ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ417517.1|OSA417517 Oryza sativa partial mRNA for H+-transp... 365 9e-98
2dbj|AK072694.1| Oryza sativa (japonica cultivar-group) cDNA clon... 365 9e-98
3ref|NM_195647.1| Oryza sativa (japonica cultivar-group) putative... 349 5e-93
4gb|AY108441.1| Zea mays PCO083558 mRNA sequence 216 5e-53
5dbj|AB194067.1| Ipomoea nil mRNA for mitochondrial F1-ATPase gam... 159 1e-35
6gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
7gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare st... 149 1e-32
8dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 149 1e-32
9gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 149 1e-32
10dbj|D14699.1|IPBF1ATPG Ipomoea batatas mRNA for F1-ATPase gammma... 143 6e-31
11ref|NM_128864.2| Arabidopsis thaliana hydrogen-transporting ATP ... 133 6e-28
12gb|BT000409.1| Arabidopsis thaliana mitochondrial F1-ATPase, gam... 133 6e-28
13gb|AY136289.1| Arabidopsis thaliana mitochondrial F1-ATPase, gam... 133 6e-28
14gb|AY102152.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, co... 133 6e-28
15gb|AY062627.1| Arabidopsis thaliana mitochondrial F1-ATPase, gam... 133 6e-28
16gb|AY039513.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, co... 133 6e-28
17emb|BX819675.1|CNS0A9BS Arabidopsis thaliana Full-length cDNA Co... 133 6e-28
18gb|AY086685.1| Arabidopsis thaliana clone 26812 mRNA, complete s... 133 6e-28
19dbj|D88374.1| Arabidopsis thaliana mRNA for gamma subunit of mit... 125 1e-25
20gb|BT018752.1| Zea mays clone EL01N0523B01.d mRNA sequence 115 1e-22
21gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 geno... 103 5e-19
22gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 ma... 103 5e-19
23gb|AF023858.1|AF023858 Solanum tuberosum ATP synthase gamma chai... 103 5e-19
24emb|BX820526.1|CNS0A9P1 Arabidopsis thaliana Full-length cDNA Co... 86 1e-13
25emb|AJ005366.1|ATA005366 Aesculus turbinata microsatellite DNA, ... 82 2e-12
26gb|AY375344.1| Gossypium barbadense fiber protein Fb33 mRNA, par... 72 2e-09
27emb|BX548171.4| Zebrafish DNA sequence from clone DKEY-152J20 in... 44 0.44
28emb|BX469923.7| Zebrafish DNA sequence from clone RP71-3J3 in li... 44 0.44
29gb|AC006354.2| Homo sapiens PAC clone RP5-1091B14 from 7, comple... 42 1.7
30gb|AC099791.2| Homo sapiens chromosome 1 clone RP11-430G17, comp... 42 1.7
31gb|AC022348.2|AC022348 Drosophila melanogaster, chromosome X, re... 42 1.7
32gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 ... 42 1.7
33ref|NM_105208.1| Arabidopsis thaliana CYP96A3; heme binding / ir... 40 6.8
34gb|AC113078.17| Mus musculus chromosome 18, clone RP23-287G21, c... 40 6.8
35gb|AC163620.4| Mus musculus BAC clone RP23-117D22 from chromosom... 40 6.8
36ref|XM_585301.2| PREDICTED: Bos taurus similar to Ubiquitin-prot... 40 6.8
37ref|XM_615804.2| PREDICTED: Bos taurus similar to SORCS receptor... 40 6.8
38gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome... 40 6.8
39ref|XM_736259.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 6.8
40emb|BX511153.9| Zebrafish DNA sequence from clone DKEYP-66D1 in ... 40 6.8
41dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 40 6.8
42ref|XM_690687.1| PREDICTED: Danio rerio similar to Pkp3-prov pro... 40 6.8
43gb|AC074031.16| Homo sapiens 12 BAC RP11-272K23 (Roswell Park Ca... 40 6.8
44gb|AC010587.6| Homo sapiens chromosome 5 clone CTC-394G3, comple... 40 6.8
45gb|AC010372.6| Homo sapiens chromosome 5 clone CTD-2049O16, comp... 40 6.8
46gb|AF528573.1| Arabidopsis thaliana ecotype Lisse-2 putative cyt... 40 6.8
47gb|AF528572.1| Arabidopsis thaliana ecotype Ita-0 putative cytoc... 40 6.8
48gb|AF528571.1| Arabidopsis thaliana ecotype Gr-3 putative cytoch... 40 6.8
49gb|AF528570.1| Arabidopsis thaliana ecotype Chi-1 putative cytoc... 40 6.8
50gb|AF528569.1| Arabidopsis thaliana ecotype Bs-1 putative cytoch... 40 6.8
51gb|AF528568.1| Arabidopsis thaliana ecotype Bla-1 putative cytoc... 40 6.8
52gb|AF528567.1| Arabidopsis thaliana ecotype Kas-1 putative cytoc... 40 6.8
53gb|AF528566.1| Arabidopsis thaliana ecotype Cvi-0 putative cytoc... 40 6.8
54gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 se... 40 6.8
55gb|AF087753.1|AF087753 Oryctolagus cuniculus clone Lb 80-H immun... 40 6.8
56emb|AL954692.9| Zebrafish DNA sequence from clone CH211-284O19, ... 40 6.8
57gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, co... 40 6.8 
>emb|AJ417517.1|OSA417517 Oryza sativa partial mRNA for H+-transporting ATP synthase (xd1
           gene)
          Length = 599

