ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart31g12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome... 109 7e-21
2gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome... 109 7e-21
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 109 7e-21
4dbj|AK067074.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 7e-21
5gb|AY112294.1| Zea mays CL24073_1 mRNA sequence 76 9e-11
6gb|BT016547.1| Zea mays clone Contig380 mRNA sequence 72 1e-09
7gb|AC158619.12| Mus musculus 10 BAC RP23-291O3 (Roswell Park Can... 46 0.083
8gb|AC153510.10| Mus musculus 10 BAC RP23-151C4 (Roswell Park Can... 46 0.083
9gb|AC114689.4| Homo sapiens chromosome 18, clone RP11-638L3, com... 46 0.083
10gb|AC100844.2| Homo sapiens chromosome 18, clone RP11-659F24, co... 46 0.083
11gb|AC021561.8| Homo sapiens chromosome 18, clone RP11-766D3, com... 46 0.083
12gb|AC140426.3| Mus musculus BAC clone RP24-98A17 from chromosome... 44 0.33
13gb|AC062015.7| Homo sapiens BAC clone CTD-2031E17 from 2, comple... 44 0.33
14gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 42 1.3
15gb|AC119875.7| Mus musculus chromosome 1, clone RP24-291C20, com... 42 1.3
16gb|AC124602.5| Mus musculus BAC clone RP23-37L7 from chromosome ... 42 1.3
17gb|AC147677.4| Canis Familiaris, clone XX-25A1, complete sequence 42 1.3
18gb|AC023286.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 42 1.3
19gb|AC122182.4| Mus musculus BAC clone RP23-12G9 from 1, complete... 42 1.3
20gb|AC126785.11| Medicago truncatula clone mth2-9i24, complete se... 42 1.3
21gb|AC025669.19| Mus musculus chromosome 14, clone RP23-5O16, com... 42 1.3
22gb|AC162178.2| Mus musculus BAC clone RP23-410H21 from chromosom... 42 1.3
23gb|AY029319.1| Zea mays seven transmembrane protein Mlo8 mRNA, c... 42 1.3
24gb|AC007556.3| Homo sapiens BAC clone RP11-18C9 from 2, complete... 42 1.3
25emb|BX548017.3| Mouse DNA sequence from clone RP23-335I21 on chr... 42 1.3
26gb|AC149222.4| Mus musculus BAC clone RP23-325D10 from 7, comple... 42 1.3
27gb|AY104078.1| Zea mays PCO070411 mRNA sequence 42 1.3
28emb|AL929452.9| Mouse DNA sequence from clone RP23-345L15 on chr... 42 1.3
29gb|AC139294.4| Mus musculus BAC clone RP24-239E14 from 14, compl... 42 1.3
30gb|AC110244.10| Mus musculus chromosome 5, clone RP23-247E10, co... 40 5.1
31gb|AC104414.8| Mus musculus chromosome 3, clone RP23-99I7, compl... 40 5.1
32gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, com... 40 5.1
33gb|AC133508.3| Mus musculus BAC clone RP23-383K24 from chromosom... 40 5.1
34gb|AC102087.12| Mus musculus chromosome 13, clone RP23-166D15, c... 40 5.1
35gb|AC110259.17| Mus musculus chromosome 5, clone RP23-287A8, com... 40 5.1
36gb|AC154722.2| Mus musculus BAC clone RP24-371J2 from chromosome... 40 5.1
37gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete ... 40 5.1
38emb|AL445930.11| Human DNA sequence from clone RP11-366O20 on ch... 40 5.1
39emb|AL356093.20| Human DNA sequence from clone RP11-382K22 on ch... 40 5.1
40emb|AL161773.21| Human DNA sequence from clone RP11-212E4 on chr... 40 5.1
41emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome 3, BA... 40 5.1
42emb|AL662792.21| Mouse DNA sequence from clone RP23-52L14 on chr... 40 5.1
43emb|BX640577.17| Zebrafish DNA sequence from clone DKEY-117O14 i... 40 5.1
44gb|AC074138.5| Homo sapiens chromosome 19 clone CTD-3234P18, com... 40 5.1
45gb|AC069074.11| Mus musculus 10 BAC RP23-243G3 (Roswell Park Can... 40 5.1
46gb|AC138177.12| Mus musculus chromosome 15, clone RP23-32P19, co... 40 5.1
47gb|AC020928.7| Homo sapiens chromosome 19 clone CTD-2162K18, com... 40 5.1
48dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
49dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
50dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
51gb|AC010203.14| Homo sapiens 12 BAC RP11-175P13 (Roswell Park Ca... 40 5.1
52dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
53dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.1
54dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
55dbj|AP005011.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
56dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.1
57emb|AL663098.8| Mouse DNA sequence from clone RP23-24L23 on chro... 40 5.1
58gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, compl... 40 5.1
59emb|AL845373.12| Mouse DNA sequence from clone RP23-211L7 on chr... 40 5.1
60gb|AF009957.1|AF009957 Penicillium marneffei cell wall antigen (... 40 5.1
61emb|CT025653.7| Mouse DNA sequence from clone RP23-62D21 on chro... 40 5.1
62gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, com... 40 5.1
63gb|AC167231.12| Mus musculus BAC RP23-416P12 (Roswell Park Canc... 40 5.1 
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07,
             complete sequence
          Length = 151399

