ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart32a01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY247211.1| Hordeum vulgare subsp. vulgare alpha-SNAP mRNA, p... 575 e-161
2gb|AY104060.1| Zea mays PCO133307 mRNA sequence 319 5e-84
3ref|XM_481268.1| Oryza sativa (japonica cultivar-group), mRNA 222 9e-55
4dbj|AK100935.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 9e-55
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
6dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
7dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic D... 92 2e-15
8gb|BT018828.1| Zea mays clone EL01N0551C05.d mRNA sequence 74 5e-10
9gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome 46 0.11
10gb|AY116074.1| Takifugu rubripes RHBG mRNA, complete cds 44 0.44
11gb|AY353247.1| Oryzias latipes RhBG-like protein mRNA, complete cds 44 0.44
12ref|NM_001032646.1| Takifugu rubripes RhBG protein (RhBG), mRNA 44 0.44
13gb|AY865614.1| Tetraodon nigroviridis Rh type B glycoprotein mRN... 44 0.44
14dbj|AP006865.1| Lotus japonicus genomic DNA, chromosome 2, clone... 44 0.44
15emb|AL358072.21| Human DNA sequence from clone RP11-188D8 on chr... 42 1.7
16dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 42 1.7
17gb|AC122309.5| Mus musculus BAC clone RP23-293G2 from chromosome... 40 6.9
18ref|XM_641234.1| Dictyostelium discoideum hypothetical protein (... 40 6.9
19ref|XM_638842.1| Dictyostelium discoideum hypothetical protein (... 40 6.9
20ref|XM_629931.1| Dictyostelium discoideum hypothetical protein (... 40 6.9
21ref|XM_516687.1| PREDICTED: Pan troglodytes similar to KIAA0036 ... 40 6.9
22ref|XM_615634.2| PREDICTED: Bos taurus similar to forkhead box O... 40 6.9
23gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.9
24ref|XM_721492.1| Plasmodium yoelii yoelii str. 17XNL mature-para... 40 6.9
25ref|XM_724561.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 6.9
26ref|XM_846130.1| PREDICTED: Canis familiaris similar to small an... 40 6.9
27ref|XM_858213.1| PREDICTED: Canis familiaris similar to small an... 40 6.9
28ref|XM_858189.1| PREDICTED: Canis familiaris similar to small an... 40 6.9
29ref|XM_858167.1| PREDICTED: Canis familiaris similar to small an... 40 6.9
30ref|XM_858145.1| PREDICTED: Canis familiaris similar to small an... 40 6.9
31ref|XM_858127.1| PREDICTED: Canis familiaris similar to small an... 40 6.9
32ref|XM_782002.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.9
33emb|AL929588.11| Mouse DNA sequence from clone RP23-87L24 on chr... 40 6.9
34dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.9
35gb|AC154545.2| Mus musculus BAC clone RP23-431G16 from chromosom... 40 6.9
36gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041... 40 6.9
37gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genom... 40 6.9
38gb|AC084854.11| Homo sapiens chromosome 15, clone CTD-3006F8, co... 40 6.9
39emb|Y16564.1|PBY16564 Phyllomedusa bicolor mRNA for preprodermas... 40 6.9
40emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 i... 40 6.9
41gb|AC107884.15| Homo sapiens chromosome 11, clone CTD-2516F10, c... 40 6.9 
>gb|AY247211.1| Hordeum vulgare subsp. vulgare alpha-SNAP mRNA, partial cds
          Length = 336

 Score =  575 bits (290), Expect = e-161
 Identities = 290/290 (100%)
 Strand = Plus / Minus

                                                                       
Query: 222 gcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctccgtcgtc 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 gcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctccgtcgtc 277

                                                                       
Query: 282 cattgatgcagcaagatcagctaaaagtttgtattcgcgagttcctgagaaagtcggatc 341
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 cattgatgcagcaagatcagctaaaagtttgtattcgcgagttcctgagaaagtcggatc 217

                                                                       
Query: 342 aatttcctggtatctctccaacgaattttgtatagcaacggtatcagctctacatagttg 401
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 aatttcctggtatctctccaacgaattttgtatagcaacggtatcagctctacatagttg 157