 Score =  365 bits (184), Expect = 9e-98
 Identities = 265/292 (90%)
 Strand = Plus / Minus

                                                                       
Query: 209 agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 268
           ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 499 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 440

                                                                       
Query: 269 tgatagatgcttgacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccgg 328
           ||||||||||||||||||||||||||||||| || || || || |||||||||||||| |
Sbjct: 439 tgatagatgcttgacgtgtcctgttgtatgtgagggtgagtcgatcaagcatttcaccag 380

                                                                       
Query: 329 catttctgctggagctgtccatagcagacatacgggcaccaagctcactgcaggcattct 388
           | |||||||||||||||||||||||||||||||| || |||||||||||||| |||||||
Sbjct: 379 cgtttctgctggagctgtccatagcagacatacgtgctccaagctcactgcatgcattct 320

                                                                       
Query: 389 ctagaacagcattatacataacacaagaaaactggaacttggtaagattctgcaggattt 448
           ||||| |||||||||||| |||||||||||||||||||| |||||||||||| || ||||
Sbjct: 319 ctagagcagcattatacacaacacaagaaaactggaactcggtaagattctgaagaattt 260

                                                               
Query: 449 ctgattttgtttcacctccttcaatttcatacgaatccagctcaccaacctt 500
           ||||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 259 ctgatttagtttcacctccttcaatttcatatgaatccaggtcaccaacctt 208
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>dbj|AK072694.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023135E20, full
            insert sequence
          Length = 1413

 Score =  365 bits (184), Expect = 9e-98
 Identities = 265/292 (90%)
 Strand = Plus / Minus

                                                                        
Query: 209  agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 268
            ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 1049 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 990

                                                                        
Query: 269  tgatagatgcttgacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccgg 328
            ||||||||||||||||||||||||||||||| || || || || |||||||||||||| |
Sbjct: 989  tgatagatgcttgacgtgtcctgttgtatgtgagggtgagtcgatcaagcatttcaccag 930

                                                                        
Query: 329  catttctgctggagctgtccatagcagacatacgggcaccaagctcactgcaggcattct 388
            | |||||||||||||||||||| ||||||||||| || |||||||||||||| |||||||
Sbjct: 929  cgtttctgctggagctgtccatggcagacatacgtgctccaagctcactgcatgcattct 870

                                                                        
Query: 389  ctagaacagcattatacataacacaagaaaactggaacttggtaagattctgcaggattt 448
            ||||| ||||||||||||||||||||||||||||||||| |||||||||||| || ||||
Sbjct: 869  ctagagcagcattatacataacacaagaaaactggaactcggtaagattctgaagaattt 810

                                                                
Query: 449  ctgattttgtttcacctccttcaatttcatacgaatccagctcaccaacctt 500
            ||||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 809  ctgatttagtttcacctccttcaatttcatatgaatccaggtcaccaacctt 758
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>ref|NM_195647.1| Oryza sativa (japonica cultivar-group) putative ATP synthase gamma
            chain, mitochondrial precursor (OSJNBa0053D03.10), mRNA
          Length = 1107

 Score =  349 bits (176), Expect = 5e-93
 Identities = 254/280 (90%)
 Strand = Plus / Minus

                                                                        
Query: 221  atccctcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgctt 280
            |||||||||| ||||| || || || || |||||| ||||||| ||||||||||||||||
Sbjct: 1105 atccctcaagggcagaagcgccagagataatctcaatgagctctgtagtgatagatgctt 1046

                                                                        
Query: 281  gacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctgg 340
            ||||||||||||||||||| || || || || |||||||||||||| || ||||||||||
Sbjct: 1045 gacgtgtcctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctgg 986

                                                                        
Query: 341  agctgtccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcat 400
            |||||||||| ||||||||||| || |||||||||||||| |||||||||||| ||||||
Sbjct: 985  agctgtccatggcagacatacgtgctccaagctcactgcatgcattctctagagcagcat 926

                                                                        
Query: 401  tatacataacacaagaaaactggaacttggtaagattctgcaggatttctgattttgttt 460
            ||||||||||||||||||||||||||| |||||||||||| || ||||||||||| ||||
Sbjct: 925  tatacataacacaagaaaactggaactcggtaagattctgaagaatttctgatttagttt 866

                                                    
Query: 461  cacctccttcaatttcatacgaatccagctcaccaacctt 500
            ||||||||||||||||||| |||||||| |||||||||||
Sbjct: 865  cacctccttcaatttcatatgaatccaggtcaccaacctt 826
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>gb|AY108441.1| Zea mays PCO083558 mRNA sequence
          Length = 1514

 Score =  216 bits (109), Expect = 5e-53
 Identities = 238/281 (84%)
 Strand = Plus / Minus

                                                                        
Query: 223  ccctcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttga 282
            |||||||| || || ||||| ||||| |||||||| ||||| || ||||| |||||||| 
Sbjct: 1065 ccctcaagggccgatgcaccagatataatctcagtaagctctgtggtgatggatgcttgg 1006

                                                                        
Query: 283  cgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggag 342
            |||||||||||||| || || || ||||| |||||||| || || ||||||||||| |||
Sbjct: 1005 cgtgtcctgttgtaagtgagagtgagacgatcaagcatatcgccagcatttctgctagag 946

