ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart31h06 |
|---|---|
| Clone Library Name | barley_pub |
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 67.8 bits (164), Expect = 1e-11 Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 4/81 (4%) Frame = -3 Query: 488 IPPREEGGKXXXXXXXXDCSSGPT----QEAELLMDVAMMVMTNGRQRDETDWSEIFIKA 321 IPPRE GGK +GP+ +E + + DV +M + NG +RDE +WS+IF +A Sbjct: 287 IPPREAGGKVIIINMVV--GAGPSDMKHKEMQAIFDVYIMFI-NGMERDEQEWSKIFSEA 343 Query: 320 GFSDYKVVKKLGARGVFEVYP 258 G+SDY+++ LG R + EVYP Sbjct: 344 GYSDYRIIPVLGVRSIIEVYP 364
>7OMT9_MEDSA (O22309) Isoflavone-7-O-methytransferase 9 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 9) (7 IOMT-9) Length = 352 Score = 50.1 bits (118), Expect = 3e-06 Identities = 22/52 (42%), Positives = 35/52 (67%) Frame = -3 Query: 413 EAELLMDVAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 258 + +LLMDV M + NG++R+E +W ++FI+AGF YK+ G + E+YP Sbjct: 302 QIKLLMDVNMACL-NGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 50.1 bits (118), Expect = 3e-06 Identities = 22/52 (42%), Positives = 35/52 (67%) Frame = -3 Query: 413 EAELLMDVAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 258 + +LLMDV M + NG++R+E +W ++FI+AGF YK+ G + E+YP Sbjct: 302 QIKLLMDVNMACL-NGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 50.1 bits (118), Expect = 3e-06 Identities = 22/52 (42%), Positives = 35/52 (67%) Frame = -3 Query: 413 EAELLMDVAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 258 + +LLMDV M + NG++R+E +W ++FI+AGF YK+ G + E+YP Sbjct: 302 QIKLLMDVNMACL-NGKERNEEEWKKLFIEAGFQHYKISPLTGFLSLIEIYP 352
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 46.2 bits (108), Expect = 5e-05 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = -3 Query: 413 EAELLMDVAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 258 E +L D+AMM N ++R ++W ++ AGF YK+ G R + E YP Sbjct: 306 EDQLHFDMAMMCYFNAKERTMSEWEKLIYDAGFKSYKLTPAFGVRSLIEAYP 357
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 45.4 bits (106), Expect = 8e-05 Identities = 19/52 (36%), Positives = 29/52 (55%) Frame = -3 Query: 413 EAELLMDVAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 258 E +L D+AMM N ++R +W ++ AGF+ YK+ G R + E YP Sbjct: 305 EDQLHFDMAMMSYFNAKERTMNEWEKLISAAGFTSYKLTPAFGVRSLIEAYP 356
>6OMT_COPJA (Q9LEL6) (RS)-norcoclaurine 6-O-methyltransferase (EC 2.1.1.128)| (S-adenosyl-L-methionine:norcoclaurine 6-O-methyltransferase) (6-OMT) Length = 347 Score = 44.3 bits (103), Expect = 2e-04 Identities = 18/58 (31%), Positives = 32/58 (55%) Frame = -3 Query: 431 SSGPTQEAELLMDVAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 258 S P + L +D+ MM+ T G++R E +W ++ AG+ +K+ + + V E YP Sbjct: 289 SEHPYTKMRLTLDLDMMLNTGGKERTEEEWKKLIHDAGYKGHKITQITAVQSVIEAYP 346
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 40.0 bits (92), Expect = 0.003 Identities = 18/49 (36%), Positives = 29/49 (59%) Frame = -3 Query: 404 LLMDVAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARGVFEVYP 258 L++D+ M+V T G++R + W +I AGFS K+ + V EV+P Sbjct: 302 LILDIDMLVNTGGKERTKEVWEKIVKSAGFSGCKIRHIAAIQSVIEVFP 350
>PURA_BLOFL (Q7VQP1) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 438 Score = 31.6 bits (70), Expect = 1.2 Identities = 18/64 (28%), Positives = 35/64 (54%) Frame = +3 Query: 84 YPPDISGKVRQFP*STSTEANHKL*YSLRS*LFDAASGQYCIEFASINSDPYFWSCLSRV 263 +P ++SG + ++ + E R+ FDA S ++ I+ +SINS +CL+++ Sbjct: 285 FPTELSGDIAEWLCTRGQEFGSTTGRRRRTGWFDAVSVRHAIKISSINS-----ACLTKI 339 Query: 264 DLKD 275 D+ D Sbjct: 340 DILD 343
