Clone Name | rbart31g07 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_196510.1| Oryza sativa (japonica cultivar-group) putative epimerase/dehydratase (OSJNBa0061K21.15), mRNA Length = 1137 Score = 365 bits (184), Expect = 1e-97 Identities = 298/336 (88%) Strand = Plus / Minus Query: 194 ttactccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacac 253 |||||||||||| || || || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 1137 ttactccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacac 1078 Query: 254 caccttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctg 313 |||||||||||| ||||| | |||| ||| |||| |||| |||||||||| ||||| Sbjct: 1077 caccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctg 1018 Query: 314 ctccttgatccagaagtaggtgaaccttaggccatccttgagcttcattgtgggggccca 373 ||||||||||||||||||||||||||| || || |||||||||||||||||||| ||||| Sbjct: 1017 ctccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgccca 958 Query: 374 gccaagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctctggacc 433 |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| || || Sbjct: 957 gccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtcc 898 Query: 434 agggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagccatctc 493 |||||||||||||||||| |||| | | |||||||||| ||||| || ||||||||||| Sbjct: 897 agggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctc 838 Query: 494 gttcatgctcaccatttcatcacttccaatgttcac 529 ||||||||| ||||||||||| |||||||||||||| Sbjct: 837 gttcatgcttaccatttcatcgcttccaatgttcac 802
>dbj|AB193582.1| Oryza sativa (japonica cultivar-group) OsGME-1 mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1212 Score = 365 bits (184), Expect = 1e-97 Identities = 298/336 (88%) Strand = Plus / Minus Query: 194 ttactccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacac 253 |||||||||||| || || || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 1173 ttactccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacac 1114 Query: 254 caccttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctg 313 |||||||||||| ||||| | |||| ||| |||| |||| |||||||||| ||||| Sbjct: 1113 caccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctg 1054 Query: 314 ctccttgatccagaagtaggtgaaccttaggccatccttgagcttcattgtgggggccca 373 ||||||||||||||||||||||||||| || || |||||||||||||||||||| ||||| Sbjct: 1053 ctccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgccca 994 Query: 374 gccaagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctctggacc 433 |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| || || Sbjct: 993 gccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtcc 934 Query: 434 agggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagccatctc 493 |||||||||||||||||| |||| | | |||||||||| ||||| || ||||||||||| Sbjct: 933 agggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctc 874 Query: 494 gttcatgctcaccatttcatcacttccaatgttcac 529 ||||||||| ||||||||||| |||||||||||||| Sbjct: 873 gttcatgcttaccatttcatcgcttccaatgttcac 838
>dbj|AK104822.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-B04, full insert sequence Length = 1587 Score = 365 bits (184), Expect = 1e-97 Identities = 298/336 (88%) Strand = Plus / Minus Query: 194 ttactccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacac 253 |||||||||||| || || || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 1258 ttactccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacac 1199 Query: 254 caccttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctg 313 |||||||||||| ||||| | |||| ||| |||| |||| |||||||||| ||||| Sbjct: 1198 caccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctg 1139 Query: 314 ctccttgatccagaagtaggtgaaccttaggccatccttgagcttcattgtgggggccca 373 ||||||||||||||||||||||||||| || || |||||||||||||||||||| ||||| Sbjct: 1138 ctccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgccca 1079 Query: 374 gccaagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctctggacc 433 |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| || || Sbjct: 1078 gccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtcc 1019 Query: 434 agggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagccatctc 493 |||||||||||||||||| |||| | | |||||||||| ||||| || ||||||||||| Sbjct: 1018 agggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctc 959 Query: 494 gttcatgctcaccatttcatcacttccaatgttcac 529 ||||||||| ||||||||||| |||||||||||||| Sbjct: 958 gttcatgcttaccatttcatcgcttccaatgttcac 923
>dbj|AK069385.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023012D14, full insert sequence Length = 1592 Score = 365 bits (184), Expect = 1e-97 Identities = 298/336 (88%) Strand = Plus / Minus Query: 194 ttactccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacac 253 |||||||||||| || || || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 1263 ttactccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacac 1204 Query: 254 caccttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctg 313 |||||||||||| ||||| | |||| ||| |||| |||| |||||||||| ||||| Sbjct: 1203 caccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctg 1144 Query: 314 ctccttgatccagaagtaggtgaaccttaggccatccttgagcttcattgtgggggccca 373 ||||||||||||||||||||||||||| || || |||||||||||||||||||| ||||| Sbjct: 1143 ctccttgatccagaagtaggtgaacctcagcccgtccttgagcttcattgtgggtgccca 1084 Query: 374 gccaagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctctggacc 433 |||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| || || Sbjct: 1083 gccaagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtcc 1024 Query: 434 agggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagccatctc 493 |||||||||||||||||| |||| | | |||||||||| ||||| || ||||||||||| Sbjct: 1023 agggatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctc 964 Query: 494 gttcatgctcaccatttcatcacttccaatgttcac 529 ||||||||| ||||||||||| |||||||||||||| Sbjct: 963 gttcatgcttaccatttcatcgcttccaatgttcac 928
