Clone Name | rbart32a01 |
---|---|
Clone Library Name | barley_pub |
>SNAA_SOLTU (Q9M5P8) Alpha-soluble NSF attachment protein (Alpha-SNAP)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 288 Score = 174 bits (440), Expect = 2e-43 Identities = 86/122 (70%), Positives = 99/122 (81%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 YPKA EIFE+IAR S+NNNLLKY VR LLNAGICQLC+ D V I N+LERYQE+DPTFS Sbjct: 167 YPKAIEIFEEIARHSVNNNLLKYGVREHLLNAGICQLCKGDVVPINNALERYQELDPTFS 226 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELKKQXXXXXD 147 GTRE KLL DLAA++D+ DVAKFTDA+KE+D MT+LD W+TTLLLR K LK + D Sbjct: 227 GTRECKLLVDLAAAIDEEDVAKFTDAVKEYDSMTQLDAWRTTLLLRVKETLKAKELEEDD 286 Query: 146 LT 141 LT Sbjct: 287 LT 288
>SNAA_VITVI (P93798) Alpha-soluble NSF attachment protein (Alpha-SNAP)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 289 Score = 173 bits (438), Expect = 3e-43 Identities = 84/122 (68%), Positives = 99/122 (81%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y KA +I+EDI R S+NNNLLKY V+G LLNAGICQLC+ D VAI N+L+RYQE+DPTFS Sbjct: 168 YQKAIQIYEDIGRPSLNNNLLKYGVKGHLLNAGICQLCKGDVVAITNALDRYQEMDPTFS 227 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELKKQXXXXXD 147 GTREYKLL DLAA++D+ DV KFTDA+KEFD MT+LD WKTTLLLR K +K + D Sbjct: 228 GTREYKLLVDLAAAVDEEDVVKFTDAVKEFDSMTQLDAWKTTLLLRVKEAIKAKELEEDD 287 Query: 146 LT 141 LT Sbjct: 288 LT 289
>SNAA2_ARATH (Q9SPE6) Alpha-soluble NSF attachment protein 2 (Alpha-SNAP2)| (N-ethylmaleimide-sensitive factor attachment protein, alpha 2) Length = 289 Score = 162 bits (410), Expect = 5e-40 Identities = 77/122 (63%), Positives = 98/122 (80%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y KA +I+EDIAR S+NNNLLKY V+G LL AG+C LC+AD V+I N+LE+YQ++DPTF+ Sbjct: 168 YEKAIKIYEDIARHSLNNNLLKYGVKGHLLTAGMCHLCKADVVSITNALEKYQDLDPTFT 227 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELKKQXXXXXD 147 GTRE K LADLA+++D+ D+AKFTD +KEFD MT LD WKTT+LLR K +LK + D Sbjct: 228 GTRECKFLADLASAIDEEDIAKFTDVVKEFDSMTPLDSWKTTMLLRVKEKLKAKELEEDD 287 Query: 146 LT 141 LT Sbjct: 288 LT 289
>SNAA1_ARATH (Q9LXZ5) Alpha-soluble NSF attachment protein 1 (Alpha-SNAP1)| (N-ethylmaleimide-sensitive factor attachment protein, alpha 1) Length = 381 Score = 115 bits (287), Expect = 9e-26 Identities = 53/85 (62%), Positives = 69/85 (81%) Frame = -3 Query: 473 ARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFSGTREYKLLADL 294 AR S+NN LLKY V+G LL AG+C LC+AD V+I N+LE+YQ++DPTFSGTRE K LADL Sbjct: 230 ARHSLNNKLLKYGVKGHLLTAGMCHLCKADVVSITNALEKYQDLDPTFSGTRECKFLADL 289 Query: 293 AASMDDGDVAKFTDAIKEFDGMTRL 219 A+++D+ D+AKFTD KE D ++ L Sbjct: 290 ASAIDEEDIAKFTDVSKEIDSVSPL 314
>SEC17_SCHPO (Q9P4X4) Probable vesicular-fusion protein sec17 homolog| Length = 289 Score = 108 bits (271), Expect = 6e-24 Identities = 49/113 (43%), Positives = 76/113 (67%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y A FE +AR S+ NNLLK+SV+ LL AG+C + D +A + +LE + EIDP+F+ Sbjct: 171 YSLAIRKFEQVARASVQNNLLKWSVKDYLLKAGLCYMANGDEIATRRALEHFLEIDPSFA 230 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELKK 168 TREY+LL DL +++ D F D + +D +++LD WKTT+LL+ K+ +++ Sbjct: 231 STREYQLLKDLQDTIEASDANMFADKVFTYDQLSKLDSWKTTILLKIKSSIQE 283
