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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