>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 397     gtccgcggccgcgccgtcgtcc 418
               ||||||||||||||||||||||
Sbjct: 1696642 gtccgcggccgcgccgtcgtcc 1696663

>gb|BC095614.1| Danio rerio NADH dehydrogenase (ubiquinone) Fe-S protein 5, mRNA
           (cDNA clone MGC:111955 IMAGE:7248997), complete cds
          Length = 541

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 367 tggacaagtggctgctggctca 388
           ||||||||||||||||||||||
Sbjct: 110 tggacaagtggctgctggctca 131

>ref|NM_001020633.1| Danio rerio NADH dehydrogenase (ubiquinone) Fe-S protein 5
           (ndufs5), mRNA
          Length = 541

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 367 tggacaagtggctgctggctca 388
           ||||||||||||||||||||||
Sbjct: 110 tggacaagtggctgctggctca 131

>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 397     gtccgcggccgcgccgtcgtcc 418
               ||||||||||||||||||||||
Sbjct: 3031532 gtccgcggccgcgccgtcgtcc 3031553

>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 397     gtccgcggccgcgccgtcgtcc 418
               ||||||||||||||||||||||
Sbjct: 2180357 gtccgcggccgcgccgtcgtcc 2180378

>emb|CR753876.17| Zebrafish DNA sequence from clone DKEYP-116A7 in linkage group 19,
             complete sequence
          Length = 118451

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 367   tggacaagtggctgctggctca 388
             ||||||||||||||||||||||
Sbjct: 57921 tggacaagtggctgctggctca 57900

>gb|AC125446.12| Mus musculus chromosome 14, clone RP24-501J23, complete sequence
          Length = 159722

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 253    ggctcatcaactgtgatttga 273
              |||||||||||||||||||||
Sbjct: 140859 ggctcatcaactgtgatttga 140879

>ref|XM_382340.1| Gibberella zeae PH-1 chromosome 1 predicted protein (FG02164.1)
           partial mRNA
          Length = 996

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 47  cagactgtagtacctccactt 67
           |||||||||||||||||||||
Sbjct: 528 cagactgtagtacctccactt 508

>ref|XM_534485.2| PREDICTED: Canis familiaris similar to thrombospondin type I
            domain-containing 1 isoform 1 (LOC477293), mRNA
          Length = 2824

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 396  tgtccgcggccgcgccgtcg 415
            ||||||||||||||||||||
Sbjct: 1777 tgtccgcggccgcgccgtcg 1758

>emb|AL355136.19| Human DNA sequence from clone RP11-435P18 on chromosome 13, complete
             sequence
          Length = 200059

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 167   attccacatagtagttggaagtcc 190
             |||| |||||||||||||||||||
Sbjct: 39906 attcaacatagtagttggaagtcc 39883

>emb|BX063779.1|CNS09LDJ Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC45DC05 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 930

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 440 agcagcggcacgaacttgagcatg 463
           |||||||| |||||||||||||||
Sbjct: 646 agcagcggaacgaacttgagcatg 669

>emb|BX538353.1| Cryptosporidium parvum chromosome 6, complete sequence; segment 4/4
          Length = 277703

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 208    cttgattatttgatttgttaattt 231
              |||| |||||||||||||||||||
Sbjct: 124434 cttgcttatttgatttgttaattt 124411

>emb|CR376751.15| Zebrafish DNA sequence from clone CH211-220M6 in linkage group 8,
              complete sequence
          Length = 229078

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    ttgttaatttagttcatctc 241
              ||||||||||||||||||||
Sbjct: 164216 ttgttaatttagttcatctc 164235

>emb|CR847797.8| Zebrafish DNA sequence from clone DKEY-281F2 in linkage group 8, complete
              sequence
          Length = 219913

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    ttgttaatttagttcatctc 241
              ||||||||||||||||||||
Sbjct: 168900 ttgttaatttagttcatctc 168919

>emb|BX927204.6| Zebrafish DNA sequence from clone CH211-103B12 in linkage group 23,
              complete sequence
          Length = 165759

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    ttatttgatttgttaattta 232
              ||||||||||||||||||||
Sbjct: 144630 ttatttgatttgttaattta 144649