>SEC17_NEUCR (Q9P6A5) Probable vesicular-fusion protein sec17 homolog| Length = 292 Score = 100 bits (249), Expect = 2e-21 Identities = 46/110 (41%), Positives = 69/110 (62%) Frame = -3 Query: 497 ATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFSGTR 318 A E FE +A S+ NNL++YSV+ L AG+C L D V Q ++ +Y E DP+F+G R Sbjct: 177 AIEKFEKVAEASLGNNLMRYSVKEYFLKAGLCSLATKDMVTAQRNITKYAEKDPSFTGQR 236 Query: 317 EYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELKK 168 EY+LL DL + + ++ F D + +D M+RLD WK +LL+ KN ++ Sbjct: 237 EYQLLVDLLEAASNNNLEMFQDKLAAYDKMSRLDDWKAAVLLQIKNNFEE 286
>SNAB_BOVIN (P81126) Beta-soluble NSF attachment protein (SNAP-beta)| (N-ethylmaleimide-sensitive factor attachment protein, beta) Length = 298 Score = 90.9 bits (224), Expect = 2e-18 Identities = 45/112 (40%), Positives = 70/112 (62%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y KA EIFE I +++N LLKYS + A +C D + + +LE+Y+E+ P F+ Sbjct: 178 YQKAIEIFEQIGANTMDNPLLKYSAKDYFFKAALCHFI-VDELNAKLALEKYEEMFPAFT 236 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELK 171 +RE KLL L + ++ + +T+A+KEFD ++RLD W TT+LLR K ++ Sbjct: 237 DSRECKLLKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTTMLLRIKKSIQ 288
>SNAP_DROME (Q23983) Soluble NSF attachment protein (SNAP)| (N-ethylmaleimide-sensitive factor attachment protein) Length = 292 Score = 90.1 bits (222), Expect = 3e-18 Identities = 41/108 (37%), Positives = 70/108 (64%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y KA I+E +A S+ ++LLKYS + A +C L D + Q+++E+Y + P F Sbjct: 176 YEKAISIYEQVAASSLESSLLKYSAKEYFFRAALCHLS-VDLLNAQHAIEKYAQQYPAFQ 234 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAK 183 +RE+KL+ L ++++ ++ FT+A+K++D ++RLD W TT+LLR K Sbjct: 235 DSREFKLIKVLCENLEEQNIEGFTEAVKDYDSISRLDQWYTTILLRIK 282
>SNAB_MOUSE (P28663) Beta-soluble NSF attachment protein (SNAP-beta)| (N-ethylmaleimide-sensitive factor attachment protein, beta) (Brain protein I47) Length = 298 Score = 89.4 bits (220), Expect = 5e-18 Identities = 43/112 (38%), Positives = 70/112 (62%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y KA EI+E + +++N LLKYS + A +C D + + +LE+Y+E+ P F+ Sbjct: 178 YQKAIEIYEQVGANTMDNPLLKYSAKDYFFKAALCHFI-VDELNAKLALEKYEEMFPAFT 236 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELK 171 +RE KLL L + ++ + +T+A+KEFD ++RLD W TT+LLR K ++ Sbjct: 237 DSRECKLLKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTTMLLRIKKSIQ 288
>SNAB_HUMAN (Q9H115) Beta-soluble NSF attachment protein (SNAP-beta)| (N-ethylmaleimide-sensitive factor attachment protein, beta) Length = 298 Score = 89.4 bits (220), Expect = 5e-18 Identities = 43/112 (38%), Positives = 70/112 (62%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y KA EI+E + +++N LLKYS + A +C D + + +LE+Y+E+ P F+ Sbjct: 178 YQKAIEIYEQVGANTMDNPLLKYSAKDYFFKAALCHFI-VDELNAKLALEKYEEMFPAFT 236 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELK 171 +RE KLL L + ++ + +T+A+KEFD ++RLD W TT+LLR K ++ Sbjct: 237 DSRECKLLKKLLEAHEEQNSEAYTEAVKEFDSISRLDQWLTTMLLRIKKSIQ 288