 Score =  109 bits (55), Expect = 7e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                         
Query: 240   ctagcggtcagtctccagccagctcctcaggttgcacagggcctccggcgacaggccctt 299
             |||||| ||||||||||||||||||||||||||||||||||||||||  || |||| |||
Sbjct: 29097 ctagcgatcagtctccagccagctcctcaggttgcacagggcctccgcagagaggctctt 29038

                                
Query: 300   gcagctcctcggcctcgcc 318
             ||| |||||||||||||||
Sbjct: 29037 gcaactcctcggcctcgcc 29019
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>gb|AC118288.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077L08,
              complete sequence
          Length = 115640

 Score =  109 bits (55), Expect = 7e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                          
Query: 240    ctagcggtcagtctccagccagctcctcaggttgcacagggcctccggcgacaggccctt 299
              |||||| ||||||||||||||||||||||||||||||||||||||||  || |||| |||
Sbjct: 114994 ctagcgatcagtctccagccagctcctcaggttgcacagggcctccgcagagaggctctt 114935

                                 
Query: 300    gcagctcctcggcctcgcc 318
              ||| |||||||||||||||
Sbjct: 114934 gcaactcctcggcctcgcc 114916
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  109 bits (55), Expect = 7e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                           
Query: 240     ctagcggtcagtctccagccagctcctcaggttgcacagggcctccggcgacaggccctt 299
               |||||| ||||||||||||||||||||||||||||||||||||||||  || |||| |||
Sbjct: 1936220 ctagcgatcagtctccagccagctcctcaggttgcacagggcctccgcagagaggctctt 1936161

                                  
Query: 300     gcagctcctcggcctcgcc 318
               ||| |||||||||||||||
Sbjct: 1936160 gcaactcctcggcctcgcc 1936142
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>dbj|AK067074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093M04, full
            insert sequence
          Length = 1630

 Score =  109 bits (55), Expect = 7e-21
 Identities = 73/79 (92%)
 Strand = Plus / Minus

                                                                        
Query: 240  ctagcggtcagtctccagccagctcctcaggttgcacagggcctccggcgacaggccctt 299
            |||||| ||||||||||||||||||||||||||||||||||||||||  || |||| |||
Sbjct: 1369 ctagcgatcagtctccagccagctcctcaggttgcacagggcctccgcagagaggctctt 1310

                               
Query: 300  gcagctcctcggcctcgcc 318
            ||| |||||||||||||||
Sbjct: 1309 gcaactcctcggcctcgcc 1291
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>gb|AY112294.1| Zea mays CL24073_1 mRNA sequence
          Length = 529

 Score = 75.8 bits (38), Expect = 9e-11
 Identities = 61/68 (89%), Gaps = 3/68 (4%)
 Strand = Plus / Plus

                                                                       
Query: 253 tccagccagctcctcaggttgcacagggcctccggcgacaggcc---cttgcagctcctc 309
           |||||||||||||||||| ||||||| ||||||| |||||||||   |||||||||||| 
Sbjct: 192 tccagccagctcctcaggctgcacagcgcctccgtcgacaggcccttcttgcagctcctg 251

