>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 286     cccgcacggtgtcctcgtcgagcag 310
               |||||||| ||||||||||||||||
Sbjct: 2299591 cccgcacgctgtcctcgtcgagcag 2299567

>gb|AC159999.6| Mus musculus BAC clone RP23-6P9 from chromosome 10, complete sequence
          Length = 216489

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 155   ctttcctcaaggccactcgca 175
             |||||||||||||||||||||
Sbjct: 50915 ctttcctcaaggccactcgca 50895

>ref|XM_750702.1| Aspergillus fumigatus Af293 cell wall glycosyl hydrolase family 88
           YteR (Afu2g14630) partial mRNA
          Length = 1155

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 351 gacttgatgtaggtgaagtag 371
           |||||||||||||||||||||
Sbjct: 215 gacttgatgtaggtgaagtag 195

>emb|AL157830.10| Human DNA sequence from clone RP11-332M12 on chromosome 9p24.1-24.3,
              complete sequence
          Length = 168621

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 36     ataccatatttcataaaactg 56
              |||||||||||||||||||||
Sbjct: 142796 ataccatatttcataaaactg 142776

>emb|BX957342.5| Zebrafish DNA sequence from clone CH211-120P12 in linkage group 13,
             complete sequence
          Length = 182888

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    ttcataaaactgaatatggaa 65
             |||||||||||||||||||||
Sbjct: 12900 ttcataaaactgaatatggaa 12920

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 287     ccgcacggtgtcctcgtcgag 307
               |||||||||||||||||||||
Sbjct: 5056032 ccgcacggtgtcctcgtcgag 5056012

>gb|AC005687.1| Arabidopsis thaliana BAC F1I21 from chromosome 1, near 59 cM, complete
             sequence
          Length = 129271

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    atatttcataaaactgaata 60
             ||||||||||||||||||||
Sbjct: 26354 atatttcataaaactgaata 26335

>ref|NM_194108.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1533

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 429 ccgtcgacggggtcgaaggggaagtcgg 456
           ||||||||||||  ||||||||||||||
Sbjct: 302 ccgtcgacggggaggaaggggaagtcgg 275

>ref|XM_647072.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (129.t00007)
            partial mRNA
          Length = 1479

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 35   aataccatatttcataaaac 54
            ||||||||||||||||||||
Sbjct: 1435 aataccatatttcataaaac 1454

>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 297   tcctcgtcgagcagctcgac 316
             ||||||||||||||||||||
Sbjct: 63737 tcctcgtcgagcagctcgac 63718

>emb|X73598.1|PPPUPB P.putida pupB gene for ferric-pseudobactin receptor
          Length = 2652

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 299 ctcgtcgagcagctcgacgc 318
           ||||||||||||||||||||
Sbjct: 551 ctcgtcgagcagctcgacgc 570

>gb|AC015641.9| Homo sapiens chromosome 8, clone RP11-45O16, complete sequence
          Length = 154580

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 36    ataccatatttcataaaact 55
             ||||||||||||||||||||
Sbjct: 21995 ataccatatttcataaaact 22014

>ref|NM_077947.1| Caenorhabditis elegans F16B12.5 (F16B12.5) mRNA, complete cds
          Length = 1185

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  aaattctattaacaatacca 41
           ||||||||||||||||||||
Sbjct: 761 aaattctattaacaatacca 780

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7,
              complete sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 429    ccgtcgacggggtcgaaggggaagtcgg 456
              ||||||||||||  ||||||||||||||
Sbjct: 684772 ccgtcgacggggaggaaggggaagtcgg 684745

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 443     gaaggggaagtcggcgctgcggta 466
               |||||||||||||||| |||||||
Sbjct: 2434780 gaaggggaagtcggcggtgcggta 2434803

>gb|AC135352.6| Homo sapiens chromosome 8, clone RP11-369K16, complete sequence
          Length = 133950

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 36     ataccatatttcataaaact 55
              ||||||||||||||||||||
Sbjct: 133031 ataccatatttcataaaact 133050

>dbj|AP003874.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1118_G09
          Length = 115815

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 429   ccgtcgacggggtcgaaggggaagtcgg 456
             ||||||||||||  ||||||||||||||
Sbjct: 23303 ccgtcgacggggaggaaggggaagtcgg 23276

>dbj|AP005244.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1513_F02
          Length = 126845

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 429  ccgtcgacggggtcgaaggggaagtcgg 456
            ||||||||||||  ||||||||||||||
Sbjct: 4579 ccgtcgacggggaggaaggggaagtcgg 4552

>gb|AC114618.9| Mus musculus chromosome 3, clone RP24-86C15, complete sequence
          Length = 209209

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    aataccatatttcataaaac 54
             ||||||||||||||||||||
Sbjct: 65847 aataccatatttcataaaac 65866

>gb|AF099810.1|AF099810 Homo sapiens neurexin III-alpha gene, partial cds
          Length = 193824

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     ggaccatgagggacccaaaa 87
              ||||||||||||||||||||
Sbjct: 132184 ggaccatgagggacccaaaa 132165

>emb|Z81064.1|CEF16B12 Caenorhabditis elegans Cosmid F16B12, complete sequence
          Length = 27576

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    aaattctattaacaatacca 41
             ||||||||||||||||||||
Sbjct: 15993 aaattctattaacaatacca 16012


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,235,531
Number of Sequences: 3902068
Number of extensions: 3235531
Number of successful extensions: 64220
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 63954
Number of HSP's gapped (non-prelim): 266
length of query: 505
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 483
effective length of database: 17,147,199,772
effective search space: 8282097489876
effective search space used: 8282097489876
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)