                                                                       
Query: 402 gcagatgccagcattaaggaggatgcctctgacactatacttcagcagattgttgttaat 461
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 156 gcagatgccagcattaaggaggatgcctctgacactatacttcagcagattgttgttaat 97

                                                             
Query: 462 tgattgacgagcaatatcttcaaaaatctccgttgcctttgggtagtgtt 511
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96  tgattgacgagcaatatcttcaaaaatctccgttgcctttgggtagtgtt 47
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>gb|AY104060.1| Zea mays PCO133307 mRNA sequence
          Length = 1368

 Score =  319 bits (161), Expect = 5e-84
 Identities = 311/361 (86%)
 Strand = Plus / Minus

                                                                        
Query: 151  tcctcatcatcctcttgtttcttcagttcattctttgccctcagcagcagtgtcgttttc 210
            |||||||| ||||| | ||||||||| || ||||| ||||| |||||||| || ||||||
Sbjct: 1052 tcctcatcgtcctcctttttcttcagctcgttcttcgccctgagcagcagggtggttttc 993

                                                                        
Query: 211  caaggatccaggcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaaca 270
            ||||||||||| ||||||||||  |||||||| ||||| |||||||| ||||||||||||
Sbjct: 992  caaggatccagacgtgtcatgctatcaaattctttgattgcatcagtgaatttggcaaca 933

                                                                        
Query: 271  tctccgtcgtccattgatgcagcaagatcagctaaaagtttgtattcgcgagttcctgag 330
            || || || ||||| ||||||||||||||||||||||| |||||||| || || || |||
Sbjct: 932  tccccttcatccatagatgcagcaagatcagctaaaagcttgtattcacgtgtcccagag 873

                                                                        
Query: 331  aaagtcggatcaatttcctggtatctctccaacgaattttgtatagcaacggtatcagct 390
            |||||||| |||||||||||||||| |||||| ||||||   || ||||  | |||| ||
Sbjct: 872  aaagtcgggtcaatttcctggtatcgctccaatgaatttgtgatggcaataggatcacct 813

                                                                        
Query: 391  ctacatagttggcagatgccagcattaaggaggatgcctctgacactatacttcagcaga 450
            ||||||||||| ||||||||||||||||| || || ||||||||||||||||| || |||
Sbjct: 812  ctacatagttgacagatgccagcattaagaagaattcctctgacactatacttaagaaga 753

                                                                        
Query: 451  ttgttgttaattgattgacgagcaatatcttcaaaaatctccgttgcctttgggtagtgt 510
            |||||||| ||||| |||||||| ||  ||||||| ||||| ||||| |||||||| |||
Sbjct: 752  ttgttgttgattgactgacgagcgatcgcttcaaatatctcagttgcttttgggtactgt 693

             
Query: 511  t 511
            |
Sbjct: 692  t 692
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>ref|XM_481268.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1292

 Score =  222 bits (112), Expect = 9e-55
 Identities = 301/364 (82%)
 Strand = Plus / Minus

                                                                        
Query: 137  cttaggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagca 196
            ||||||||||||||||||| |||||||| | ||||||||| |||||||||||||| || |
Sbjct: 1008 cttaggttagatcatcctcgtcatcctcctttttcttcagctcattctttgccctgagga 949

                                                                        
Query: 197  gcagtgtcgttttccaaggatccaggcgtgtcatgccgtcaaattccttgatggcatcag 256
            | || || |||||||| || ||||| |||||||||| |||||||||||| ||||||||||
Sbjct: 948  ggagggttgttttccaggggtccagacgtgtcatgctgtcaaattccttaatggcatcag 889

                                                                        
Query: 257  taaatttggcaacatctccgtcgtccattgatgcagcaagatcagctaaaagtttgtatt 316
            | || |||||||||||||| || ||||| | |||||||||||||| |||||| |||||||
Sbjct: 888  tgaacttggcaacatctccttcctccatagctgcagcaagatcagataaaagcttgtatt 829