                   
Query: 310 ggcctcgc 317
           ||||||||
Sbjct: 252 ggcctcgc 259
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>gb|BT016547.1| Zea mays clone Contig380 mRNA sequence
          Length = 1061

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 62/70 (88%), Gaps = 3/70 (4%)
 Strand = Plus / Minus

                                                                       
Query: 253 tccagccagctcctcaggttgcacagggcctccggcgacaggcc---cttgcagctcctc 309
           |||||||||||||||||| ||||||| ||||||| |||||||||   |||||||||||| 
Sbjct: 808 tccagccagctcctcaggctgcacagcgcctccgtcgacaggcccttcttgcagctcctg 749

                     
Query: 310 ggcctcgccg 319
           ||||| ||||
Sbjct: 748 ggcctggccg 739
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>gb|AC158619.12| Mus musculus 10 BAC RP23-291O3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 250421

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 26    agagagagagaacacacatgaaa 48
             |||||||||||||||||||||||
Sbjct: 49516 agagagagagaacacacatgaaa 49538
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>gb|AC153510.10| Mus musculus 10 BAC RP23-151C4 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 197889

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 26     agagagagagaacacacatgaaa 48
              |||||||||||||||||||||||
Sbjct: 114640 agagagagagaacacacatgaaa 114662
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>gb|AC114689.4| Homo sapiens chromosome 18, clone RP11-638L3, complete sequence
          Length = 177781

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 24     aaagagagagagaacacacatga 46
              |||||||||||||||||||||||
Sbjct: 153940 aaagagagagagaacacacatga 153918
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>gb|AC100844.2| Homo sapiens chromosome 18, clone RP11-659F24, complete sequence
          Length = 165879

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 24   aaagagagagagaacacacatga 46
            |||||||||||||||||||||||
Sbjct: 7615 aaagagagagagaacacacatga 7593
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>gb|AC021561.8| Homo sapiens chromosome 18, clone RP11-766D3, complete sequence
          Length = 174508

 Score = 46.1 bits (23), Expect = 0.083
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 24     aaagagagagagaacacacatga 46
              |||||||||||||||||||||||
Sbjct: 125853 aaagagagagagaacacacatga 125831
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>gb|AC140426.3| Mus musculus BAC clone RP24-98A17 from chromosome 14, complete sequence
          Length = 189282

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 16    agggacgtaaagagagagagaacaca 41
             ||||||| ||||||||||||||||||
Sbjct: 90427 agggacggaaagagagagagaacaca 90402
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>gb|AC062015.7| Homo sapiens BAC clone CTD-2031E17 from 2, complete sequence
          Length = 144223

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 24     aaagagagagagaacacacatg 45
              ||||||||||||||||||||||
Sbjct: 100805 aaagagagagagaacacacatg 100826
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 172     gaacgaaccgaccagcagcac 192
               |||||||||||||||||||||
Sbjct: 3324185 gaacgaaccgaccagcagcac 3324205
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>gb|AC119875.7| Mus musculus chromosome 1, clone RP24-291C20, complete sequence
          Length = 162379

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 246   gtcagtctccagccagctcct 266
             |||||||||||||||||||||
Sbjct: 31910 gtcagtctccagccagctcct 31930
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>gb|AC124602.5| Mus musculus BAC clone RP23-37L7 from chromosome 7, complete sequence
          Length = 189065

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    agagagagagaacacacatga 46
             |||||||||||||||||||||
Sbjct: 63646 agagagagagaacacacatga 63626
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>gb|AC147677.4| Canis Familiaris, clone XX-25A1, complete sequence
          Length = 154021

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 26    agagagagagaacacacatga 46
             |||||||||||||||||||||
Sbjct: 62476 agagagagagaacacacatga 62496
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>gb|AC023286.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-86C14, complete
             sequence
          Length = 190251

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 190   cactaggcagggagcaggagc 210
             |||||||||||||||||||||
Sbjct: 54182 cactaggcagggagcaggagc 54162
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>gb|AC122182.4| Mus musculus BAC clone RP23-12G9 from 1, complete sequence
          Length = 197197

