>ASX_DROME (Q9V727) Polycomb protein Asx (Additional sex combs)|
          Length = 1669

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 4/53 (7%)
 Frame = +2

Query: 50   SGRMECPYKTAGLPPGKMGVGTKKEVAVTIPR----PMSAYLQRGNEPTSSTR 196
            SG +      AGLPP  MGVG      V  PR    P   Y+QR   PT+  R
Sbjct: 1341 SGAVGAGALPAGLPPNVMGVGRPGVYKVIGPRMSGFPRKKYVQRKPSPTTLIR 1393

>CG031_HUMAN (Q8N865) Protein C7orf31|
          Length = 590

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 329 ATVAARPRSCKGLSPEALCNLRSWLETDR 243
           A V  RPRSC   +P  LCN  +++ + +
Sbjct: 347 AIVQQRPRSCPDCTPRVLCNFHTFVPSSK 375

>YMS5_CAEEL (P34501) Hypothetical protein K03H1.5 precursor|
          Length = 1385

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 60  WNAPTKLPGYRLEKWE*ELKRRWQL 134
           W+ PT  P Y L +WE    R W +
Sbjct: 662 WSKPTPFPWYHLHEWERYYGRNWPI 686

>Y6G2_ENCCU (Q8SV63) Hypothetical protein ECU06_1620|
          Length = 579

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +3

Query: 15  QGRKERENTHETVGEWNAPTKLPGYRLEKWE*ELKRRWQLRFLD 146
           +G ++R   H+ V  W    K P    E+W+ E + RW+ R L+
Sbjct: 379 RGGRKRYKIHKRVSRWR---KSPEKIKEEWDRESEERWRGRSLE 419

>GRIK4_RAT (Q01812) Glutamate receptor, ionotropic kainate 4 precursor|
           (Glutamate receptor KA-1) (KA1)
          Length = 956

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -3

Query: 350 GSPPQPPATVAARPRSCKGLSPEALC 273
           G PPQPP     RPR    LS   LC
Sbjct: 868 GLPPQPPVLEERRPRGTATLSNGKLC 893

>LBXCO_HUMAN (P84550) Ladybird homeobox corepressor 1|
          Length = 965

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
 Frame = -2

Query: 357 GARVAPSAPRH---RCGEAEELQGPVAGGPVQPEELAG 253
           GA +AP  P H   RCGE +E  GP    P  P+   G
Sbjct: 313 GAEMAPGPPPHKSLRCGE-DEAAGPPGPPPPHPQRGLG 349

>SCNAA_MOUSE (Q61180) Amiloride-sensitive sodium channel alpha-subunit|
           (Epithelial Na+ channel alpha subunit) (Alpha ENaC)
           (Nonvoltage-gated sodium channel 1 alpha subunit)
           (SCNEA) (Alpha NaCH)
          Length = 699

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +2

Query: 65  CPYKTAGLPPGKMGVGTKKEVAVTIPRPMSAYLQRGNEPTSSTRQGAGA 211
           CP+ T+  PP     GT   +A+T P P  A L     P  S   G+ A
Sbjct: 645 CPHPTSP-PPSLPQQGTTPPLALTAPPPAYATLGPSASPLDSAVPGSSA 692

>KLH17_RAT (Q8K430) Kelch-like protein 17 (Actinfilin)|
          Length = 640

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = -3

Query: 362 GSELGSPPQPPATVA--ARPRSCKGLSP 285
           G E   PPQPPA  A  ARPR  +  +P
Sbjct: 23  GPEAPPPPQPPAPEAERARPRQARPAAP 50

>KLH17_MOUSE (Q6TDP3) Kelch-like protein 17 (Actinfilin)|
          Length = 640

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 2/28 (7%)
 Frame = -3

Query: 362 GSELGSPPQPPATVA--ARPRSCKGLSP 285
           G E   PPQPPA  A  ARPR  +  +P
Sbjct: 23  GPEAPPPPQPPAPEAERARPRQARPAAP 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.123    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,684,851
Number of Sequences: 219361
Number of extensions: 946411
Number of successful extensions: 3096
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3095
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 1391514312
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)