                                                                        
Query: 317  cgcgagttcctgagaaagtcggatcaatttcctggtatctctccaacgaattttgtatag 376
            | || || || ||||| || || ||||| ||||| |||| |||||  ||||||   ||||
Sbjct: 828  ctcgtgtccccgagaatgttgggtcaatatcctgatatcgctccattgaatttgtgatag 769

                                                                        
Query: 377  caacggtatcagctctacatagttggcagatgccagcattaaggaggatgcctctgacac 436
            ||||   |||| |||| ||||| || || ||||| || || ||||| || ||||||||||
Sbjct: 768  caacaacatcacctctgcatagctgacaaatgcctgcgttgaggagaatacctctgacac 709

                                                                        
Query: 437  tatacttcagcagattgttgttaattgattgacgagcaatatcttcaaaaatctccgttg 496
            | ||||| || ||||| ||||| |||  ||| ||||||||  ||||||| |||||  |||
Sbjct: 708  tgtacttaagaagattattgttgatttgttggcgagcaattgcttcaaatatctcatttg 649

                
Query: 497  cctt 500
            ||||
Sbjct: 648  cctt 645
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>dbj|AK100935.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023136I24, full
            insert sequence
          Length = 1292

 Score =  222 bits (112), Expect = 9e-55
 Identities = 301/364 (82%)
 Strand = Plus / Minus

                                                                        
Query: 137  cttaggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagca 196
            ||||||||||||||||||| |||||||| | ||||||||| |||||||||||||| || |
Sbjct: 1008 cttaggttagatcatcctcgtcatcctcctttttcttcagctcattctttgccctgagga 949

                                                                        
Query: 197  gcagtgtcgttttccaaggatccaggcgtgtcatgccgtcaaattccttgatggcatcag 256
            | || || |||||||| || ||||| |||||||||| |||||||||||| ||||||||||
Sbjct: 948  ggagggttgttttccaggggtccagacgtgtcatgctgtcaaattccttaatggcatcag 889

                                                                        
Query: 257  taaatttggcaacatctccgtcgtccattgatgcagcaagatcagctaaaagtttgtatt 316
            | || |||||||||||||| || ||||| | |||||||||||||| |||||| |||||||
Sbjct: 888  tgaacttggcaacatctccttcctccatagctgcagcaagatcagataaaagcttgtatt 829

                                                                        
Query: 317  cgcgagttcctgagaaagtcggatcaatttcctggtatctctccaacgaattttgtatag 376
            | || || || ||||| || || ||||| ||||| |||| |||||  ||||||   ||||
Sbjct: 828  ctcgtgtccccgagaatgttgggtcaatatcctgatatcgctccattgaatttgtgatag 769

                                                                        
Query: 377  caacggtatcagctctacatagttggcagatgccagcattaaggaggatgcctctgacac 436
            ||||   |||| |||| ||||| || || ||||| || || ||||| || ||||||||||
Sbjct: 768  caacaacatcacctctgcatagctgacaaatgcctgcgttgaggagaatacctctgacac 709

                                                                        
Query: 437  tatacttcagcagattgttgttaattgattgacgagcaatatcttcaaaaatctccgttg 496
            | ||||| || ||||| ||||| |||  ||| ||||||||  ||||||| |||||  |||
Sbjct: 708  tgtacttaagaagattattgttgatttgttggcgagcaattgcttcaaatatctcatttg 649

                
Query: 497  cctt 500
            ||||
Sbjct: 648  cctt 645
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                            
Query: 218      ccaggcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctccgt 277
                |||| |||||||||| |||||||||||| ||||||||||| || |||||||||||||| |
Sbjct: 11101199 ccagacgtgtcatgctgtcaaattccttaatggcatcagtgaacttggcaacatctcctt 11101140

                                      
Query: 278      cgtccattgatgcagcaagatc 299
                | ||||| | ||||||||||||
Sbjct: 11101139 cctccatagctgcagcaagatc 11101118



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                            
Query: 137      cttaggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagca 196
                ||||||||||||||||||| |||||||| | ||||||||| |||||||||||||| || |
Sbjct: 11101598 cttaggttagatcatcctcgtcatcctcctttttcttcagctcattctttgccctgagga 11101539