                                                                        
Query: 343  ctgtccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcatta 402
            |||||||| |||||||||||||| |||||||||||||| |||||||||||  || |||| 
Sbjct: 945  ctgtccatggcagacatacgggctccaagctcactgcatgcattctctagggcaccattg 886

                                                                        
Query: 403  tacataacacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttca 462
            ||||| |||||||||||||||||||  |  ||||||||||  || ||||||||||| || 
Sbjct: 885  tacatgacacaagaaaactggaactcagctagattctgcaaaatctctgattttgtctcg 826

                                                     
Query: 463  cctccttcaatttcatacgaatccagctcaccaaccttccc 503
            || |||||||| ||||| ||||| || ||||| | ||||||
Sbjct: 825  ccgccttcaatctcataagaatctaggtcacccatcttccc 785
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>dbj|AB194067.1| Ipomoea nil mRNA for mitochondrial F1-ATPase gamma subunit, complete
            cds
          Length = 1412

 Score =  159 bits (80), Expect = 1e-35
 Identities = 203/244 (83%)
 Strand = Plus / Minus

                                                                        
Query: 244  gatatgatctcagtgagctccgtagtgatagatgcttgacgtgtcctgttgtatgtcagt 303
            ||||||||||| || || || || ||||||||||||||||| || |||||||| || || 
Sbjct: 1033 gatatgatctctgtcagttctgtggtgatagatgcttgacgggttctgttgtaagtgagg 974

                                                                        
Query: 304  gtaagacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacatacgg 363
            || || || |||||||||||||| ||||| ||||||||||||||||| |||||||| |  
Sbjct: 973  gtgaggcgatcaagcatttcaccagcattcctgctggagctgtccatggcagacatcctt 914

                                                                        
Query: 364  gcaccaagctcactgcaggcattctctagaacagcattatacataacacaagaaaactgg 423
            || ||  |||||||||| ||||||||||||||||||||  |||| ||||| ||||| |||
Sbjct: 913  gccccttgctcactgcaagcattctctagaacagcattgaacattacacatgaaaattgg 854

                                                                        
Query: 424  aacttggtaagattctgcaggatttctgattttgtttcacctccttcaatttcatacgaa 483
            || |  || |||||||| || | |||||| ||||  ||| | |||||||||||||| |||
Sbjct: 853  aattcagtgagattctgaagtacttctgactttgactcagcaccttcaatttcataagaa 794

                
Query: 484  tcca 487
            ||||
Sbjct: 793  tcca 790
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>gb|AC131968.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAa0053D03, complete sequence
          Length = 150496

 Score =  149 bits (75), Expect = 1e-32
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                         
Query: 288   cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 347
             |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 23627 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 23568

                                                                         
Query: 348   catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 407
             ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 23567 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 23508

                
Query: 408   aac 410
             |||
Sbjct: 23507 aac 23505



 Score =  135 bits (68), Expect = 2e-28
 Identities = 86/92 (93%)
 Strand = Plus / Minus

                                                                         
Query: 409   acacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacctcct 468
             ||||||||||||||||||| |||||||||||| || ||||||||||| ||||||||||||
Sbjct: 23334 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagtttcacctcct 23275

                                             
Query: 469   tcaatttcatacgaatccagctcaccaacctt 500
             ||||||||||| |||||||| |||||||||||
Sbjct: 23274 tcaatttcatatgaatccaggtcaccaacctt 23243



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                         
Query: 209   agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 268
             ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 24040 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 23981

                                    
Query: 269   tgatagatgcttgacgtgtcctg 291
             |||||||||||||||||||||||
Sbjct: 23980 tgatagatgcttgacgtgtcctg 23958
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>gb|AC021892.16| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0053D03, from chromosome 10, complete sequence
          Length = 199113

 Score =  149 bits (75), Expect = 1e-32
 Identities = 111/123 (90%)
 Strand = Plus / Plus

                                                                         
Query: 288   cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 347
             |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 36374 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 36433

                                                                         
Query: 348   catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 407
             ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 36434 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 36493

                
Query: 408   aac 410
             |||
Sbjct: 36494 aac 36496



 Score =  135 bits (68), Expect = 2e-28
 Identities = 86/92 (93%)
 Strand = Plus / Plus

                                                                         
Query: 409   acacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacctcct 468
             ||||||||||||||||||| |||||||||||| || ||||||||||| ||||||||||||
Sbjct: 36667 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagtttcacctcct 36726

                                             
Query: 469   tcaatttcatacgaatccagctcaccaacctt 500
             ||||||||||| |||||||| |||||||||||
Sbjct: 36727 tcaatttcatatgaatccaggtcaccaacctt 36758



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Plus

                                                                         
Query: 209   agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 268
             ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 35961 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 36020

                                    
Query: 269   tgatagatgcttgacgtgtcctg 291
             |||||||||||||||||||||||
Sbjct: 36021 tgatagatgcttgacgtgtcctg 36043
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
               sequence
          Length = 22685906

 Score =  149 bits (75), Expect = 1e-32
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                           
Query: 288     cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 347
               |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 8220105 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 8220046

                                                                           
Query: 348     catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 407
               ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 8220045 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 8219986