>gb|AY104279.1| Zea mays PCO103545 mRNA sequence Length = 1547 Score = 351 bits (177), Expect = 1e-93 Identities = 294/333 (88%) Strand = Plus / Minus Query: 197 ctccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacaccac 256 |||||||||||| || ||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 1253 ctccttgccgtcggcggcgcggagggagcccagctgcacgggcgcctgggtggacaccac 1194 Query: 257 cttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctgctc 316 |||||| || |||||| |||| ||| ||||| ||| ||||||||||||||||||| Sbjct: 1193 cttggacgacccgtacgccgcgatgtcgaccccctgcgtcttctccttctcgatctgctc 1134 Query: 317 cttgatccagaagtaggtgaaccttaggccatccttgagcttcattgtgggggcccagcc 376 |||||||||||||||||||||| || ||||||||||||||||| || ||||||||||| Sbjct: 1133 tttgatccagaagtaggtgaaccgcagcccatccttgagcttcatcgtcggggcccagcc 1074 Query: 377 aagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctctggaccagg 436 ||||||||||||||| |||||||||||||||||||| |||||||| || || || ||||| Sbjct: 1073 aagcttctccttgataagggtgttgtcagagttgcgcccgcggaccccttccgggccagg 1014 Query: 437 gatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagccatctcgtt 496 ||||||||||||||| |||||| | ||||| ||||| || || ||||||||||||||||| Sbjct: 1013 gatgtggtggatgggcagcttcctatcctcaaagcccagcacgatctcagccatctcgtt 954 Query: 497 catgctcaccatttcatcacttccaatgttcac 529 |||||||||||| ||||| ||||| |||||||| Sbjct: 953 catgctcaccatctcatcgcttccgatgttcac 921
>gb|BT016578.1| Zea mays clone Contig411 mRNA sequence Length = 1538 Score = 319 bits (161), Expect = 5e-84 Identities = 290/333 (87%) Strand = Plus / Minus Query: 197 ctccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacaccac 256 |||||||||||| || | ||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 1251 ctccttgccgtcggcggggcggagggagcccagctgcacgggcgcctgggtggacaccac 1192 Query: 257 cttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctgctc 316 |||||| || |||||| |||| ||| ||||| || ||||||| |||||||| || Sbjct: 1191 cttggacgacccgtacgccgcgatgtcgaccccctgcgtgttctccttgtcgatctggtc 1132 Query: 317 cttgatccagaagtaggtgaaccttaggccatccttgagcttcattgtgggggcccagcc 376 |||||||||||||||||||||| || ||||||||||||||||| || ||||||||||| Sbjct: 1131 tttgatccagaagtaggtgaaccgcagcccatccttgagcttcatcgtcggggcccagcc 1072 Query: 377 aagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctctggaccagg 436 ||||||||||||||| |||||||||||||||||||| |||||||| || || || ||||| Sbjct: 1071 aagcttctccttgataagggtgttgtcagagttgcgcccgcggaccccttccgggccagg 1012 Query: 437 gatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagccatctcgtt 496 ||||||||||||||| |||||| | ||||| ||||| || || ||||||||||||||||| Sbjct: 1011 gatgtggtggatgggcagcttcctatcctcaaagcccagcacgatctcagccatctcgtt 952 Query: 497 catgctcaccatttcatcacttccaatgttcac 529 |||||||||||| ||||| ||||| |||||||| Sbjct: 951 catgctcaccatctcatcgcttccgatgttcac 919
>dbj|AK102348.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091C16, full insert sequence Length = 1533 Score = 260 bits (131), Expect = 4e-66 Identities = 284/333 (85%), Gaps = 4/333 (1%) Strand = Plus / Minus Query: 196 actccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacacca 255 ||||||| || ||||| || ||||||||||| ||||||||||| ||||| || ||| | Sbjct: 1189 actcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtctgcacta 1130 Query: 256 ccttggatgatccgtaccgggcgac--gtccttcccctcggtcctctccttctcgatctg 313 |||||||||| ||||| || |||| ||| ||||||| | |||||||||||| ||| Sbjct: 1129 ccttggatgacccgta--ggccgacaagtcgacgccctcggccttctccttctcgagctg 1072 Query: 314 ctccttgatccagaagtaggtgaaccttaggccatccttgagcttcattgtgggggccca 373 |||||||||||||||||| |||| ||| || |||||||| ||| |||| || || ||||| Sbjct: 1071 ctccttgatccagaagtatgtgatcctcagaccatccttcagcctcatggttggagccca 1012 Query: 374 gccaagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctctggacc 433 |||||||||||| |||||||| |||||||| |||||||| || |||||||||||||| || Sbjct: 1011 gccaagcttctctttgatgagcgtgttgtcggagttgcgaccacggacaccctctggccc 952 Query: 434 agggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagccatctc 493 ||||||||||||||||| |||| ||||| ||| |||| ||| || |||||||||||||| Sbjct: 951 ggggatgtggtggatgggcagctgcttgttctcaaagctgaggactatctcagccatctc 892 Query: 494 gttcatgctcaccatttcatcacttccaatgtt 526 |||||||| ||||||||||||||||||||||| Sbjct: 891 attcatgctgaccatttcatcacttccaatgtt 859
>gb|AC016780.6| Genomic Sequence For Oryza sativa (japonica cultivar-group) cultivar Nipponbare Clone OSJNBa0061K21 From Chromosome 10, complete sequence Length = 112721 Score = 232 bits (117), Expect = 9e-58 Identities = 165/181 (91%) Strand = Plus / Minus Query: 349 ccttgagcttcattgtgggggcccagccaagcttctccttgatgagggtgttgtcagagt 408 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 68188 ccttgagcttcattgtgggtgcccagccaagcttctccttgatgagggtgttgtcggagt 68129 Query: 409 tgcggccgcggacaccctctggaccagggatgtggtggatgggtagcttcttgtcctcga 468 | ||||| ||||||||||| || |||||||||||||||||||| |||| | | ||||||| Sbjct: 68128 tacggccacggacaccctcgggtccagggatgtggtggatgggcagctccctatcctcga 68069 Query: 469 agccgagaacaatctcagccatctcgttcatgctcaccatttcatcacttccaatgttca 528 ||| ||||| || |||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 68068 agctgagaatgatttcagccatctcgttcatgcttaccatttcatcgcttccaatgttca 68009 Query: 529 c 529 | Sbjct: 68008 c 68008 Score = 141 bits (71), Expect = 3e-30 Identities = 128/147 (87%) Strand = Plus / Minus Query: 194 ttactccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacac 253 |||||||||||| || || || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 68476 ttactccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacac 68417 Query: 254 caccttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctg 313 |||||||||||| ||||| | |||| ||| |||| |||| |||||||||| ||||| Sbjct: 68416 caccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctg 68357 Query: 314 ctccttgatccagaagtaggtgaacct 340 ||||||||||||||||||||||||||| Sbjct: 68356 ctccttgatccagaagtaggtgaacct 68330