>SNAA_MOUSE (Q9DB05) Alpha-soluble NSF attachment protein (SNAP-alpha)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 295 Score = 89.0 bits (219), Expect = 7e-18 Identities = 40/112 (35%), Positives = 72/112 (64%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y KA +I+E + ++++ LLKYS + A +C C D + + ++++Y+E+ P FS Sbjct: 178 YQKAIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFC-IDMLNAKLAVQKYEELFPAFS 236 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELK 171 +RE KL+ L + ++ +V +T+A+KE+D ++RLD W TT+LLR K ++ Sbjct: 237 DSRECKLMKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQ 288
>SNAA_RAT (P54921) Alpha-soluble NSF attachment protein (SNAP-alpha)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 295 Score = 87.8 bits (216), Expect = 2e-17 Identities = 39/112 (34%), Positives = 72/112 (64%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y KA +I+E + ++++ LLKYS + A +C C D + + ++++Y+E+ P FS Sbjct: 178 YQKAIDIYEQVGTSAMDSPLLKYSAKDYFFKAALCHFC-IDMLNAKLAVQKYEELFPAFS 236 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELK 171 +RE KL+ L + ++ +V +T+++KE+D ++RLD W TT+LLR K ++ Sbjct: 237 DSRECKLMKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQ 288
>SNAA_HUMAN (P54920) Alpha-soluble NSF attachment protein (SNAP-alpha)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 295 Score = 87.4 bits (215), Expect = 2e-17 Identities = 39/112 (34%), Positives = 71/112 (63%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y KA +I+E + +++ LLKYS + A +C C D + + ++++Y+E+ P FS Sbjct: 178 YQKAIDIYEQVGTNAMDTPLLKYSAKDYFFKAALCHFC-IDMLNAKLAVQKYEELFPAFS 236 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELK 171 +RE KL+ L + ++ +V +T+++KE+D ++RLD W TT+LLR K ++ Sbjct: 237 DSRECKLMKKLLEAHEEQNVDSYTESVKEYDSISRLDQWLTTMLLRIKKTIQ 288
>SNAA_BOVIN (P81125) Alpha-soluble NSF attachment protein (SNAP-alpha)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) Length = 295 Score = 86.7 bits (213), Expect = 3e-17 Identities = 39/112 (34%), Positives = 71/112 (63%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y KA +I+E + ++++ LLKYS + A +C C D + + ++++Y+E+ P FS Sbjct: 178 YQKAIDIYEQVGTNAMDSPLLKYSAKDYFFKAALCHFC-IDMLNAKLAVQKYEELFPAFS 236 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELK 171 +RE K + L + ++ +V +T+A+KE+D ++RLD W TT+LLR K ++ Sbjct: 237 DSRECKRIKKLLEAHEEQNVDSYTEAVKEYDSISRLDQWLTTMLLRIKKTIQ 288
>SEC17_COPCI (P78603) Vesicular-fusion protein SEC17| Length = 285 Score = 85.9 bits (211), Expect = 6e-17 Identities = 43/114 (37%), Positives = 70/114 (61%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 +P+A ++E +A S+ +NL KYSV+ L + +C D V + + ++Y D TF Sbjct: 172 FPQAITLYERVADHSLTSNLTKYSVKEYWLKSLLC----TDIVTARRNAQKYIGQDNTFV 227 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELKKQ 165 GTRE+K L ++D GDV +T A+ EFD +T+LD WKT +LL+ K ++++ Sbjct: 228 GTREFKFADALMEAVDAGDVGAYTAAVVEFDRITKLDNWKTAILLKIKRGIQEE 281
>SEC17_ASHGO (Q75D68) Vesicular-fusion protein SEC17| Length = 291 Score = 85.5 bits (210), Expect = 8e-17 Identities = 42/111 (37%), Positives = 66/111 (59%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y A E++ I S+ N L ++S+R L +C L +DTVA + +L+ + D +F Sbjct: 173 YLAAAELYRKIISNSVGNRLSQWSLRDYYLKLCLCFLAASDTVAAEKTLQEALQEDSSFH 232 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNEL 174 G+RE+ LLA + + GDV F++ + EFD ++LD WKTT+LLR K + Sbjct: 233 GSREHDLLAAIIEDVKQGDVEAFSNHVFEFDKFSKLDKWKTTVLLRVKTSI 283
