>MPPA_SOLTU (P29677) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (Ubiquinol-cytochrome-c reductase subunit II) (EC
           1.10.2.2)
          Length = 504

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 27/48 (56%), Positives = 40/48 (83%)
 Frame = -2

Query: 491 LKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGKFSSK 348
           LKA+DA++  D+++V  K+ISSPLTMAS+G+VLS+P+Y+ V  +F SK
Sbjct: 457 LKAIDAVSAKDIASVVQKLISSPLTMASYGDVLSLPSYDAVSSRFRSK 504

>MPPA1_ARATH (Q9ZU25) Probable mitochondrial-processing peptidase alpha subunit|
           1, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 1)
          Length = 503

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 24/45 (53%), Positives = 35/45 (77%)
 Frame = -2

Query: 491 LKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGKF 357
           LK+VD +TL D++   +K+IS PLTM S G+VL+VP+Y+T+  KF
Sbjct: 458 LKSVDQLTLKDIADFTSKVISKPLTMGSFGDVLAVPSYDTISSKF 502

>MPPA2_ARATH (O04308) Probable mitochondrial-processing peptidase alpha subunit|
           2, mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP 2)
          Length = 499

 Score = 51.6 bits (122), Expect = 1e-06
 Identities = 22/45 (48%), Positives = 35/45 (77%)
 Frame = -2

Query: 491 LKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVPAYETVRGKF 357
           LK VD +TL D++   +K+I+ PLTMA+ G+VL+VP+Y++V  +F
Sbjct: 454 LKTVDQLTLKDIADFTSKVITKPLTMATFGDVLNVPSYDSVSKRF 498

>ZN605_HUMAN (Q86T29) Zinc finger protein 605|
          Length = 641

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = -2

Query: 170 CCSLEICYCKFSEIM-HGWPSFGGSPEGCTKCSSTFFG*SR 51
           C   E  + K SE++ H     G  P GC +C  TFFG S+
Sbjct: 395 CSDCEEAFFKKSELIRHQKIHLGEKPYGCIQCGKTFFGKSQ 435

>MPPA_PONPY (Q5R513) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
          Length = 525

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -2

Query: 461 DVSTVAAKIISSPLTMASHGNVLSVPAYETVRGKFSSK*G 342
           DV  VA+K++     +A+ G++  +P YE ++   SSK G
Sbjct: 476 DVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDG 515

>MPPA_HUMAN (Q10713) Mitochondrial-processing peptidase alpha subunit,|
           mitochondrial precursor (EC 3.4.24.64) (Alpha-MPP)
           (P-55)
          Length = 525

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 14/40 (35%), Positives = 24/40 (60%)
 Frame = -2

Query: 461 DVSTVAAKIISSPLTMASHGNVLSVPAYETVRGKFSSK*G 342
           DV  VA+K++     +A+ G++  +P YE ++   SSK G
Sbjct: 476 DVKRVASKMLRGKPAVAALGDLTDLPTYEHIQTALSSKDG 515

>UQCR2_BOVIN (P23004) Ubiquinol-cytochrome-c reductase complex core protein 2,|
           mitochondrial precursor (EC 1.10.2.2) (Complex III
           subunit II)
          Length = 453

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -2

Query: 491 LKAVDAITLADVSTVAAKIISSPLTMASHGNVLSVP 384
           L+ +DA+  ADV   A K +S   +MA+ GN+   P
Sbjct: 413 LQQIDAVADADVINAAKKFVSGRKSMAASGNLGHTP 448

>MMK1_MEDSA (Q07176) Mitogen-activated protein kinase homolog MMK1 (EC|
           2.7.11.24) (MAP kinase MSK7) (MAP kinase ERK1)
          Length = 387

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -3

Query: 403 ETFSAYQPMRQCVASSARNEEASEQVNCSYFFFKIICG-HIFHKKNKMHTILVINSSTLG 227
           + + AY+ M   +    R+ +A  + +C YF ++I+ G    H  N +H  L  ++  L 
Sbjct: 131 DVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 190

Query: 226 QLWDL 212
              DL
Sbjct: 191 ANCDL 195

>MAPK_PEA (Q06060) Mitogen-activated protein kinase homolog D5 (EC 2.7.11.24)|
          Length = 394

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -3

Query: 403 ETFSAYQPMRQCVASSARNEEASEQVNCSYFFFKIICG-HIFHKKNKMHTILVINSSTLG 227
           + + AY+ M   +    R+ +A  + +C YF ++I+ G    H  N +H  L  ++  L 
Sbjct: 138 DVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 197

Query: 226 QLWDL 212
              DL
Sbjct: 198 ANCDL 202

>AGUA_VIBPA (Q87NU5) Putative agmatine deiminase (EC 3.5.3.12) (Agmatine|
           iminohydrolase)
          Length = 360

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 12/28 (42%), Positives = 19/28 (67%)
 Frame = -3

Query: 364 ASSARNEEASEQVNCSYFFFKIICGHIF 281
           ASS  + +A E+++ SY  F I+ GH+F
Sbjct: 284 ASSGMSRQAGERLSASYANFLIVNGHVF 311

>MPK6_ARATH (Q39026) Mitogen-activated protein kinase homolog 6 (EC 2.7.11.24)|
           (MAP kinase 6) (AtMPK6)
          Length = 395

 Score = 28.9 bits (63), Expect = 7.8
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -3

Query: 403 ETFSAYQPMRQCVASSARNEEASEQVNCSYFFFKIICG-HIFHKKNKMHTILVINSSTLG 227
           + + AY+ M   +    R+ +A  + +C YF ++I+ G    H  N +H  L  ++  L 
Sbjct: 139 DVYIAYELMDTDLHQIIRSNQALSEEHCQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 198

Query: 226 QLWDL 212
              DL
Sbjct: 199 ANCDL 203


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,607,386
Number of Sequences: 219361
Number of extensions: 1393917
Number of successful extensions: 3970
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3968
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)