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 232 bits (117), Expect = 9e-58 Identities = 165/181 (91%) Strand = Plus / Minus Query: 349 ccttgagcttcattgtgggggcccagccaagcttctccttgatgagggtgttgtcagagt 408 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 14128550 ccttgagcttcattgtgggtgcccagccaagcttctccttgatgagggtgttgtcggagt 14128491 Query: 409 tgcggccgcggacaccctctggaccagggatgtggtggatgggtagcttcttgtcctcga 468 | ||||| ||||||||||| || |||||||||||||||||||| |||| | | ||||||| Sbjct: 14128490 tacggccacggacaccctcgggtccagggatgtggtggatgggcagctccctatcctcga 14128431 Query: 469 agccgagaacaatctcagccatctcgttcatgctcaccatttcatcacttccaatgttca 528 ||| ||||| || |||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 14128430 agctgagaatgatttcagccatctcgttcatgcttaccatttcatcgcttccaatgttca 14128371 Query: 529 c 529 | Sbjct: 14128370 c 14128370 Score = 141 bits (71), Expect = 3e-30 Identities = 128/147 (87%) Strand = Plus / Minus Query: 194 ttactccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacac 253 |||||||||||| || || || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 14128838 ttactccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacac 14128779 Query: 254 caccttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctg 313 |||||||||||| ||||| | |||| ||| |||| |||| |||||||||| ||||| Sbjct: 14128778 caccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctg 14128719 Query: 314 ctccttgatccagaagtaggtgaacct 340 ||||||||||||||||||||||||||| Sbjct: 14128718 ctccttgatccagaagtaggtgaacct 14128692
>gb|AC027658.1| Oryza sativa (japonica cultivar-group) BAC nbxb0006I13 chromosome 10, complete sequence Length = 142737 Score = 232 bits (117), Expect = 9e-58 Identities = 165/181 (91%) Strand = Plus / Minus Query: 349 ccttgagcttcattgtgggggcccagccaagcttctccttgatgagggtgttgtcagagt 408 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 623 ccttgagcttcattgtgggtgcccagccaagcttctccttgatgagggtgttgtcggagt 564 Query: 409 tgcggccgcggacaccctctggaccagggatgtggtggatgggtagcttcttgtcctcga 468 | ||||| ||||||||||| || |||||||||||||||||||| |||| | | ||||||| Sbjct: 563 tacggccacggacaccctcgggtccagggatgtggtggatgggcagctccctatcctcga 504 Query: 469 agccgagaacaatctcagccatctcgttcatgctcaccatttcatcacttccaatgttca 528 ||| ||||| || |||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 503 agctgagaatgatttcagccatctcgttcatgcttaccatttcatcgcttccaatgttca 444 Query: 529 c 529 | Sbjct: 443 c 443 Score = 141 bits (71), Expect = 3e-30 Identities = 128/147 (87%) Strand = Plus / Minus Query: 194 ttactccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacac 253 |||||||||||| || || || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 911 ttactccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacac 852 Query: 254 caccttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctg 313 |||||||||||| ||||| | |||| ||| |||| |||| |||||||||| ||||| Sbjct: 851 caccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctg 792 Query: 314 ctccttgatccagaagtaggtgaacct 340 ||||||||||||||||||||||||||| Sbjct: 791 ctccttgatccagaagtaggtgaacct 765
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 232 bits (117), Expect = 9e-58 Identities = 165/181 (91%) Strand = Plus / Minus Query: 349 ccttgagcttcattgtgggggcccagccaagcttctccttgatgagggtgttgtcagagt 408 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 14136792 ccttgagcttcattgtgggtgcccagccaagcttctccttgatgagggtgttgtcggagt 14136733 Query: 409 tgcggccgcggacaccctctggaccagggatgtggtggatgggtagcttcttgtcctcga 468 | ||||| ||||||||||| || |||||||||||||||||||| |||| | | ||||||| Sbjct: 14136732 tacggccacggacaccctcgggtccagggatgtggtggatgggcagctccctatcctcga 14136673 Query: 469 agccgagaacaatctcagccatctcgttcatgctcaccatttcatcacttccaatgttca 528 ||| ||||| || |||||||||||||||||||| ||||||||||| ||||||||||||| Sbjct: 14136672 agctgagaatgatttcagccatctcgttcatgcttaccatttcatcgcttccaatgttca 14136613 Query: 529 c 529 | Sbjct: 14136612 c 14136612 Score = 141 bits (71), Expect = 3e-30 Identities = 128/147 (87%) Strand = Plus / Minus Query: 194 ttactccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacac 253 |||||||||||| || || || ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 14137080 ttactccttgccatcggcagcacggagggagcccagctgaaccggggcctgggtggacac 14137021 Query: 254 caccttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctg 313 |||||||||||| ||||| | |||| ||| |||| |||| |||||||||| ||||| Sbjct: 14137020 caccttggatgagccgtaacccgcgatgtcgacgccctgggtcttctccttctctatctg 14136961 Query: 314 ctccttgatccagaagtaggtgaacct 340 ||||||||||||||||||||||||||| Sbjct: 14136960 ctccttgatccagaagtaggtgaacct 14136934