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 246    gtcagtctccagccagctcct 266
              |||||||||||||||||||||
Sbjct: 182875 gtcagtctccagccagctcct 182895
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>gb|AC126785.11| Medicago truncatula clone mth2-9i24, complete sequence
          Length = 132702

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    aaagagagagagaacacacat 44
             |||||||||||||||||||||
Sbjct: 12595 aaagagagagagaacacacat 12615
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>gb|AC025669.19| Mus musculus chromosome 14, clone RP23-5O16, complete sequence
          Length = 203826

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 23   taaagagagagagaacacaca 43
            |||||||||||||||||||||
Sbjct: 1795 taaagagagagagaacacaca 1775
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>gb|AC162178.2| Mus musculus BAC clone RP23-410H21 from chromosome 6, complete sequence
          Length = 188061

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 190    cactaggcagggagcaggagc 210
              |||||||||||||||||||||
Sbjct: 175318 cactaggcagggagcaggagc 175298
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>gb|AY029319.1| Zea mays seven transmembrane protein Mlo8 mRNA, complete cds
          Length = 1798

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 45  gaaacagtgggagaatggaat 65
           |||||||||||||||||||||
Sbjct: 612 gaaacagtgggagaatggaat 632
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>gb|AC007556.3| Homo sapiens BAC clone RP11-18C9 from 2, complete sequence
          Length = 167358

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 31    gagagaacacacatgaaacag 51
             |||||||||||||||||||||
Sbjct: 36012 gagagaacacacatgaaacag 36032
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>emb|BX548017.3| Mouse DNA sequence from clone RP23-335I21 on chromosome X, complete
             sequence
          Length = 77486

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    agagagagagaacacacatga 46
             |||||||||||||||||||||
Sbjct: 76808 agagagagagaacacacatga 76788
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>gb|AC149222.4| Mus musculus BAC clone RP23-325D10 from 7, complete sequence
          Length = 220651

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 26     agagagagagaacacacatga 46
              |||||||||||||||||||||
Sbjct: 135958 agagagagagaacacacatga 135978
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>gb|AY104078.1| Zea mays PCO070411 mRNA sequence
          Length = 1798

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 45  gaaacagtgggagaatggaat 65
           |||||||||||||||||||||
Sbjct: 612 gaaacagtgggagaatggaat 632
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>emb|AL929452.9| Mouse DNA sequence from clone RP23-345L15 on chromosome X, complete
            sequence
          Length = 221920

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 26   agagagagagaacacacatga 46
            |||||||||||||||||||||
Sbjct: 1322 agagagagagaacacacatga 1302
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>gb|AC139294.4| Mus musculus BAC clone RP24-239E14 from 14, complete sequence
          Length = 183363

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 23     taaagagagagagaacacaca 43
              |||||||||||||||||||||
Sbjct: 129666 taaagagagagagaacacaca 129646
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>gb|AC110244.10| Mus musculus chromosome 5, clone RP23-247E10, complete sequence
          Length = 214638

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    aagagagagagaacacacat 44
             ||||||||||||||||||||
Sbjct: 68141 aagagagagagaacacacat 68122
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>gb|AC104414.8| Mus musculus chromosome 3, clone RP23-99I7, complete sequence
          Length = 212613

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    agagagagagaacacacatg 45
             ||||||||||||||||||||
Sbjct: 60957 agagagagagaacacacatg 60938
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>gb|AC157797.5| Mus musculus chromosome 1, clone RP24-149G24, complete sequence
          Length = 157629

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    agagagagagaacacacatg 45
             ||||||||||||||||||||
Sbjct: 70665 agagagagagaacacacatg 70646
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>gb|AC133508.3| Mus musculus BAC clone RP23-383K24 from chromosome 3, complete sequence
          Length = 192136

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    agagagagagaacacacatg 45
             ||||||||||||||||||||
Sbjct: 41281 agagagagagaacacacatg 41300
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>gb|AC102087.12| Mus musculus chromosome 13, clone RP23-166D15, complete sequence
          Length = 221034