                                
Query: 197      gcagtgtcgttttcca 212
                | || || ||||||||
Sbjct: 11101538 ggagggttgttttcca 11101523



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 94/117 (80%)
 Strand = Plus / Minus

                                                                            
Query: 384      atcagctctacatagttggcagatgccagcattaaggaggatgcctctgacactatactt 443
                |||| |||| ||||| || || ||||| || || ||||| || ||||||||||| |||||
Sbjct: 11100776 atcacctctgcatagctgacaaatgcctgcgttgaggagaatacctctgacactgtactt 11100717

                                                                         
Query: 444      cagcagattgttgttaattgattgacgagcaatatcttcaaaaatctccgttgcctt 500
                 || ||||| ||||| |||  ||| ||||||||  ||||||| |||||  |||||||
Sbjct: 11100716 aagaagattattgttgatttgttggcgagcaattgcttcaaatatctcatttgcctt 11100660
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>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:B1446H11
          Length = 135488

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                         
Query: 218   ccaggcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctccgt 277
             |||| |||||||||| |||||||||||| ||||||||||| || |||||||||||||| |
Sbjct: 71805 ccagacgtgtcatgctgtcaaattccttaatggcatcagtgaacttggcaacatctcctt 71746

                                   
Query: 278   cgtccattgatgcagcaagatc 299
             | ||||| | ||||||||||||
Sbjct: 71745 cctccatagctgcagcaagatc 71724



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                         
Query: 137   cttaggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagca 196
             ||||||||||||||||||| |||||||| | ||||||||| |||||||||||||| || |
Sbjct: 72204 cttaggttagatcatcctcgtcatcctcctttttcttcagctcattctttgccctgagga 72145

                             
Query: 197   gcagtgtcgttttcca 212
             | || || ||||||||
Sbjct: 72144 ggagggttgttttcca 72129



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 94/117 (80%)
 Strand = Plus / Minus

                                                                         
Query: 384   atcagctctacatagttggcagatgccagcattaaggaggatgcctctgacactatactt 443
             |||| |||| ||||| || || ||||| || || ||||| || ||||||||||| |||||
Sbjct: 71382 atcacctctgcatagctgacaaatgcctgcgttgaggagaatacctctgacactgtactt 71323

                                                                      
Query: 444   cagcagattgttgttaattgattgacgagcaatatcttcaaaaatctccgttgcctt 500
              || ||||| ||||| |||  ||| ||||||||  ||||||| |||||  |||||||
Sbjct: 71322 aagaagattattgttgatttgttggcgagcaattgcttcaaatatctcatttgcctt 71266
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>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0560B10, complete sequence
          Length = 108295

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 73/82 (89%)
 Strand = Plus / Minus

                                                                         
Query: 218   ccaggcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctccgt 277
             |||| |||||||||| |||||||||||| ||||||||||| || |||||||||||||| |
Sbjct: 59715 ccagacgtgtcatgctgtcaaattccttaatggcatcagtgaacttggcaacatctcctt 59656

                                   
Query: 278   cgtccattgatgcagcaagatc 299
             | ||||| | ||||||||||||
Sbjct: 59655 cctccatagctgcagcaagatc 59634



 Score = 79.8 bits (40), Expect = 8e-12
 Identities = 67/76 (88%)
 Strand = Plus / Minus

                                                                         
Query: 137   cttaggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagca 196
             ||||||||||||||||||| |||||||| | ||||||||| |||||||||||||| || |
Sbjct: 60114 cttaggttagatcatcctcgtcatcctcctttttcttcagctcattctttgccctgagga 60055

                             
Query: 197   gcagtgtcgttttcca 212
             | || || ||||||||
Sbjct: 60054 ggagggttgttttcca 60039



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 94/117 (80%)
 Strand = Plus / Minus

                                                                         
Query: 384   atcagctctacatagttggcagatgccagcattaaggaggatgcctctgacactatactt 443
             |||| |||| ||||| || || ||||| || || ||||| || ||||||||||| |||||
Sbjct: 59292 atcacctctgcatagctgacaaatgcctgcgttgaggagaatacctctgacactgtactt 59233