>SEC17_YEAST (P32602) Alpha-soluble NSF attachment protein (SNAP-alpha)| (N-ethylmaleimide-sensitive factor attachment protein, alpha) (Vesicular-fusion protein SEC17) (alpha-SNAP chaperone) Length = 291 Score = 84.7 bits (208), Expect = 1e-16 Identities = 39/114 (34%), Positives = 67/114 (58%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 Y +A++I+ + + S+ N L ++S++ L G+CQL D VA +L+ Q DP F+ Sbjct: 173 YIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFA 232 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELKKQ 165 +RE L L ++++GD + ++ KEFD RLD WK T+L + K +++Q Sbjct: 233 DSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNFMRLDKWKITILNKIKESIQQQ 286
>SEC17_PICPA (Q9P4D0) Vesicular-fusion protein SEC17| Length = 294 Score = 72.4 bits (176), Expect = 7e-13 Identities = 38/110 (34%), Positives = 61/110 (55%) Frame = -3 Query: 500 KATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFSGT 321 KA E +E IA++S+NN+L K+S++ A +C+L + LER+ DPTF T Sbjct: 176 KAAESYERIAKESLNNSLAKWSLKDYFFKAILCRLALNGYPSASALLERFVSWDPTFEKT 235 Query: 320 REYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELK 171 R Y+ L + +GD A E+D ++RLD +K +L + KN ++ Sbjct: 236 RGYEFALKLVDGLKEGDPDIIASASHEYDQISRLDNFKVKILNKIKNNIR 285
>V011_FOWPV (Q9J5J0) Soluble NSF attachment protein homolog FPV011| Length = 278 Score = 61.6 bits (148), Expect = 1e-09 Identities = 34/105 (32%), Positives = 58/105 (55%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 + +A +IFE + +N L KY R LL A +C LC +D + SL++Y++I P F Sbjct: 163 FDRAGKIFEQVGYNRMNTMLSKYESRHQLLYAIMCYLC-SDVSRAKRSLDKYKDIFPAFK 221 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLL 192 +E K + + A+ + ++ FT AI+E+D +D ++LL Sbjct: 222 DFKECKFIEKILAACETKNIETFTSAIEEYDHGNTIDEALMSMLL 266
>V033_FOWPV (O90758) Soluble NSF attachment protein homolog FPV033| Length = 287 Score = 52.4 bits (124), Expect = 7e-07 Identities = 32/114 (28%), Positives = 56/114 (49%) Frame = -3 Query: 506 YPKATEIFEDIARQSINNNLLKYSVRGILLNAGICQLCRADTVAIQNSLERYQEIDPTFS 327 + KA ++E I + +LK+ ++ L A +C C D ++ + Y E+ F Sbjct: 175 FDKAASVYEQIGIICMRLPILKHRIKDQFLKAILCHFCIGDK-DMRLIVGYYTELYAQFI 233 Query: 326 GTREYKLLADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAKNELKKQ 165 REY L+ + S D ++ DA++E+ +TRLD T +LL K ++ Q Sbjct: 234 DYREYTLIMKVVESCDTCNLDILVDALREYGSVTRLDYILTIMLLEIKKNIQTQ 287
>IPO9_MOUSE (Q91YE6) Importin-9 (Importin 9a) (Imp9a) (Importin 9b) (Imp9b)| (Ran-binding protein 9) (RanBP9) Length = 1040 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/62 (33%), Positives = 34/62 (54%) Frame = +1 Query: 235 SNSLMASVNLATSPSSIDAARSAKSLYSRVPEKVGSISWYLSNEFCIATVSALHSWQMPA 414 +N ++A +NL+ SP + A A S ++ ++S L +F ATVS LH Q P+ Sbjct: 478 TNVILADLNLSASPFLLGRALWAASRFTV------AMSPELIQQFLQATVSGLHETQPPS 531 Query: 415 LR 420 +R Sbjct: 532 VR 533