                  
Query: 408     aac 410
               |||
Sbjct: 8219985 aac 8219983



 Score =  135 bits (68), Expect = 2e-28
 Identities = 86/92 (93%)
 Strand = Plus / Minus

                                                                           
Query: 409     acacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacctcct 468
               ||||||||||||||||||| |||||||||||| || ||||||||||| ||||||||||||
Sbjct: 8219812 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagtttcacctcct 8219753

                                               
Query: 469     tcaatttcatacgaatccagctcaccaacctt 500
               ||||||||||| |||||||| |||||||||||
Sbjct: 8219752 tcaatttcatatgaatccaggtcaccaacctt 8219721



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 209     agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 268
               ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 8220518 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 8220459

                                      
Query: 269     tgatagatgcttgacgtgtcctg 291
               |||||||||||||||||||||||
Sbjct: 8220458 tgatagatgcttgacgtgtcctg 8220436
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  149 bits (75), Expect = 1e-32
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                           
Query: 288     cctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctgtc 347
               |||||||||||| || || || || |||||||||||||| || |||||||||||||||||
Sbjct: 8225204 cctgttgtatgtgagggtgagtcgatcaagcatttcaccagcgtttctgctggagctgtc 8225145

                                                                           
Query: 348     catagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatacat 407
               ||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||||||
Sbjct: 8225144 catggcagacatacgtgctccaagctcactgcatgcattctctagagcagcattatacat 8225085

                  
Query: 408     aac 410
               |||
Sbjct: 8225084 aac 8225082



 Score =  135 bits (68), Expect = 2e-28
 Identities = 86/92 (93%)
 Strand = Plus / Minus

                                                                           
Query: 409     acacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacctcct 468
               ||||||||||||||||||| |||||||||||| || ||||||||||| ||||||||||||
Sbjct: 8224911 acacaagaaaactggaactcggtaagattctgaagaatttctgatttagtttcacctcct 8224852

                                               
Query: 469     tcaatttcatacgaatccagctcaccaacctt 500
               ||||||||||| |||||||| |||||||||||
Sbjct: 8224851 tcaatttcatatgaatccaggtcaccaacctt 8224820



 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 74/83 (89%)
 Strand = Plus / Minus

                                                                           
Query: 209     agtttcatcatcatccctcaagagcagaggcaccggatatgatctcagtgagctccgtag 268
               ||||||||||| |||||||||| ||||| || || || || |||||| ||||||| ||||
Sbjct: 8225617 agtttcatcattatccctcaagggcagaagcgccagagataatctcaatgagctctgtag 8225558

                                      
Query: 269     tgatagatgcttgacgtgtcctg 291
               |||||||||||||||||||||||
Sbjct: 8225557 tgatagatgcttgacgtgtcctg 8225535
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>dbj|D14699.1|IPBF1ATPG Ipomoea batatas mRNA for F1-ATPase gammma subunit, complete cds
          Length = 1389

 Score =  143 bits (72), Expect = 6e-31
 Identities = 183/220 (83%)
 Strand = Plus / Minus

                                                                        
Query: 268  gtgatagatgcttgacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccg 327
            ||||||||||||||||| || |||||||| || || || || || |||||||||||||| 
Sbjct: 1010 gtgatagatgcttgacgggttctgttgtaagtgagggtgaggcgatcaagcatttcacca 951

                                                                        
Query: 328  gcatttctgctggagctgtccatagcagacatacgggcaccaagctcactgcaggcattc 387
            ||||| ||||||||||||||||| |||||||| |  || ||  |||||||||| ||||||
Sbjct: 950  gcattcctgctggagctgtccatggcagacatccttgccccttgctcactgcaagcattc 891

                                                                        
Query: 388  tctagaacagcattatacataacacaagaaaactggaacttggtaagattctgcaggatt 447
            ||||||||||||||  |||  ||||  ||||| ||||| |  || |||||||| |||| |
Sbjct: 890  tctagaacagcattgaacaatacacttgaaaattggaattcagtgagattctgaaggact 831

                                                    
Query: 448  tctgattttgtttcacctccttcaatttcatacgaatcca 487
            ||||| ||||  ||| | |||||||||||||| |||||||
Sbjct: 830  tctgactttgactcagcaccttcaatttcataagaatcca 791
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>ref|NM_128864.2| Arabidopsis thaliana hydrogen-transporting ATP synthase, rotational
            mechanism / hydrogen-transporting ATPase, rotational
            mechanism AT2G33040 mRNA, complete cds
          Length = 1309

 Score =  133 bits (67), Expect = 6e-28
 Identities = 220/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 226  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1098 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1039

                                                                        
Query: 286  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1038 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 979

                                                                        
Query: 346  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 405
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 978  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 919

                                                                        
Query: 406  ataacacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacct 465
            || |||||||| || ||||||| ||  ||||||||||  ||||||   |||||||| || 
Sbjct: 918  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 859

                                           
Query: 466  ccttcaatttcatacgaatccagctcaccaa 496
            |||||||| ||||| || || ||||| ||||
Sbjct: 858  ccttcaatctcatatgagtcaagctcgccaa 828
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>gb|BT000409.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit
           (ATP3_ARATH) (At2g33040) mRNA, complete cds
          Length = 1092

 Score =  133 bits (67), Expect = 6e-28
 Identities = 220/271 (81%)
 Strand = Plus / Minus

                                                                       
Query: 226 tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
           ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 965 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 906