>gb|AY106775.1| Zea mays PCO117540 mRNA sequence Length = 541 Score = 206 bits (104), Expect = 5e-50 Identities = 263/316 (83%) Strand = Plus / Minus Query: 196 actccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacacca 255 |||||||||| ||||| |||||||||||||| ||||| ||||| |||||||| ||| | Sbjct: 317 actccttgccatcagcggcgcggagggagccgagctgaaccggggcctgtgtctgcacga 258 Query: 256 ccttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctgct 315 |||||||||||||||| | | ||| | ||||||| | |||||||||| | ||||| Sbjct: 257 ccttggatgatccgtagaccgacagatccatgccctcggccttctccttctcaagctgct 198 Query: 316 ccttgatccagaagtaggtgaaccttaggccatccttgagcttcattgtgggggcccagc 375 ||||||||||| |||| |||| ||| || || ||||| ||| |||| || || ||||||| Sbjct: 197 ccttgatccaggagtacgtgatcctcagcccgtccttcagcctcatagtcggagcccagc 138 Query: 376 caagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctctggaccag 435 ||||||||||||||||||| |||||||| |||||||| || || || ||||| || || | Sbjct: 137 caagcttctccttgatgagcgtgttgtctgagttgcgcccacgcacgccctccggcccgg 78 Query: 436 ggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagccatctcgt 495 |||||||||||||||| |||| ||||| ||| |||| || || || || |||||||||| Sbjct: 77 ggatgtggtggatgggcagctgcttgttctcaaagctcaggaccatttccgccatctcgt 18 Query: 496 tcatgctcaccatttc 511 |||||||||||||||| Sbjct: 17 tcatgctcaccatttc 2
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10, complete sequence Length = 170681 Score = 186 bits (94), Expect = 5e-44 Identities = 142/158 (89%) Strand = Plus / Plus Query: 369 gcccagccaagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctct 428 ||||||||||||||||| |||||||| |||||||| |||||||| || |||||||||||| Sbjct: 130037 gcccagccaagcttctctttgatgagcgtgttgtcggagttgcgaccacggacaccctct 130096 Query: 429 ggaccagggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagcc 488 || || ||||||||||||||||| |||| ||||| ||| |||| ||| || ||||||||| Sbjct: 130097 ggcccggggatgtggtggatgggcagctgcttgttctcaaagctgaggactatctcagcc 130156 Query: 489 atctcgttcatgctcaccatttcatcacttccaatgtt 526 ||||| |||||||| ||||||||||||||||||||||| Sbjct: 130157 atctcattcatgctgaccatttcatcacttccaatgtt 130194 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/158 (82%), Gaps = 4/158 (2%) Strand = Plus / Plus Query: 196 actccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacacca 255 ||||||| || ||||| || ||||||||||| ||||||||||| ||||| || ||| | Sbjct: 129761 actcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtctgcacta 129820 Query: 256 ccttggatgatccgtaccgggcgac--gtccttcccctcggtcctctccttctcgatctg 313 |||||||||| ||||| || |||| ||| ||||||| | |||||||||||| ||| Sbjct: 129821 ccttggatgacccgta--ggccgacaagtcgacgccctcggccttctccttctcgagctg 129878 Query: 314 ctccttgatccagaagtaggtgaaccttaggccatcct 351 |||||||||||||||||| |||| ||| || ||||||| Sbjct: 129879 ctccttgatccagaagtatgtgatcctcagaccatcct 129916
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 186 bits (94), Expect = 5e-44 Identities = 142/158 (89%) Strand = Plus / Plus Query: 369 gcccagccaagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctct 428 ||||||||||||||||| |||||||| |||||||| |||||||| || |||||||||||| Sbjct: 21606518 gcccagccaagcttctctttgatgagcgtgttgtcggagttgcgaccacggacaccctct 21606577 Query: 429 ggaccagggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagcc 488 || || ||||||||||||||||| |||| ||||| ||| |||| ||| || ||||||||| Sbjct: 21606578 ggcccggggatgtggtggatgggcagctgcttgttctcaaagctgaggactatctcagcc 21606637 Query: 489 atctcgttcatgctcaccatttcatcacttccaatgtt 526 ||||| |||||||| ||||||||||||||||||||||| Sbjct: 21606638 atctcattcatgctgaccatttcatcacttccaatgtt 21606675 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/158 (82%), Gaps = 4/158 (2%) Strand = Plus / Plus Query: 196 actccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacacca 255 ||||||| || ||||| || ||||||||||| ||||||||||| ||||| || ||| | Sbjct: 21606242 actcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtctgcacta 21606301 Query: 256 ccttggatgatccgtaccgggcgac--gtccttcccctcggtcctctccttctcgatctg 313 |||||||||| ||||| || |||| ||| ||||||| | |||||||||||| ||| Sbjct: 21606302 ccttggatgacccgta--ggccgacaagtcgacgccctcggccttctccttctcgagctg 21606359 Query: 314 ctccttgatccagaagtaggtgaaccttaggccatcct 351 |||||||||||||||||| |||| ||| || ||||||| Sbjct: 21606360 ctccttgatccagaagtatgtgatcctcagaccatcct 21606397
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 186 bits (94), Expect = 5e-44 Identities = 142/158 (89%) Strand = Plus / Plus Query: 369 gcccagccaagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctct 428 ||||||||||||||||| |||||||| |||||||| |||||||| || |||||||||||| Sbjct: 21916717 gcccagccaagcttctctttgatgagcgtgttgtcggagttgcgaccacggacaccctct 21916776 Query: 429 ggaccagggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagcc 488 || || ||||||||||||||||| |||| ||||| ||| |||| ||| || ||||||||| Sbjct: 21916777 ggcccggggatgtggtggatgggcagctgcttgttctcaaagctgaggactatctcagcc 21916836 Query: 489 atctcgttcatgctcaccatttcatcacttccaatgtt 526 ||||| |||||||| ||||||||||||||||||||||| Sbjct: 21916837 atctcattcatgctgaccatttcatcacttccaatgtt 21916874 Score = 79.8 bits (40), Expect = 8e-12 Identities = 130/158 (82%), Gaps = 4/158 (2%) Strand = Plus / Plus Query: 196 actccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacacca 255 ||||||| || ||||| || ||||||||||| ||||||||||| ||||| || ||| | Sbjct: 21916441 actcctttccatcagcagcacggagggagccaagctgcaccggcgcctgagtctgcacta 21916500 Query: 256 ccttggatgatccgtaccgggcgac--gtccttcccctcggtcctctccttctcgatctg 313 |||||||||| ||||| || |||| ||| ||||||| | |||||||||||| ||| Sbjct: 21916501 ccttggatgacccgta--ggccgacaagtcgacgccctcggccttctccttctcgagctg 21916558 Query: 314 ctccttgatccagaagtaggtgaaccttaggccatcct 351 |||||||||||||||||| |||| ||| || ||||||| Sbjct: 21916559 ctccttgatccagaagtatgtgatcctcagaccatcct 21916596