                                                                      
Query: 444   cagcagattgttgttaattgattgacgagcaatatcttcaaaaatctccgttgcctt 500
              || ||||| ||||| |||  ||| ||||||||  ||||||| |||||  |||||||
Sbjct: 59232 aagaagattattgttgatttgttggcgagcaattgcttcaaatatctcatttgcctt 59176
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>gb|BT018828.1| Zea mays clone EL01N0551C05.d mRNA sequence
          Length = 1753

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 70/81 (86%)
 Strand = Plus / Minus

                                                                        
Query: 139  taggttagatcatcctcatcatcctcttgtttcttcagttcattctttgccctcagcagc 198
            |||||||||||||||||||| ||||| | ||||||||  || ||||||||| |||| || 
Sbjct: 1527 taggttagatcatcctcatcctcctcctttttcttcaactcgttctttgccttcagaagg 1468

                                 
Query: 199  agtgtcgttttccaaggatcc 219
            || || |||||||||||||||
Sbjct: 1467 agagttgttttccaaggatcc 1447



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 82/97 (84%)
 Strand = Plus / Minus

                                                                       
Query: 389 ctctacatagttggcagatgccagcattaaggaggatgcctctgacactatacttcagca 448
           ||||||| |||||||| ||||| |||||||| ||  ||||||||||||  ||||| || |
Sbjct: 717 ctctacaaagttggcaaatgcccgcattaagaagagtgcctctgacaccgtacttgagaa 658

                                                
Query: 449 gattgttgttaattgattgacgagcaatatcttcaaa 485
           | || ||||| ||||||| ||||||||| ||||||||
Sbjct: 657 ggttattgtttattgatttacgagcaatttcttcaaa 621



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 50/58 (86%)
 Strand = Plus / Minus

                                                                      
Query: 218  ccaggcgtgtcatgccgtcaaattccttgatggcatcagtaaatttggcaacatctcc 275
            ||||||||||||||| |||||| ||||| |  ||||||||||| ||| |||| |||||
Sbjct: 1285 ccaggcgtgtcatgctgtcaaactcctttactgcatcagtaaacttgccaacgtctcc 1228
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>gb|AY653733.1| Acanthamoeba polyphaga mimivirus, complete genome
          Length = 1181404

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 147    atcatcctcatcatcctcttgtttctt 173
              ||||||||||||||| |||||||||||
Sbjct: 677139 atcatcctcatcatcgtcttgtttctt 677113
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>gb|AY116074.1| Takifugu rubripes RHBG mRNA, complete cds
          Length = 1418

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 145 agatcatcctcatcatcctctt 166
           ||||||||||||||||||||||
Sbjct: 73  agatcatcctcatcatcctctt 94
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>gb|AY353247.1| Oryzias latipes RhBG-like protein mRNA, complete cds
          Length = 2128

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 145 agatcatcctcatcatcctctt 166
           ||||||||||||||||||||||
Sbjct: 177 agatcatcctcatcatcctctt 198
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>ref|NM_001032646.1| Takifugu rubripes RhBG protein (RhBG), mRNA
          Length = 1418

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 145 agatcatcctcatcatcctctt 166
           ||||||||||||||||||||||
Sbjct: 73  agatcatcctcatcatcctctt 94
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>gb|AY865614.1| Tetraodon nigroviridis Rh type B glycoprotein mRNA, complete cds
          Length = 1356

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 145 agatcatcctcatcatcctctt 166
           ||||||||||||||||||||||
Sbjct: 59  agatcatcctcatcatcctctt 80
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>dbj|AP006865.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT37H21, TM1032,
             complete sequence
          Length = 95067

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 79/98 (80%)
 Strand = Plus / Minus

                                                                         
Query: 392   tacatagttggcagatgccagcattaaggaggatgcctctgacactatacttcagcagat 451
             |||| |||||||| ||||| |||||||| |||   ||| | || | ||||||||||| ||
Sbjct: 86679 tacaaagttggcaaatgccggcattaagaaggtgtcctttaactccatacttcagcaaat 86620