                                                                       
Query: 286 gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
           |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 905 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 846

                                                                       
Query: 346 tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 405
           ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 845 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 786

                                                                       
Query: 406 ataacacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacct 465
           || |||||||| || ||||||| ||  ||||||||||  ||||||   |||||||| || 
Sbjct: 785 atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 726

                                          
Query: 466 ccttcaatttcatacgaatccagctcaccaa 496
           |||||||| ||||| || || ||||| ||||
Sbjct: 725 ccttcaatctcatatgagtcaagctcgccaa 695
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>gb|AY136289.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit
            (ATP3_ARATH) (At2g33040) mRNA, complete cds
          Length = 1265

 Score =  133 bits (67), Expect = 6e-28
 Identities = 220/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 226  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1053 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 994

                                                                        
Query: 286  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 993  gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 934

                                                                        
Query: 346  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 405
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 933  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 874

                                                                        
Query: 406  ataacacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacct 465
            || |||||||| || ||||||| ||  ||||||||||  ||||||   |||||||| || 
Sbjct: 873  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 814

                                           
Query: 466  ccttcaatttcatacgaatccagctcaccaa 496
            |||||||| ||||| || || ||||| ||||
Sbjct: 813  ccttcaatctcatatgagtcaagctcgccaa 783
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>gb|AY102152.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, complete cds
          Length = 978

 Score =  133 bits (67), Expect = 6e-28
 Identities = 220/271 (81%)
 Strand = Plus / Minus

                                                                       
Query: 226 tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
           ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 965 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 906

                                                                       
Query: 286 gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
           |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 905 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 846

                                                                       
Query: 346 tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 405
           ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 845 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 786

                                                                       
Query: 406 ataacacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacct 465
           || |||||||| || ||||||| ||  ||||||||||  ||||||   |||||||| || 
Sbjct: 785 atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 726

                                          
Query: 466 ccttcaatttcatacgaatccagctcaccaa 496
           |||||||| ||||| || || ||||| ||||
Sbjct: 725 ccttcaatctcatatgagtcaagctcgccaa 695
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>gb|AY062627.1| Arabidopsis thaliana mitochondrial F1-ATPase, gamma subunit
            (ATP3_ARATH) (At2g33040; F25I18.22) mRNA, complete cds
          Length = 1360

 Score =  133 bits (67), Expect = 6e-28
 Identities = 220/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 226  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1064 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1005

                                                                        
Query: 286  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1004 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 945

                                                                        
Query: 346  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 405
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 944  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 885

                                                                        
Query: 406  ataacacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacct 465
            || |||||||| || ||||||| ||  ||||||||||  ||||||   |||||||| || 
Sbjct: 884  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 825

                                           
Query: 466  ccttcaatttcatacgaatccagctcaccaa 496
            |||||||| ||||| || || ||||| ||||
Sbjct: 824  ccttcaatctcatatgagtcaagctcgccaa 794
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>gb|AY039513.1| Arabidopsis thaliana At2g33040/F25I18.22 mRNA, complete cds
          Length = 1238

 Score =  133 bits (67), Expect = 6e-28
 Identities = 220/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 226  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1051 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 992

                                                                        
Query: 286  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 991  gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 932

                                                                        
Query: 346  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 405
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 931  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 872

                                                                        
Query: 406  ataacacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacct 465
            || |||||||| || ||||||| ||  ||||||||||  ||||||   |||||||| || 
Sbjct: 871  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 812

                                           
Query: 466  ccttcaatttcatacgaatccagctcaccaa 496
            |||||||| ||||| || || ||||| ||||
Sbjct: 811  ccttcaatctcatatgagtcaagctcgccaa 781
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>emb|BX819675.1|CNS0A9BS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS16ZE03 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1205

 Score =  133 bits (67), Expect = 6e-28
 Identities = 220/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 226  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1068 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1009

                                                                        
Query: 286  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1008 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 949

                                                                        
Query: 346  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 405
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 948  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 889

                                                                        
Query: 406  ataacacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacct 465
            || |||||||| || ||||||| ||  ||||||||||  ||||||   |||||||| || 
Sbjct: 888  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 829

                                           
Query: 466  ccttcaatttcatacgaatccagctcaccaa 496
            |||||||| ||||| || || ||||| ||||
Sbjct: 828  ccttcaatctcatatgagtcaagctcgccaa 798
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>gb|AY086685.1| Arabidopsis thaliana clone 26812 mRNA, complete sequence
          Length = 1310

 Score =  133 bits (67), Expect = 6e-28
 Identities = 220/271 (81%)
 Strand = Plus / Minus

                                                                        
Query: 226  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1098 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 1039

                                                                        
Query: 286  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1038 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 979

                                                                        
Query: 346  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 405
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 978  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 919

                                                                        
Query: 406  ataacacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacct 465
            || |||||||| || ||||||| ||  ||||||||||  ||||||   |||||||| || 
Sbjct: 918  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 859

                                           
Query: 466  ccttcaatttcatacgaatccagctcaccaa 496
            |||||||| ||||| || || ||||| ||||
Sbjct: 858  ccttcaatctcatatgagtcaagctcgccaa 828
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>dbj|D88374.1| Arabidopsis thaliana mRNA for gamma subunit of mitochondrial
            F1-ATPase, complete cds
          Length = 1267

 Score =  125 bits (63), Expect = 1e-25
 Identities = 219/271 (80%)
 Strand = Plus / Minus