>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence Length = 144651 Score = 184 bits (93), Expect = 2e-43 Identities = 138/153 (90%) Strand = Plus / Minus Query: 377 aagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctctggaccagg 436 ||||||||||||||||||||||||||| ||||| ||||| ||||||||||| || ||||| Sbjct: 144651 aagcttctccttgatgagggtgttgtcggagttacggccacggacaccctcgggtccagg 144592 Query: 437 gatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagccatctcgtt 496 ||||||||||||||| |||| | | |||||||||| ||||| || |||||||||||||| Sbjct: 144591 gatgtggtggatgggcagctccctatcctcgaagctgagaatgatttcagccatctcgtt 144532 Query: 497 catgctcaccatttcatcacttccaatgttcac 529 |||||| ||||||||||| |||||||||||||| Sbjct: 144531 catgcttaccatttcatcgcttccaatgttcac 144499
>gb|DQ268848.1| Solanum tuberosum clone 155B09 NAD-dependent epimerase/dehydratase family protein-like protein mRNA, complete cds Length = 1521 Score = 159 bits (80), Expect = 1e-35 Identities = 194/232 (83%) Strand = Plus / Minus Query: 298 tctccttctcgatctgctccttgatccagaagtaggtgaaccttaggccatccttgagct 357 |||| ||||||||||||||||||||||||||||| || | || || |||||||| | Sbjct: 1051 tctctttctcgatctgctccttgatccagaagtatgtaattctcagaccatccttcaatc 992 Query: 358 tcattgtgggggcccagccaagcttctccttgatgagggtgttgtcagagttgcggccgc 417 ||||||| || ||||| ||||||||||| || || || |||||||| |||||||| || | Sbjct: 991 tcattgttggagcccaaccaagcttctcttttatcagtgtgttgtctgagttgcgaccac 932 Query: 418 ggacaccctctggaccagggatgtggtggatgggtagcttcttgtcctcgaagccgagaa 477 |||| || ||||| || || ||||| |||| | |||||||||||||| |||| ||||| Sbjct: 931 ggacgccttctgggcctggaatgtgttggacagcaagcttcttgtcctcaaagctgagaa 872 Query: 478 caatctcagccatctcgttcatgctcaccatttcatcacttccaatgttcac 529 | |||||||||||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 871 ccatctcagccatctcattcatgctgaccatctcatcacttcctatgttcac 820
>gb|DQ207722.1| Zea mays cultivar B73 IDP512 marker Length = 527 Score = 147 bits (74), Expect = 4e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 349 ccttgagcttcattgtgggggcccagccaagcttctccttgatgagggtgttgtcagagt 408 ||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 351 ccttgagcttcatcgtcggggcccagccaagcttctccttgataagggtgttgtcagagt 410 Query: 409 tgcggccgcggacaccctctggaccagggatgtggtggatgggtagcttc 458 |||| |||||||| || || || |||||||||||||||||||| |||||| Sbjct: 411 tgcgcccgcggaccccttccgggccagggatgtggtggatgggcagcttc 460 Score = 141 bits (71), Expect = 3e-30 Identities = 125/143 (87%) Strand = Plus / Plus Query: 197 ctccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacaccac 256 |||||||||||| || ||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 107 ctccttgccgtcggcggcgcggagggagcccagctgcacgggcgcctgggtggacaccac 166 Query: 257 cttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctgctc 316 |||||| || |||||| |||| ||| ||||| ||| ||||||||||||||||||| Sbjct: 167 cttggacgacccgtacgccgcgatgtcgaccccctgcgtcttctccttctcgatctgctc 226 Query: 317 cttgatccagaagtaggtgaacc 339 |||||||||||||||||||||| Sbjct: 227 tttgatccagaagtaggtgaacc 249
>gb|DQ207723.1| Zea mays cultivar inbred line Mo17 IDP512 marker Length = 473 Score = 141 bits (71), Expect = 3e-30 Identities = 125/143 (87%) Strand = Plus / Plus Query: 197 ctccttgccgtcagccgcgcggagggagcccagctgcaccggtgcctgtgtggacaccac 256 |||||||||||| || ||||||||||||||||||||||| || ||||| ||||||||||| Sbjct: 115 ctccttgccgtcggcggcgcggagggagcccagctgcacgggcgcctgggtggacaccac 174 Query: 257 cttggatgatccgtaccgggcgacgtccttcccctcggtcctctccttctcgatctgctc 316 |||||| || |||||| |||| ||| ||||| ||| ||||||||||||||||||| Sbjct: 175 cttggacgacccgtacgccgcgatgtcgaccccctgcgtcttctccttctcgatctgctc 234 Query: 317 cttgatccagaagtaggtgaacc 339 |||||||||||||||||||||| Sbjct: 235 tttgatccagaagtaggtgaacc 257 Score = 139 bits (70), Expect = 1e-29 Identities = 94/102 (92%) Strand = Plus / Plus Query: 349 ccttgagcttcattgtgggggcccagccaagcttctccttgatgagggtgttgtcagagt 408 ||||||||||||| || |||||||||||||||||||||||||| |||||||||||||||| Sbjct: 359 ccttgagcttcatcgtcggggcccagccaagcttctccttgataagggtgttgtcagagt 418 Query: 409 tgcggccgcggacaccctctggaccagggatgtggtggatgg 450 |||| |||||||| || || || ||||||||||||||||||| Sbjct: 419 tgcgcccgcggaccccttccgggccagggatgtggtggatgg 460
>gb|BT013590.1| Lycopersicon esculentum clone 132353F, mRNA sequence Length = 1880 Score = 129 bits (65), Expect = 1e-26 Identities = 137/161 (85%) Strand = Plus / Minus Query: 369 gcccagccaagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctct 428 |||||||||||||| ||||||||||| |||||||||||||| || || || ||||||||| Sbjct: 1145 gcccagccaagcttttccttgatgagagtgttgtcagagtttcgaccacgcacaccctct 1086 Query: 429 ggaccagggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagcc 488 || || || ||||| ||||| || || |||||| | || |||| ||| || ||||| ||| Sbjct: 1085 ggtcctggaatgtgatggatcggaaggttcttgccatcaaagctgaggactatctctgcc 1026 Query: 489 atctcgttcatgctcaccatttcatcacttccaatgttcac 529 ||||| |||||||| ||||| ||||||||||| |||||||| Sbjct: 1025 atctcattcatgcttaccatctcatcacttccgatgttcac 985