>PSD10_RAT (Q9Z2X3) 26S proteasome non-ATPase regulatory subunit 10 (26S| proteasome regulatory subunit p28) (Gankyrin) Length = 231 Score = 30.4 bits (67), Expect = 2.7 Identities = 16/53 (30%), Positives = 28/53 (52%) Frame = -3 Query: 434 CSSGPTQEAELLMDVAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARG 276 CS+G T+ E L+ + + V ++D+ WS + I A ++VK L +G Sbjct: 48 CSAGHTEIVEFLLQLGVPV----NEKDDAGWSPLHIAASAGRDEIVKALLIKG 96
>PSD10_HUMAN (O75832) 26S proteasome non-ATPase regulatory subunit 10 (26S| proteasome regulatory subunit p28) (Gankyrin) Length = 226 Score = 30.0 bits (66), Expect = 3.5 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = -3 Query: 434 CSSGPTQEAELLMDVAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARG 276 CS+G T+ E L+ + + V +D+ WS + I A ++VK L +G Sbjct: 48 CSAGHTEIVEFLLQLGVPV----NDKDDAGWSPLHIAASAGRDEIVKALLGKG 96
>PSD10_MOUSE (Q9Z2X2) 26S proteasome non-ATPase regulatory subunit 10 (26S| proteasome regulatory subunit p28) (Gankyrin) Length = 231 Score = 30.0 bits (66), Expect = 3.5 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = -3 Query: 434 CSSGPTQEAELLMDVAMMVMTNGRQRDETDWSEIFIKAGFSDYKVVKKLGARG 276 CS+G T+ E L+ + + V +D+ WS + I A ++VK L +G Sbjct: 48 CSAGHTEIVEFLLQLGVPV----NDKDDAGWSPLHIAASAGRDEIVKALLVKG 96
>BACR3_HALSD (P96787) Archaerhodopsin-3 precursor (AR 3)| Length = 258 Score = 29.6 bits (65), Expect = 4.5 Identities = 17/45 (37%), Positives = 26/45 (57%) Frame = +1 Query: 322 ALMNISLQSVSSRCRPLVITIMATSMRSSASCVGPEEQSTTMSMT 456 A+ S S+ C +V+ +ATS+RS+A GPE ST ++T Sbjct: 141 AIARYSWWLFSTICMIVVLYFLATSLRSAAKERGPEVASTFNTLT 185
>CTX_PSEAE (P14608) Cytotoxin precursor (Leucocidin)| Length = 286 Score = 29.6 bits (65), Expect = 4.5 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = -1 Query: 163 EYYNLWFASVDVLYGNCLTFPDMSGG*YCTR*DGVLCIIWGVMHSWLLSNL 11 +Y+ LWF V+ ++ C+ ++ Y + +GVL G HS + NL Sbjct: 199 DYHYLWFIPVEQVFWECVQHNIVNTSGYVVQGNGVLAQATGTFHSSVGLNL 249
>CHOMT_MEDSA (P93324) Isoliquiritigenin 2'-O-methyltransferase (EC 2.1.1.-)| (Chalcone O-methyltransferase) (ChOMT) Length = 372 Score = 29.6 bits (65), Expect = 4.5 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 3/56 (5%) Frame = -3 Query: 419 TQEAELL--MDVAMMVMTNGRQRDETDWSEIFIKAGFSDYKVV-KKLGARGVFEVY 261 ++E++L+ +D M + GR+R E + ++ +GFS ++V + + GV E Y Sbjct: 316 SEESKLVSTLDNLMFITVGGRERTEKQYEKLSKLSGFSKFQVACRAFNSLGVMEFY 371
>TCMN_STRGA (P16559) Multifunctional cyclase-dehydratase-3-O-methyl transferase| tcmN Length = 494 Score = 29.3 bits (64), Expect = 5.9 Identities = 10/29 (34%), Positives = 20/29 (68%) Frame = -3 Query: 401 LMDVAMMVMTNGRQRDETDWSEIFIKAGF 315 L+D+ M+V+ GR+R +W ++ ++A F Sbjct: 448 LLDIDMLVLFGGRERVLAEWRQLLLEADF 476
>QUEA_CLOPE (Q8XJ15) S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC| 5.-.-.-) (Queuosine biosynthesis protein queA) Length = 341 Score = 29.3 bits (64), Expect = 5.9 Identities = 12/28 (42%), Positives = 20/28 (71%) Frame = -3 Query: 371 NGRQRDETDWSEIFIKAGFSDYKVVKKL 288 NGR R+++ W++IFI G+ +K+V L Sbjct: 267 NGRVREQSGWTDIFIYPGYK-FKIVDNL 293 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,572,181 Number of Sequences: 219361 Number of extensions: 1408623 Number of successful extensions: 3145 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 3105 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3144 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3420806017 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