                                                                        
Query: 226  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 1039 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 980

                                                                        
Query: 286  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 979  gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 920

                                                                        
Query: 346  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcattatac 405
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||  ||
Sbjct: 919  tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcattgaac 860

                                                                        
Query: 406  ataacacaagaaaactggaacttggtaagattctgcaggatttctgattttgtttcacct 465
            || |||||||| || ||||||| ||  ||||||||||  ||||||   |||||||| || 
Sbjct: 859  atcacacaagagaattggaactcggccagattctgcaatatttctccctttgtttcccca 800

                                           
Query: 466  ccttcaatttcatacgaatccagctcaccaa 496
            || ||||| ||||| || || ||||| ||||
Sbjct: 799  ccctcaatctcatatgagtcaagctcgccaa 769
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>gb|BT018752.1| Zea mays clone EL01N0523B01.d mRNA sequence
          Length = 1345

 Score =  115 bits (58), Expect = 1e-22
 Identities = 216/268 (80%), Gaps = 8/268 (2%)
 Strand = Plus / Minus

                                                                        
Query: 221  atccctcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgctt 280
            |||| ||||| || || ||||| ||||| |||||||| ||||| || ||||| |||||||
Sbjct: 1039 atccttcaagggctgatgcaccagatataatctcagtaagctctgtggtgatggatgctt 980

                                                                        
Query: 281  gacgtgtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctgg 340
            | |||||||||||||| || || || ||||| |||||| | | ||  ||||||||||| |
Sbjct: 979  ggcgtgtcctgttgtaagtaagcgtgagacgatcaagcctattacgagcatttctgctag 920

                                                                        
Query: 341  agctgtccatagcagaca----tacgggcaccaagctcactgcaggcattctctagaaca 396
            |||||||||| |||||||    || ||    ||||||||||||| |||||||||||  ||
Sbjct: 919  agctgtccatggcagacacttttaagg----caagctcactgcatgcattctctagggca 864

                                                                        
Query: 397  gcattatacataacacaagaaaactggaacttggtaagattctgcaggatttctgatttt 456
             |||| ||||| |||||||||||||||||||  |  || || ||||  || |||| ||||
Sbjct: 863  ccattgtacatgacacaagaaaactggaactcagctaggttttgcaatatctctgctttt 804

                                        
Query: 457  gtttcacctccttcaatttcatacgaat 484
            || ||||| |||||||| ||||| ||||
Sbjct: 803  gtctcaccgccttcaatctcataagaat 776
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>gb|AC003033.3| Arabidopsis thaliana chromosome 2 BAC T21L14 genomic sequence,
            complete sequence
          Length = 96801

 Score =  103 bits (52), Expect = 5e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                        
Query: 226  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
            ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 4494 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 4435

                                                                        
Query: 286  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
            |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 4434 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 4375

                                                                    
Query: 346  tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcatt 401
            ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||
Sbjct: 4374 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcatt 4319
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>gb|AC002334.3| Arabidopsis thaliana chromosome 2 clone F25I18 map TEn5, complete
             sequence
          Length = 93158

 Score =  103 bits (52), Expect = 5e-19
 Identities = 145/176 (82%)
 Strand = Plus / Minus

                                                                         
Query: 226   tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
             ||||||||||| || || || || |||||| | ||||| || || ||||| |||||||| 
Sbjct: 81469 tcaagagcagaagctccagagataatctcaataagctctgttgtaatagaagcttgacga 81410

                                                                         
Query: 286   gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
             |||||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 81409 gtcctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 81350

                                                                     
Query: 346   tccatagcagacatacgggcaccaagctcactgcaggcattctctagaacagcatt 401
             ||||| |||||||| |  || || | |||||| || |||||||| ||||| |||||
Sbjct: 81349 tccatggcagacattcttgctcccatctcactacatgcattctccagaaccgcatt 81294
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>gb|AF023858.1|AF023858 Solanum tuberosum ATP synthase gamma chain mRNA, nuclear gene
           encoding mitochondrial protein, partial cds
          Length = 718

 Score =  103 bits (52), Expect = 5e-19
 Identities = 100/116 (86%)
 Strand = Plus / Minus

                                                                       
Query: 244 gatatgatctcagtgagctccgtagtgatagatgcttgacgtgtcctgttgtatgtcagt 303
           |||||||||||| | ||||| || ||||||||||||||||| || |||||||| || || 
Sbjct: 475 gatatgatctcaatcagctctgtggtgatagatgcttgacgggttctgttgtaagtaaga 416

                                                                   
Query: 304 gtaagacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacat 359
           || ||||| |||||||| ||| |||||||||||||||| || ||||| ||||||||
Sbjct: 415 gtgagacgatcaagcatgtcaacggcatttctgctggaactatccatggcagacat 360
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>emb|BX820526.1|CNS0A9P1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH44ZD12 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1327

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 109/131 (83%)
 Strand = Plus / Minus

                                                                        
Query: 226  tcaagagcagaggcaccggatatgatctcagtgagctccgtagtgatagatgcttgacgt 285
            ||||||||||| || || || || || ||| ||||||| || |||||||| |||||||| 
Sbjct: 1080 tcaagagcagaagctccagagataatgtcaatgagctctgttgtgatagaagcttgacga 1021