>ref|NM_122767.2| Arabidopsis thaliana GDP-mannose 3,5-epimerase/ catalytic AT5G28840 mRNA, complete cds Length = 1611 Score = 119 bits (60), Expect = 1e-23 Identities = 189/232 (81%) Strand = Plus / Minus Query: 298 tctccttctcgatctgctccttgatccagaagtaggtgaaccttaggccatccttgagct 357 |||| ||||||||||| ||||| |||||||||||||| | || || || ||||| | Sbjct: 1208 tctctttctcgatctgttcctttatccagaagtaggttattctaagcccctccttcaatc 1149 Query: 358 tcattgtgggggcccagccaagcttctccttgatgagggtgttgtcagagttgcggccgc 417 |||| | || ||||| |||||||| || ||||| || ||||||| ||||| || || | Sbjct: 1148 tcatattaggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccac 1089 Query: 418 ggacaccctctggaccagggatgtggtggatgggtagcttcttgtcctcgaagccgagaa 477 | ||||| || || ||||| |||||||| || || |||||||| ||||| |||| ||||| Sbjct: 1088 gaacaccttccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaa 1029 Query: 478 caatctcagccatctcgttcatgctcaccatttcatcacttccaatgttcac 529 | |||||||||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 1028 ccatctcagccatctcattcatgctcaccatctcatcgcttccgatgttcac 977 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 207 tcagccgcgcggagggagcccagctgcaccggtgc 241 |||||||||||||| ||||| ||||| |||||||| Sbjct: 1299 tcagccgcgcggagtgagcctagctgaaccggtgc 1265
>gb|AY116953.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1134 Score = 119 bits (60), Expect = 1e-23 Identities = 189/232 (81%) Strand = Plus / Minus Query: 298 tctccttctcgatctgctccttgatccagaagtaggtgaaccttaggccatccttgagct 357 |||| ||||||||||| ||||| |||||||||||||| | || || || ||||| | Sbjct: 1030 tctctttctcgatctgttcctttatccagaagtaggttattctaagcccctccttcaatc 971 Query: 358 tcattgtgggggcccagccaagcttctccttgatgagggtgttgtcagagttgcggccgc 417 |||| | || ||||| |||||||| || ||||| || ||||||| ||||| || || | Sbjct: 970 tcatattaggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccac 911 Query: 418 ggacaccctctggaccagggatgtggtggatgggtagcttcttgtcctcgaagccgagaa 477 | ||||| || || ||||| |||||||| || || |||||||| ||||| |||| ||||| Sbjct: 910 gaacaccttccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaa 851 Query: 478 caatctcagccatctcgttcatgctcaccatttcatcacttccaatgttcac 529 | |||||||||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 850 ccatctcagccatctcattcatgctcaccatctcatcgcttccgatgttcac 799 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 207 tcagccgcgcggagggagcccagctgcaccggtgc 241 |||||||||||||| ||||| ||||| |||||||| Sbjct: 1121 tcagccgcgcggagtgagcctagctgaaccggtgc 1087
>gb|AY057694.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1404 Score = 119 bits (60), Expect = 1e-23 Identities = 189/232 (81%) Strand = Plus / Minus Query: 298 tctccttctcgatctgctccttgatccagaagtaggtgaaccttaggccatccttgagct 357 |||| ||||||||||| ||||| |||||||||||||| | || || || ||||| | Sbjct: 1093 tctctttctcgatctgttcctttatccagaagtaggttattctaagcccctccttcaatc 1034 Query: 358 tcattgtgggggcccagccaagcttctccttgatgagggtgttgtcagagttgcggccgc 417 |||| | || ||||| |||||||| || ||||| || ||||||| ||||| || || | Sbjct: 1033 tcatattaggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccac 974 Query: 418 ggacaccctctggaccagggatgtggtggatgggtagcttcttgtcctcgaagccgagaa 477 | ||||| || || ||||| |||||||| || || |||||||| ||||| |||| ||||| Sbjct: 973 gaacaccttccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaa 914 Query: 478 caatctcagccatctcgttcatgctcaccatttcatcacttccaatgttcac 529 | |||||||||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 913 ccatctcagccatctcattcatgctcaccatctcatcgcttccgatgttcac 862 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 207 tcagccgcgcggagggagcccagctgcaccggtgc 241 |||||||||||||| ||||| ||||| |||||||| Sbjct: 1184 tcagccgcgcggagtgagcctagctgaaccggtgc 1150
>gb|AY057660.1| Arabidopsis thaliana AT5g28840/F7P1_20 mRNA, complete cds Length = 1452 Score = 119 bits (60), Expect = 1e-23 Identities = 189/232 (81%) Strand = Plus / Minus Query: 298 tctccttctcgatctgctccttgatccagaagtaggtgaaccttaggccatccttgagct 357 |||| ||||||||||| ||||| |||||||||||||| | || || || ||||| | Sbjct: 1093 tctctttctcgatctgttcctttatccagaagtaggttattctaagcccctccttcaatc 1034 Query: 358 tcattgtgggggcccagccaagcttctccttgatgagggtgttgtcagagttgcggccgc 417 |||| | || ||||| |||||||| || ||||| || ||||||| ||||| || || | Sbjct: 1033 tcatattaggagcccaaccaagcttttctttgatcagattgttgtctgagttacgaccac 974 Query: 418 ggacaccctctggaccagggatgtggtggatgggtagcttcttgtcctcgaagccgagaa 477 | ||||| || || ||||| |||||||| || || |||||||| ||||| |||| ||||| Sbjct: 973 gaacaccttccgggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaa 914 Query: 478 caatctcagccatctcgttcatgctcaccatttcatcacttccaatgttcac 529 | |||||||||||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 913 ccatctcagccatctcattcatgctcaccatctcatcgcttccgatgttcac 862 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Minus Query: 207 tcagccgcgcggagggagcccagctgcaccggtgc 241 |||||||||||||| ||||| ||||| |||||||| Sbjct: 1184 tcagccgcgcggagtgagcctagctgaaccggtgc 1150
>gb|AF272706.1|F7P1 Arabidopsis thaliana BAC F7P1 Length = 110714 Score = 113 bits (57), Expect = 6e-22 Identities = 135/161 (83%) Strand = Plus / Plus Query: 369 gcccagccaagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctct 428 ||||| |||||||| || ||||| || ||||||| ||||| || || || ||||| || Sbjct: 18925 gcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacaccttcc 18984 Query: 429 ggaccagggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagcc 488 || ||||| |||||||| || || |||||||| ||||| |||| |||||| ||||||||| Sbjct: 18985 gggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctcagcc 19044 Query: 489 atctcgttcatgctcaccatttcatcacttccaatgttcac 529 ||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 19045 atctcattcatgctcaccatctcatcgcttccgatgttcac 19085 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 298 tctccttctcgatctgctccttgatccagaagtaggt 334 |||| ||||||||||| ||||| |||||||||||||| Sbjct: 18762 tctctttctcgatctgttcctttatccagaagtaggt 18798 Score = 46.1 bits (23), Expect = 0.12 Identities = 32/35 (91%) Strand = Plus / Plus Query: 207 tcagccgcgcggagggagcccagctgcaccggtgc 241 |||||||||||||| ||||| ||||| |||||||| Sbjct: 18671 tcagccgcgcggagtgagcctagctgaaccggtgc 18705