>IPO9_HUMAN (Q96P70) Importin-9 (Imp9) (Ran-binding protein 9) (RanbP9)| Length = 1040 Score = 31.6 bits (70), Expect = 1.3 Identities = 21/62 (33%), Positives = 34/62 (54%) Frame = +1 Query: 235 SNSLMASVNLATSPSSIDAARSAKSLYSRVPEKVGSISWYLSNEFCIATVSALHSWQMPA 414 +N ++A +NL+ SP + A A S ++ ++S L +F ATVS LH Q P+ Sbjct: 478 TNVILADLNLSVSPFLLGRALWAASRFTV------AMSPELIQQFLQATVSGLHETQPPS 531 Query: 415 LR 420 +R Sbjct: 532 VR 533
>DOPO_HUMAN (P09172) Dopamine beta-hydroxylase precursor (EC 1.14.17.1)| (Dopamine beta-monooxygenase) Length = 603 Score = 30.4 bits (67), Expect = 2.9 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = -3 Query: 302 ADLAASMDDGDVAKFTDAIKEFDGMTRLDPWKTTLLLRAK 183 ADL DGD A F DA + G LDP + LL+ + Sbjct: 84 ADLVVLWTDGDTAYFADAWSDQKGQIHLDPQQDYQLLQVQ 123
>TRFM_RABIT (O97490) Melanotransferrin precursor (Membrane-bound| transferrin-like protein p97) Length = 736 Score = 30.0 bits (66), Expect = 3.8 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%) Frame = -3 Query: 407 ICQLCRADT----VAIQNSLERYQEIDPTFSGTREYKLLADLAASMDDGDVA--KFTDAI 246 +C+LCR DT V ++ LERY + +SG ++ LA+ A GDVA K + + Sbjct: 185 LCRLCRGDTSGEGVCDKSPLERYYD----YSGA--FRCLAEGA-----GDVAFVKHSTVL 233 Query: 245 KEFDGMTRLDPWKTTLLLR 189 + DG T L W L+ R Sbjct: 234 ENTDGRT-LPSWGHMLMSR 251
>CYB_HYPTE (Q8LZ94) Cytochrome b| Length = 378 Score = 29.3 bits (64), Expect = 6.5 Identities = 16/55 (29%), Positives = 28/55 (50%) Frame = +1 Query: 301 AKSLYSRVPEKVGSISWYLSNEFCIATVSALHSWQMPALRRMPLTLYFSRLLLID 465 A ++ +P K+G + L + + V LH+ ++ AL PLT + LL+ D Sbjct: 277 AYAILRSIPNKLGGVLALLFSILILMLVPVLHTSKLRALTFRPLTQFLFWLLIAD 331
>CYB_PONPY (Q35614) Cytochrome b| Length = 380 Score = 29.3 bits (64), Expect = 6.5 Identities = 14/55 (25%), Positives = 29/55 (52%) Frame = +1 Query: 301 AKSLYSRVPEKVGSISWYLSNEFCIATVSALHSWQMPALRRMPLTLYFSRLLLID 465 A ++ VP K+G + + + + T+ ALH+ + ++ PL+ + LL+ D Sbjct: 277 AYAILRSVPNKLGGVMALMLSILILTTIPALHTSKQQSMTFRPLSQFLYWLLITD 331
>CYB_PONPP (P92723) Cytochrome b| Length = 380 Score = 29.3 bits (64), Expect = 6.5 Identities = 14/55 (25%), Positives = 29/55 (52%) Frame = +1 Query: 301 AKSLYSRVPEKVGSISWYLSNEFCIATVSALHSWQMPALRRMPLTLYFSRLLLID 465 A ++ VP K+G + + + + T+ ALH+ + ++ PL+ + LL+ D Sbjct: 277 AYAILRSVPNKLGGVMALMLSILILTTIPALHTSKQQSMTFRPLSQFLYWLLITD 331
>CRADD_HUMAN (P78560) Death domain-containing protein CRADD (Caspase and RIP| adapter with death domain) (RIP-associated protein with a death domain) Length = 199 Score = 28.9 bits (63), Expect = 8.5 Identities = 21/83 (25%), Positives = 37/83 (44%) Frame = -3 Query: 425 ILLNAGICQLCRADTVAIQNSLERYQEIDPTFSGTREYKLLADLAASMDDGDVAKFTDAI 246 +L+ + Q + + +N + QEI+ +G R+ LL D+ S F D++ Sbjct: 20 VLVEGLVLQYLYQEGILTENHI---QEINAQTTGLRKTMLLLDILPSRGPKAFDTFLDSL 76 Query: 245 KEFDGMTRLDPWKTTLLLRAKNE 177 +EF PW L +A+ E Sbjct: 77 QEF-------PWVREKLKKAREE 92 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 67,385,990 Number of Sequences: 219361 Number of extensions: 1206670 Number of successful extensions: 4797 Number of sequences better than 10.0: 28 Number of HSP's better than 10.0 without gapping: 4407 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4787 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3754426130 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)