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     agagagagagaacacacatg 45
              ||||||||||||||||||||
Sbjct: 142662 agagagagagaacacacatg 142643
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>gb|AC110259.17| Mus musculus chromosome 5, clone RP23-287A8, complete sequence
          Length = 230585

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    agagagagagaacacacatg 45
             ||||||||||||||||||||
Sbjct: 81762 agagagagagaacacacatg 81781
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>gb|AC154722.2| Mus musculus BAC clone RP24-371J2 from chromosome 9, complete sequence
          Length = 186951

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     agagagagagaacacacatg 45
              ||||||||||||||||||||
Sbjct: 185707 agagagagagaacacacatg 185688
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>gb|AC149580.19| Medicago truncatula clone mth2-123f14, complete sequence
          Length = 123565

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    aaagagagagagaacacaca 43
             ||||||||||||||||||||
Sbjct: 53892 aaagagagagagaacacaca 53911
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>emb|AL445930.11| Human DNA sequence from clone RP11-366O20 on chromosome 9 Contains the
             5' end of a novel gene, the PPP6C gene for protein
             phosphatase 6 (catalytic subunit), a novel gene, a
             phosphoribosyl pyrophosphate synthetase 1(PRPS1)
             pseudogene, a laminin receptor 1 (LAMR1) pseudogene, the
             5' end of the gene for Rab9 effector p40 (RAB9P40), and
             five CpG islands, complete sequence
          Length = 169149

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    agagagagagaacacacatg 45
             ||||||||||||||||||||
Sbjct: 82752 agagagagagaacacacatg 82771



 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    agagagagagaacacacatg 45
             ||||||||||||||||||||
Sbjct: 82583 agagagagagaacacacatg 82602
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>emb|AL356093.20| Human DNA sequence from clone RP11-382K22 on chromosome 10 Contains a
             ribosomal protein L7 (RPL7) pseudogene, complete sequence
          Length = 200536

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    gagagagaacacacatgaaa 48
             ||||||||||||||||||||
Sbjct: 76648 gagagagaacacacatgaaa 76667
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>emb|AL161773.21| Human DNA sequence from clone RP11-212E4 on chromosome 13 Contains the
             5' end of the COL4A1 gene for collagen type IV alpha 1,
             the 5' end of the COL4A2 gene for collagen type IV alpha 2
             and three CpG islands, complete sequence
          Length = 154195

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 24    aaagagagagagaacacaca 43
             ||||||||||||||||||||
Sbjct: 83009 aaagagagagagaacacaca 83028
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>emb|AL137081.1|ATF9D24 Arabidopsis thaliana DNA chromosome 3, BAC clone F9D24
          Length = 105306

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     aaagagagagagaacacaca 43
              ||||||||||||||||||||
Sbjct: 104509 aaagagagagagaacacaca 104528
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>emb|AL662792.21| Mouse DNA sequence from clone RP23-52L14 on chromosome 11, complete
              sequence
          Length = 164120

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     agagagagagaacacacatg 45
              ||||||||||||||||||||
Sbjct: 107420 agagagagagaacacacatg 107401
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>emb|BX640577.17| Zebrafish DNA sequence from clone DKEY-117O14 in linkage group 14,
             complete sequence
          Length = 214178

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    aagagagagagaacacacat 44
             ||||||||||||||||||||
Sbjct: 57391 aagagagagagaacacacat 57372
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>gb|AC074138.5| Homo sapiens chromosome 19 clone CTD-3234P18, complete sequence
          Length = 200418

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 24     aaagagagagagaacacaca 43
              ||||||||||||||||||||
Sbjct: 193988 aaagagagagagaacacaca 194007
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>gb|AC069074.11| Mus musculus 10 BAC RP23-243G3 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 190081

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 24    aaagagagagagaacacacatgaa 47
             |||||||||||||||||| |||||
Sbjct: 58979 aaagagagagagaacacaaatgaa 59002
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>gb|AC138177.12| Mus musculus chromosome 15, clone RP23-32P19, complete sequence
          Length = 180896

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    agagagagagaacacacatg 45
             ||||||||||||||||||||
Sbjct: 76790 agagagagagaacacacatg 76809
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>gb|AC020928.7| Homo sapiens chromosome 19 clone CTD-2162K18, complete sequence
          Length = 109666