                                                   
Query: 452   tgttgttaattgattgacgagcaatatcttcaaaaatc 489
             ||||||| |  || || ||||| ||||||||| |||||
Sbjct: 86619 tgttgttgagagactggcgagctatatcttcataaatc 86582
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>emb|AL358072.21| Human DNA sequence from clone RP11-188D8 on chromosome 1 Contains the
             5' end of the MAN1A2 gene for mannosidase alpha class 1A
             member 2 and two CpG islands, complete sequence
          Length = 129725

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 168   tttcttcagttcattctttgc 188
             |||||||||||||||||||||
Sbjct: 98225 tttcttcagttcattctttgc 98245
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 98      aatcacaccatgttgaagcat 118
               |||||||||||||||||||||
Sbjct: 3129010 aatcacaccatgttgaagcat 3128990
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>gb|AC122309.5| Mus musculus BAC clone RP23-293G2 from chromosome 14, complete sequence
          Length = 208443

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     attatgcccattatatgtac 64
              ||||||||||||||||||||
Sbjct: 165573 attatgcccattatatgtac 165554
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>ref|XM_641234.1| Dictyostelium discoideum hypothetical protein (DDB0190598), partial
           mRNA
          Length = 822

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 atcatcctcatcatcctctt 166
           ||||||||||||||||||||
Sbjct: 360 atcatcctcatcatcctctt 379
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>ref|XM_638842.1| Dictyostelium discoideum hypothetical protein (DDB0167879), partial
           mRNA
          Length = 1947

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 atcatcctcatcatcctctt 166
           ||||||||||||||||||||
Sbjct: 249 atcatcctcatcatcctctt 230
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>ref|XM_629931.1| Dictyostelium discoideum hypothetical protein (DDB0184069), partial
            mRNA
          Length = 3693

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 147  atcatcctcatcatcctctt 166
            ||||||||||||||||||||
Sbjct: 1038 atcatcctcatcatcctctt 1019
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>ref|XM_516687.1| PREDICTED: Pan troglodytes similar to KIAA0036 (LOC460626), mRNA
          Length = 4317

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 157  tcatcctcttgtttcttcagttca 180
            |||||| |||||||||||||||||
Sbjct: 1512 tcatccacttgtttcttcagttca 1489
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>ref|XM_615634.2| PREDICTED: Bos taurus similar to forkhead box O3A (LOC535530), mRNA
          Length = 3564

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 81   aggcatacaaatgtataaat 100
            ||||||||||||||||||||
Sbjct: 3498 aggcatacaaatgtataaat 3517
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 159      atcctcttgtttcttcagtt 178
                ||||||||||||||||||||
Sbjct: 34986995 atcctcttgtttcttcagtt 34986976
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>ref|XM_721492.1| Plasmodium yoelii yoelii str. 17XNL mature-parasite-infected
            erythrocyte surface antigen (PY06014) partial mRNA
          Length = 2286

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 147  atcatcctcatcatcctctt 166
            ||||||||||||||||||||
Sbjct: 1239 atcatcctcatcatcctctt 1220
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>ref|XM_724561.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY00022)
           partial mRNA
          Length = 1854

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 147 atcatcctcatcatcctctt 166
           ||||||||||||||||||||
Sbjct: 996 atcatcctcatcatcctctt 977
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>ref|XM_846130.1| PREDICTED: Canis familiaris similar to small androgen
            receptor-interacting protein, transcript variant 1
            (LOC609552), mRNA
          Length = 1332

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 146  gatcatcctcatcatcctct 165
            ||||||||||||||||||||
Sbjct: 1123 gatcatcctcatcatcctct 1104
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>ref|XM_858213.1| PREDICTED: Canis familiaris similar to small androgen
           receptor-interacting protein, transcript variant 6
           (LOC609552), mRNA
          Length = 1162

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 146 gatcatcctcatcatcctct 165
           ||||||||||||||||||||
Sbjct: 953 gatcatcctcatcatcctct 934
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>ref|XM_858189.1| PREDICTED: Canis familiaris similar to small androgen
           receptor-interacting protein, transcript variant 5
           (LOC609552), mRNA
          Length = 1041