>dbj|AK118786.1| Arabidopsis thaliana mRNA, clone: RAFL21-11-O14 Length = 550 Score = 113 bits (57), Expect = 6e-22 Identities = 135/161 (83%) Strand = Plus / Plus Query: 369 gcccagccaagcttctccttgatgagggtgttgtcagagttgcggccgcggacaccctct 428 ||||| |||||||| || ||||| || ||||||| ||||| || || || ||||| || Sbjct: 10 gcccaaccaagcttttctttgatcagattgttgtctgagttacgaccacgaacaccttcc 69 Query: 429 ggaccagggatgtggtggatgggtagcttcttgtcctcgaagccgagaacaatctcagcc 488 || ||||| |||||||| || || |||||||| ||||| |||| |||||| ||||||||| Sbjct: 70 gggccaggaatgtggtgaattggaagcttcttttcctcaaagctgagaaccatctcagcc 129 Query: 489 atctcgttcatgctcaccatttcatcacttccaatgttcac 529 ||||| |||||||||||||| ||||| ||||| |||||||| Sbjct: 130 atctcattcatgctcaccatctcatcgcttccgatgttcac 170
>ref|XM_848981.1| PREDICTED: Canis familiaris similar to NACHT, LRR and PYD containing protein 10 (LOC611323), mRNA Length = 2061 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Minus Query: 301 ccttctcgatctgctccttgatccag 326 ||||||| |||||||||||||||||| Sbjct: 1108 ccttctccatctgctccttgatccag 1083
>gb|AC125456.4| Mus musculus BAC clone RP24-193M20 from chromosome 18, complete sequence Length = 142347 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 381 ttctccttgatgagggtgttgt 402 |||||||||||||||||||||| Sbjct: 51864 ttctccttgatgagggtgttgt 51885
>gb|AC010708.10|AC010708 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR10E05, complete sequence Length = 188766 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 298 tctccttctcgatctgctccttgatc 323 ||||||||||||||| |||||||||| Sbjct: 176972 tctccttctcgatctcctccttgatc 176997
>gb|AC012098.9|AC012098 Drosophila melanogaster, chromosome X, region 17A-17B, BAC clone BACR03K10, complete sequence Length = 188489 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 298 tctccttctcgatctgctccttgatc 323 ||||||||||||||| |||||||||| Sbjct: 92349 tctccttctcgatctcctccttgatc 92374
>gb|AE003509.5| Drosophila melanogaster chromosome X, section 61 of 74 of the complete sequence Length = 315109 Score = 44.1 bits (22), Expect = 0.46 Identities = 25/26 (96%) Strand = Plus / Plus Query: 298 tctccttctcgatctgctccttgatc 323 ||||||||||||||| |||||||||| Sbjct: 16361 tctccttctcgatctcctccttgatc 16386
>gb|AC018489.7| Drosophila melanogaster clone BACR19G19, complete sequence Length = 179077 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 tctccttctcgatctgctcct 318 ||||||||||||||||||||| Sbjct: 170228 tctccttctcgatctgctcct 170208
>gb|AC022349.3| Drosophila melanogaster clone BACR33D04, complete sequence Length = 177576 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 tctccttctcgatctgctcct 318 ||||||||||||||||||||| Sbjct: 96592 tctccttctcgatctgctcct 96572
>gb|AY121637.1| Drosophila melanogaster HL04344 full insert cDNA Length = 1953 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 tctccttctcgatctgctcct 318 ||||||||||||||||||||| Sbjct: 483 tctccttctcgatctgctcct 463
>ref|NM_206767.1| Drosophila melanogaster CG9132-PB, isoform B (CG9132) mRNA, complete cds Length = 1934 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 tctccttctcgatctgctcct 318 ||||||||||||||||||||| Sbjct: 482 tctccttctcgatctgctcct 462
>ref|NM_206768.1| Drosophila melanogaster CG9132-PA, isoform A (CG9132) mRNA, complete cds Length = 1837 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 298 tctccttctcgatctgctcct 318 ||||||||||||||||||||| Sbjct: 385 tctccttctcgatctgctcct 365
>dbj|AB235855.1| Oryza sativa (japonica cultivar-group) OsGME mRNA for GDP-mannose-3'',5''-epimerase, complete cds Length = 1053 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 486 gccatctcgttcatgctcaccatttcatcacttccaatgtt 526 ||||| ||||||||||||||||| || || || |||||||| Sbjct: 782 gccatgtcgttcatgctcaccatctcctcgctgccaatgtt 742
>dbj|AK109046.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-D11, full insert sequence Length = 1134 Score = 42.1 bits (21), Expect = 1.8 Identities = 36/41 (87%) Strand = Plus / Minus Query: 486 gccatctcgttcatgctcaccatttcatcacttccaatgtt 526 ||||| ||||||||||||||||| || || || |||||||| Sbjct: 802 gccatgtcgttcatgctcaccatctcctcgctgccaatgtt 762
>gb|AE003503.4| Drosophila melanogaster chromosome X, section 55 of 74 of the complete sequence Length = 300468 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 298 tctccttctcgatctgctcct 318 ||||||||||||||||||||| Sbjct: 161797 tctccttctcgatctgctcct 161817
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 tccttgccgtcagccgcgcg 217 |||||||||||||||||||| Sbjct: 2074200 tccttgccgtcagccgcgcg 2074181
>gb|AC150687.3| Bos taurus BAC CH240-243M2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 144223 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 237 ggtgcctgtgtggacaccac 256 |||||||||||||||||||| Sbjct: 63885 ggtgcctgtgtggacaccac 63866
>ref|XM_368123.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG01121.4) partial mRNA Length = 879 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 ctcgatctgctccttgatcc 324 |||||||||||||||||||| Sbjct: 855 ctcgatctgctccttgatcc 836
>gb|AC091324.10| Mus musculus chromosome 7, clone RP23-7G1, complete sequence Length = 225556 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 agggcaggctgtgcaattct 111 |||||||||||||||||||| Sbjct: 76656 agggcaggctgtgcaattct 76637