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 24   aaagagagagagaacacaca 43
            ||||||||||||||||||||
Sbjct: 993  aaagagagagagaacacaca 1012
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 304     ctcctcggcctcgccgcaac 323
               ||||||||||||||||||||
Sbjct: 1111614 ctcctcggcctcgccgcaac 1111633
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 41       acatgaaacagtgggagaat 60
                ||||||||||||||||||||
Sbjct: 13303249 acatgaaacagtgggagaat 13303230
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 27       gagagagagaacacacatga 46
                ||||||||||||||||||||
Sbjct: 34406109 gagagagagaacacacatga 34406128
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>gb|AC010203.14| Homo sapiens 12 BAC RP11-175P13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 167569

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ggagcaggagcagtagagca 219
             ||||||||||||||||||||
Sbjct: 29119 ggagcaggagcagtagagca 29100
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>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0468B07
          Length = 169071

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    gagagagagaacacacatga 46
             ||||||||||||||||||||
Sbjct: 88453 gagagagagaacacacatga 88472
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 174     acgaaccgaccagcagcactaggc 197
               |||||||| |||||||||||||||
Sbjct: 1076685 acgaaccgtccagcagcactaggc 1076662
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>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0660D08
          Length = 146915

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   ctcctcggcctcgccgcaac 323
             ||||||||||||||||||||
Sbjct: 87837 ctcctcggcctcgccgcaac 87856
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>dbj|AP005011.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0622F08
          Length = 140628

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     acatgaaacagtgggagaat 60
              ||||||||||||||||||||
Sbjct: 111176 acatgaaacagtgggagaat 111157
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>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1521_G01
          Length = 144102

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 41    acatgaaacagtgggagaat 60
             ||||||||||||||||||||
Sbjct: 28500 acatgaaacagtgggagaat 28481
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>emb|AL663098.8| Mouse DNA sequence from clone RP23-24L23 on chromosome X, complete
              sequence
          Length = 227133

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     agagagagagaacacacatg 45
              ||||||||||||||||||||
Sbjct: 149201 agagagagagaacacacatg 149182
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>gb|AC102777.12| Mus musculus chromosome 1, clone RP23-5K7, complete sequence
          Length = 195874

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 26     agagagagagaacacacatg 45
              ||||||||||||||||||||
Sbjct: 159672 agagagagagaacacacatg 159691
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>emb|AL845373.12| Mouse DNA sequence from clone RP23-211L7 on chromosome 2, complete
             sequence
          Length = 228651

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 24    aaagagagagagaacacaca 43
             ||||||||||||||||||||
Sbjct: 51297 aaagagagagagaacacaca 51278
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>gb|AF009957.1|AF009957 Penicillium marneffei cell wall antigen (MP1) mRNA, complete cds
          Length = 1549

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 198  agggagcaggagcagtagag 217
            ||||||||||||||||||||
Sbjct: 1121 agggagcaggagcagtagag 1102
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>emb|CT025653.7| Mouse DNA sequence from clone RP23-62D21 on chromosome 9, complete
             sequence
          Length = 256470

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 26    agagagagagaacacacatg 45
             ||||||||||||||||||||
Sbjct: 68727 agagagagagaacacacatg 68708
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>gb|AC170255.8| Mus musculus chromosome 1, clone RP23-359K18, complete sequence
          Length = 226189

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     agagagagagaacacacatg 45
              ||||||||||||||||||||
Sbjct: 126490 agagagagagaacacacatg 126471
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>gb|AC167231.12| Mus musculus  BAC RP23-416P12 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 205781

 Score = 40.1 bits (20), Expect = 5.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 24    aaagagagagagaacacacatgaa 47
             |||||||||||||||||| |||||
Sbjct: 14898 aaagagagagagaacacaaatgaa 14875


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,848,848
Number of Sequences: 3902068
Number of extensions: 7848848
Number of successful extensions: 114574
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114228
Number of HSP's gapped (non-prelim): 344
length of query: 385
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 363
effective length of database: 17,147,199,772
effective search space: 6224433517236
effective search space used: 6224433517236
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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