                                                                        
Query: 286  gtcctgttgtatgtcagtgtaagacggtcaagcatttcaccggcatttctgctggagctg 345
            || ||||||||||| || || |||||||| |||||||| || || |||||||| ||||||
Sbjct: 1020 gttctgttgtatgtgagggtgagacggtcgagcatttctcctgcgtttctgcttgagctg 961

                       
Query: 346  tccatagcaga 356
            | ||| |||||
Sbjct: 960  ttcatggcaga 950
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>emb|AJ005366.1|ATA005366 Aesculus turbinata microsatellite DNA, locus AT7D8
          Length = 408

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                       
Query: 307 agacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacatacgggca 366
           |||||||||||||||||||| ||||||||||| ||||| ||||| |||||||| |  || 
Sbjct: 244 agacggtcaagcatttcaccagcatttctgcttgagctatccatggcagacatccttgct 185

                                    
Query: 367 ccaagctcactgcaggcattctcta 391
           ||  |||||||||| ||||||||||
Sbjct: 184 ccttgctcactgcaagcattctcta 160
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>gb|AY375344.1| Gossypium barbadense fiber protein Fb33 mRNA, partial cds
          Length = 1083

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 147/184 (79%)
 Strand = Plus / Minus

                                                                       
Query: 244 gatatgatctcagtgagctccgtagtgatagatgcttgacgtgtcctgttgtatgtcagt 303
           ||||| |||||| | | |||||| | ||| || |||||||| || ||||| ||||| || 
Sbjct: 784 gatataatctcaatcaactccgtggggattgaagcttgacgggttctgttatatgtaaga 725

                                                                       
Query: 304 gtaagacggtcaagcatttcaccggcatttctgctggagctgtccatagcagacatacgg 363
           || ||  | |||||||| || ||||| |||||||| ||||| |||||||||||||| |  
Sbjct: 724 gtcaggggatcaagcatgtcgccggcgtttctgcttgagctatccatagcagacatcctt 665

                                                                       
Query: 364 gcaccaagctcactgcaggcattctctagaacagcattatacataacacaagaaaactgg 423
           || ||  ||||||| || |||||||| | ||| |||||  |||| |||||||| ||||||
Sbjct: 664 gctccttgctcactacaagcattctccaaaaccgcattgaacatgacacaagagaactgg 605

               
Query: 424 aact 427
           ||||
Sbjct: 604 aact 601
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>emb|BX548171.4| Zebrafish DNA sequence from clone DKEY-152J20 in linkage group 14,
             complete sequence
          Length = 174366

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 53    aacaaaatgaaacaaggttgat 74
             ||||||||||||||||||||||
Sbjct: 76742 aacaaaatgaaacaaggttgat 76763
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>emb|BX469923.7| Zebrafish DNA sequence from clone RP71-3J3 in linkage group 5, complete
              sequence
          Length = 151639

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 53     aacaaaatgaaacaaggttgat 74
              ||||||||||||||||||||||
Sbjct: 141154 aacaaaatgaaacaaggttgat 141175
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>gb|AC006354.2| Homo sapiens PAC clone RP5-1091B14 from 7, complete sequence
          Length = 155742

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 374   cactgcaggcattctctagaa 394
             |||||||||||||||||||||
Sbjct: 28734 cactgcaggcattctctagaa 28754
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>gb|AC099791.2| Homo sapiens chromosome 1 clone RP11-430G17, complete sequence
          Length = 239704

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 139    agaaaacaaaaggctgtttcagatt 163
              ||||| |||||||||||||||||||
Sbjct: 116217 agaaaccaaaaggctgtttcagatt 116193
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>gb|AC022348.2|AC022348 Drosophila melanogaster, chromosome X, region 17E-18A, BAC clone
             BACR32F24, complete sequence
          Length = 162307

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   taaagacgatggtgtagagtt 212
             |||||||||||||||||||||
Sbjct: 60105 taaagacgatggtgtagagtt 60125
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>gb|AE003508.4| Drosophila melanogaster chromosome X, section 60 of 74 of the complete
             sequence
          Length = 290619

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 192   taaagacgatggtgtagagtt 212
             |||||||||||||||||||||
Sbjct: 96699 taaagacgatggtgtagagtt 96719
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>ref|NM_105208.1| Arabidopsis thaliana CYP96A3; heme binding / iron ion binding /
           monooxygenase/ oxygen binding AT1G65340 (CYP96A3) mRNA,
           complete cds
          Length = 1512

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 tcatcatccctcaagagcagaggc 239
           ||||||||||||||||| ||||||
Sbjct: 807 tcatcatccctcaagaggagaggc 830
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>gb|AC113078.17| Mus musculus chromosome 18, clone RP23-287G21, complete sequence
          Length = 195627

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 440    gcaggatttctgattttgtt 459
              ||||||||||||||||||||
Sbjct: 140274 gcaggatttctgattttgtt 140293
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>gb|AC163620.4| Mus musculus BAC clone RP23-117D22 from chromosome 18, complete
             sequence
          Length = 201850

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 440   gcaggatttctgattttgtt 459
             ||||||||||||||||||||
Sbjct: 13723 gcaggatttctgattttgtt 13742
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>ref|XM_585301.2| PREDICTED: Bos taurus similar to Ubiquitin-protein ligase E3C
            (LOC508513), mRNA
          Length = 4685