>emb|AL591783.1|SME591783 Sinorhizobium meliloti 1021 complete chromosome; segment 2/12 Length = 306650 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 ctcgatctgctccttgatcc 324 |||||||||||||||||||| Sbjct: 44978 ctcgatctgctccttgatcc 44997
>gb|AC134698.10| Homo sapiens chromosome 8, clone RP11-359P18, complete sequence Length = 173305 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 ccagggatgtggtggatggg 451 |||||||||||||||||||| Sbjct: 131613 ccagggatgtggtggatggg 131632
>gb|AC104119.2| Homo sapiens chromosome 5 clone RP11-34D23, complete sequence Length = 168108 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 298 tctccttctcgatctgctcc 317 |||||||||||||||||||| Sbjct: 92147 tctccttctcgatctgctcc 92166
>gb|AE009631.1| Brucella melitensis 16M chromosome I, section 188 of 195 of the complete sequence Length = 14375 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 198 tccttgccgtcagccgcgcg 217 |||||||||||||||||||| Sbjct: 2431 tccttgccgtcagccgcgcg 2450
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 tccttgccgtcagccgcgcg 217 |||||||||||||||||||| Sbjct: 2090669 tccttgccgtcagccgcgcg 2090650
>gb|AC150680.7| Monodelphis domestica, clone XX-28D5, complete sequence Length = 154058 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 gcctgtgtggacaccacctt 259 |||||||||||||||||||| Sbjct: 141342 gcctgtgtggacaccacctt 141361
>gb|AE015924.1| Porphyromonas gingivalis W83, complete genome Length = 2343476 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 258 ttggatgatccgtaccgggc 277 |||||||||||||||||||| Sbjct: 1701234 ttggatgatccgtaccgggc 1701215
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 tctcgatctgctccttgatc 323 |||||||||||||||||||| Sbjct: 3780769 tctcgatctgctccttgatc 3780788
>dbj|AK113577.1| Ciona intestinalis cDNA, clone:ciad076a06, full insert sequence Length = 1443 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cgatctgctccttgatccag 326 |||||||||||||||||||| Sbjct: 798 cgatctgctccttgatccag 817
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 tccttgccgtcagccgcgcg 217 |||||||||||||||||||| Sbjct: 2087788 tccttgccgtcagccgcgcg 2087769
>gb|DQ079316.1| Drosophila mulleri strain 15081-1371.00 Tes33 (Tes33) gene, partial cds Length = 524 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 411 ttctcgatctgctccttgat 392
>gb|DQ079315.1| Drosophila mojavensis strain 15081-1352.02 Tes33 (Tes33) gene, partial cds Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 423 ttctcgatctgctccttgat 404
>gb|DQ079314.1| Drosophila mojavensis strain 15081-1352.01 Tes33 (Tes33) gene, partial cds Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 423 ttctcgatctgctccttgat 404
>gb|DQ079313.1| Drosophila mojavensis strain 15081-1352.00 Tes33 (Tes33) gene, partial cds Length = 524 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 411 ttctcgatctgctccttgat 392
>gb|DQ079312.1| Drosophila mojavensis strain 15081-1351.09 Tes33 (Tes33) gene, partial cds Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 423 ttctcgatctgctccttgat 404
>gb|DQ079311.1| Drosophila mojavensis strain 15081-1351.03 Tes33 (Tes33) gene, partial cds Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 423 ttctcgatctgctccttgat 404
>gb|DQ079310.1| Drosophila mojavensis strain 15081-1351.14 Tes33 (Tes33) gene, partial cds Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 423 ttctcgatctgctccttgat 404
>gb|DQ079309.1| Drosophila mojavensis strain 15081-1351.12 Tes33 (Tes33) gene, partial cds Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 423 ttctcgatctgctccttgat 404
>gb|DQ079307.1| Drosophila arizonae strain 15081-1271.13 Tes33 (Tes33) gene, partial cds Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 423 ttctcgatctgctccttgat 404
>gb|DQ079306.1| Drosophila arizonae strain 15081-1271.12 Tes33 (Tes33) gene, partial cds Length = 536 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 423 ttctcgatctgctccttgat 404
>gb|DQ079305.1| Drosophila arizonae strain 15081-1271.08 Tes33 (Tes33) gene, partial cds Length = 524 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 411 ttctcgatctgctccttgat 392
>gb|DQ079304.1| Drosophila arizonae strain 15081-1271.05 Tes33 (Tes33) gene, partial cds Length = 524 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 411 ttctcgatctgctccttgat 392
>gb|DQ079303.1| Drosophila arizonae strain 15081-1271.04 Tes33 (Tes33) gene, partial cds Length = 524 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 411 ttctcgatctgctccttgat 392
>gb|DQ079302.1| Drosophila arizonae strain 15081-1271.00 Tes33 (Tes33) gene, partial cds Length = 524 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 303 ttctcgatctgctccttgat 322 |||||||||||||||||||| Sbjct: 411 ttctcgatctgctccttgat 392
>gb|L37524.1|ASNMETA Aspergillus flavus (isolate 28) metalloproteinase gene, complete cds Length = 1508 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 ccttgatgagggtgttgtca 404 |||||||||||||||||||| Sbjct: 302 ccttgatgagggtgttgtca 283 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,244,625 Number of Sequences: 3902068 Number of extensions: 4244625 Number of successful extensions: 81702 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 68 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 81409 Number of HSP's gapped (non-prelim): 289 length of query: 529 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 506 effective length of database: 17,143,297,704 effective search space: 8674508638224 effective search space used: 8674508638224 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)