>emb|BX004825.12| Zebrafish DNA sequence from clone DKEYP-1E8 Contains the gene for a
             novel protein similar to vertebrate cyclin G associated
             kinase (GAK), the gene for a novel protein similar to
             vertebrate lymphocyte adaptor protein (LNK), a novel gene
             and six CpG islands, complete sequence
          Length = 162381

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    ctctggtttatcagagatta 31
             ||||||||||||||||||||
Sbjct: 45600 ctctggtttatcagagatta 45581

>emb|BX548162.12| Zebrafish DNA sequence from clone DKEYP-90D11 in linkage group 11,
             complete sequence
          Length = 180422

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 209   ttgattatttgatttgttaattta 232
             ||||||| ||||||||||||||||
Sbjct: 42560 ttgattagttgatttgttaattta 42583

>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 406     cgcgccgtcgtccatctcct 425
               ||||||||||||||||||||
Sbjct: 1294753 cgcgccgtcgtccatctcct 1294772

>gb|AC162161.9| Medicago truncatula clone mth2-2g22, complete sequence
          Length = 109841

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 212   attatttgatttgttaatttagtt 235
             ||||||| ||||||||||||||||
Sbjct: 31585 attatttaatttgttaatttagtt 31608

>gb|AE012392.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 300
            of 460 of the complete genome
          Length = 10825

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 406  cgcgccgtcgtccatctcct 425
            ||||||||||||||||||||
Sbjct: 5403 cgcgccgtcgtccatctcct 5384

>gb|AY485922.1| Mastus gittenbergeri clone DIA2 16S ribosomal RNA gene, partial
           sequence; mitochondrial
          Length = 415

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 19  ttatcagagattattgaact 38
           ||||||||||||||||||||
Sbjct: 223 ttatcagagattattgaact 242

>gb|AY485921.1| Mastus gittenbergeri clone DIA1 16S ribosomal RNA gene, partial
           sequence; mitochondrial
          Length = 416

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 19  ttatcagagattattgaact 38
           ||||||||||||||||||||
Sbjct: 224 ttatcagagattattgaact 243

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 406     cgcgccgtcgtccatctcct 425
               ||||||||||||||||||||
Sbjct: 1603085 cgcgccgtcgtccatctcct 1603104

>gb|AY954962.1| Bacteriophage 71, complete genome
          Length = 43114

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  atttgatttgttaatttagt 234
            ||||||||||||||||||||
Sbjct: 4804 atttgatttgttaatttagt 4785

>gb|AY954961.1| Bacteriophage ROSA, complete genome
          Length = 43155

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  atttgatttgttaatttagt 234
            ||||||||||||||||||||
Sbjct: 4878 atttgatttgttaatttagt 4859

>emb|AL929292.7| Zebrafish DNA sequence from clone DKEY-11L24 in linkage group 14,
              complete sequence
          Length = 218922

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 12     ctctggtttatcagagatta 31
              ||||||||||||||||||||
Sbjct: 158571 ctctggtttatcagagatta 158552

>gb|AC006143.1|AC006143 Homo sapiens PAC clone RP1-74M20 from X, complete sequence
          Length = 191544

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 167    attccacatagtagttggaagtcc 190
              |||| |||||||||||||||||||
Sbjct: 126424 attcaacatagtagttggaagtcc 126401

>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 406     cgcgccgtcgtccatctcct 425
               ||||||||||||||||||||
Sbjct: 1318531 cgcgccgtcgtccatctcct 1318550

>emb|CR382296.26| Zebrafish DNA sequence from clone DKEY-121H17 in linkage group 21,
             complete sequence
          Length = 137360

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   ttatttgatttgttaattta 232
             ||||||||||||||||||||
Sbjct: 69396 ttatttgatttgttaattta 69415

>emb|AL845287.10| Zebrafish DNA sequence from clone DKEY-78K11, complete sequence
          Length = 174301

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 213   ttatttgatttgttaattta 232
             ||||||||||||||||||||
Sbjct: 19879 ttatttgatttgttaattta 19898


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,443,488
Number of Sequences: 3902068
Number of extensions: 3443488
Number of successful extensions: 61418
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 61125
Number of HSP's gapped (non-prelim): 293
length of query: 476
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 454
effective length of database: 17,147,199,772
effective search space: 7784828696488
effective search space used: 7784828696488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)