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 146 gatcatcctcatcatcctct 165
           ||||||||||||||||||||
Sbjct: 832 gatcatcctcatcatcctct 813
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>ref|XM_858167.1| PREDICTED: Canis familiaris similar to small androgen
            receptor-interacting protein, transcript variant 4
            (LOC609552), mRNA
          Length = 1327

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 146  gatcatcctcatcatcctct 165
            ||||||||||||||||||||
Sbjct: 1118 gatcatcctcatcatcctct 1099
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>ref|XM_858145.1| PREDICTED: Canis familiaris similar to small androgen
            receptor-interacting protein, transcript variant 3
            (LOC609552), mRNA
          Length = 1307

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 146  gatcatcctcatcatcctct 165
            ||||||||||||||||||||
Sbjct: 1098 gatcatcctcatcatcctct 1079
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>ref|XM_858127.1| PREDICTED: Canis familiaris similar to small androgen
           receptor-interacting protein, transcript variant 2
           (LOC609552), mRNA
          Length = 910

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 146 gatcatcctcatcatcctct 165
           ||||||||||||||||||||
Sbjct: 701 gatcatcctcatcatcctct 682
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>ref|XM_782002.1| PREDICTED: Strongylocentrotus purpuratus similar to MEGF10 protein
            (LOC582027), mRNA
          Length = 2685

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 147  atcatcctcatcatcctctt 166
            ||||||||||||||||||||
Sbjct: 1603 atcatcctcatcatcctctt 1622
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>emb|AL929588.11| Mouse DNA sequence from clone RP23-87L24 on chromosome 2, complete
             sequence
          Length = 134787

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   atcatcctcatcatcctctt 166
             ||||||||||||||||||||
Sbjct: 29117 atcatcctcatcatcctctt 29136
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 159      atcctcttgtttcttcagtt 178
                ||||||||||||||||||||
Sbjct: 35077067 atcctcttgtttcttcagtt 35077048
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>gb|AC154545.2| Mus musculus BAC clone RP23-431G16 from chromosome 16, complete
             sequence
          Length = 202933

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    tcttcattatgcccattata 59
             ||||||||||||||||||||
Sbjct: 34186 tcttcattatgcccattata 34167
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>gb|AC116986.2| Dictyostelium discoideum chromosome 2 map 2234041-2567370 strain AX4,
              complete sequence
          Length = 333321

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 147    atcatcctcatcatcctctt 166
              ||||||||||||||||||||
Sbjct: 182402 atcatcctcatcatcctctt 182421
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>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete
             sequence
          Length = 171376

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   atcctcttgtttcttcagtt 178
             ||||||||||||||||||||
Sbjct: 28485 atcctcttgtttcttcagtt 28504
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>gb|AC084854.11| Homo sapiens chromosome 15, clone CTD-3006F8, complete sequence
          Length = 145201

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 168   tttcttcagttcattctttg 187
             ||||||||||||||||||||
Sbjct: 91937 tttcttcagttcattctttg 91918
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>emb|Y16564.1|PBY16564 Phyllomedusa bicolor mRNA for preprodermaseptine B3
          Length = 352

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 153 ctcatcatcctcttgtttct 172
           ||||||||||||||||||||
Sbjct: 168 ctcatcatcctcttgtttct 149
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>emb|BX927343.16| Zebrafish DNA sequence from clone CH211-57L21 in linkage group 16,
             complete sequence
          Length = 166820

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   tgaagcatgaaagaattttt 130
             ||||||||||||||||||||
Sbjct: 87252 tgaagcatgaaagaattttt 87271
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>gb|AC107884.15| Homo sapiens chromosome 11, clone CTD-2516F10, complete sequence
          Length = 177416

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      ttcaaaatgaagttctatacaacc 29
              |||||||||||||||||| |||||
Sbjct: 133445 ttcaaaatgaagttctattcaacc 133422


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,047,415
Number of Sequences: 3902068
Number of extensions: 5047415
Number of successful extensions: 113473
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 113273
Number of HSP's gapped (non-prelim): 199
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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