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  cattggaacatacaaataaa 195
            ||||||||||||||||||||
Sbjct: 4643 cattggaacatacaaataaa 4624
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>ref|XM_615804.2| PREDICTED: Bos taurus similar to SORCS receptor 1 isoform a
            (LOC535694), mRNA
          Length = 1284

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 133  cacaggagaaaacaaaaggc 152
            ||||||||||||||||||||
Sbjct: 1110 cacaggagaaaacaaaaggc 1129
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>gb|AC126032.4| Mus musculus BAC clone RP24-94B12 from chromosome 1, complete sequence
          Length = 207475

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 217   catcatccctcaagagcaga 236
             ||||||||||||||||||||
Sbjct: 71753 catcatccctcaagagcaga 71772
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>ref|XM_736259.1| Plasmodium chabaudi chabaudi hypothetical protein (PC001038.02.0)
           partial mRNA
          Length = 1398

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 452 attttgtttcacctccttcaattt 475
           ||||| ||||||||||||||||||
Sbjct: 402 attttctttcacctccttcaattt 379
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>emb|BX511153.9| Zebrafish DNA sequence from clone DKEYP-66D1 in linkage group 2,
            complete sequence
          Length = 146969

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 43   tgccactttgaacaaaatga 62
            ||||||||||||||||||||
Sbjct: 7139 tgccactttgaacaaaatga 7120
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>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 178    ttggaacatacaaataaaga 197
              ||||||||||||||||||||
Sbjct: 917496 ttggaacatacaaataaaga 917477
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>ref|XM_690687.1| PREDICTED: Danio rerio similar to Pkp3-prov protein (LOC567392),
           mRNA
          Length = 2841

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 30  agtggacatctgctgccact 49
           ||||||||||||||||||||
Sbjct: 789 agtggacatctgctgccact 770
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>gb|AC074031.16| Homo sapiens 12 BAC RP11-272K23 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163912

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    gaaaacaaaaggctgtttca 159
              ||||||||||||||||||||
Sbjct: 109507 gaaaacaaaaggctgtttca 109488
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>gb|AC010587.6| Homo sapiens chromosome 5 clone CTC-394G3, complete sequence
          Length = 94536

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 405   cataacacaagaaaactgga 424
             ||||||||||||||||||||
Sbjct: 51681 cataacacaagaaaactgga 51662
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>gb|AC010372.6| Homo sapiens chromosome 5 clone CTD-2049O16, complete sequence
          Length = 125174

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    cataacacaagaaaactgga 424
              ||||||||||||||||||||
Sbjct: 115041 cataacacaagaaaactgga 115060
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>gb|AF528573.1| Arabidopsis thaliana ecotype Lisse-2 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 tcatcatccctcaagagcagaggc 239
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
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>gb|AF528572.1| Arabidopsis thaliana ecotype Ita-0 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 tcatcatccctcaagagcagaggc 239
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
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>gb|AF528571.1| Arabidopsis thaliana ecotype Gr-3 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 tcatcatccctcaagagcagaggc 239
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
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>gb|AF528570.1| Arabidopsis thaliana ecotype Chi-1 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 tcatcatccctcaagagcagaggc 239
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
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>gb|AF528569.1| Arabidopsis thaliana ecotype Bs-1 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 tcatcatccctcaagagcagaggc 239
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
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>gb|AF528568.1| Arabidopsis thaliana ecotype Bla-1 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 tcatcatccctcaagagcagaggc 239
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
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>gb|AF528567.1| Arabidopsis thaliana ecotype Kas-1 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 tcatcatccctcaagagcagaggc 239
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
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>gb|AF528566.1| Arabidopsis thaliana ecotype Cvi-0 putative cytochrome P450
           (At1g65340) gene, partial cds
          Length = 939

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 216 tcatcatccctcaagagcagaggc 239
           ||||||||||||||||| ||||||
Sbjct: 589 tcatcatccctcaagaggagaggc 612
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>gb|AC004512.2|T8F5 Arabidopsis thaliana chromosome 1 BAC T8F5 sequence, complete sequence
          Length = 88292

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 216   tcatcatccctcaagagcagaggc 239
             ||||||||||||||||| ||||||
Sbjct: 34902 tcatcatccctcaagaggagaggc 34879
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>gb|AF087753.1|AF087753 Oryctolagus cuniculus clone Lb 80-H immunoglobulin heavy chain
           V-D-J region (IgH) gene, partial cds
          Length = 346

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 174 ttcattggaacatacaaata 193
           ||||||||||||||||||||
Sbjct: 320 ttcattggaacatacaaata 301
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>emb|AL954692.9| Zebrafish DNA sequence from clone CH211-284O19, complete sequence
          Length = 101677

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 43    tgccactttgaacaaaatga 62
             ||||||||||||||||||||
Sbjct: 95201 tgccactttgaacaaaatga 95182
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>gb|AC026911.15| Mus musculus chromosome 1, clone RP23-190F21, complete sequence
          Length = 239743

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 217    catcatccctcaagagcaga 236
              ||||||||||||||||||||
Sbjct: 195123 catcatccctcaagagcaga 195142


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,007,016
Number of Sequences: 3902068
Number of extensions: 6007016
Number of successful extensions: 140521
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 140330
Number of HSP's gapped (non-prelim): 188
length of query: 503
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 481
effective length of database: 17,147,199,772
effective search space: 8247803090332
effective search space used: 8247803090332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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