>ADDA_MOUSE (Q9QYC0) Alpha-adducin (Erythrocyte adducin alpha subunit)|
          Length = 735

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +1

Query: 400 PSVSGAAHTWPRPTKPPAHIRQQHRTAPSP 489
           P+V   AH  P PT+PPA    +  +AP+P
Sbjct: 656 PAVEEEAHASPDPTQPPAEADPEPASAPTP 685

>DNM3A_HUMAN (Q9Y6K1) DNA (cytosine-5)-methyltransferase 3A (EC 2.1.1.37)|
           (Dnmt3a) (DNA methyltransferase HsaIIIA) (DNA MTase
           HsaIIIA) (M.HsaIIIA)
          Length = 909

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -2

Query: 473 RCCCLMCAGGLVGRGQV*AAPETDGWMMYAC 381
           RC C+ C   LVG G   AA + D W  Y C
Sbjct: 553 RCFCVECVDLLVGPGAAQAAIKEDPWNCYMC 583

>DNM3A_MOUSE (O88508) DNA (cytosine-5)-methyltransferase 3A (EC 2.1.1.37)|
           (Dnmt3a) (DNA methyltransferase MmuIIIA) (DNA MTase
           MmuIIIA) (M.MmuIIIA)
          Length = 908

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = -2

Query: 473 RCCCLMCAGGLVGRGQV*AAPETDGWMMYAC 381
           RC C+ C   LVG G   AA + D W  Y C
Sbjct: 552 RCFCVECVDLLVGPGAAQAAIKEDPWNCYMC 582

>UBP6_HUMAN (P35125) Ubiquitin carboxyl-terminal hydrolase 6 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 6) (Ubiquitin-specific-processing
            protease 6) (Deubiquitinating enzyme 6) (Proto-oncogene
            TRE-2)
          Length = 1406

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +3

Query: 213  VSKEGGVCFWCPKTSLCQPCFIIIAPDK 296
            V K+G  C WCP+   C+ C I    D+
Sbjct: 958  VQKDGNSCAWCPQYRFCRGCKIDCGEDR 985

>TARA_HUMAN (Q9H2D6) TRIO and F-actin-binding protein (Protein Tara)|
            (Trio-associated repeat on actin)
          Length = 2365

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 394  IHPSVSGAAHTWPRPTKPPAHIRQQHRTAP 483
            ++P+  GA  T P P++PP  +   HR AP
Sbjct: 995  VYPAAYGAPLTSPEPSQPPCAVCIGHRDAP 1024

>SEPP1_BOVIN (P49907) Selenoprotein P-like protein precursor|
          Length = 402

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -2

Query: 497 LWRGLGAVRCCCLMCAGGLVGRGQ 426
           +WRGLG     CL+  GG   +GQ
Sbjct: 1   MWRGLGLALALCLLLTGGTESQGQ 24

>UBP32_HUMAN (Q8NFA0) Ubiquitin carboxyl-terminal hydrolase 32 (EC 3.1.2.15)|
            (Ubiquitin thioesterase 32)
            (Ubiquitin-specific-processing protease 32)
            (Deubiquitinating enzyme 32) (NY-REN-60 antigen)
          Length = 1604

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 213  VSKEGGVCFWCPKTSLCQPCFIIIAPDK 296
            V K+G  C WCP    C+ C I    D+
Sbjct: 1160 VQKDGNSCAWCPWYRFCRGCKIDCGEDR 1187

>RMS5_EMENI (P02382) Mitochondrial ribosomal protein S5|
          Length = 410

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 392 SSIHQSQELLIPGLDRPNLQHTSDNNTGRLPAHATTG 502
           SSI      LI G D+PNLQ+T  N+  R+ +    G
Sbjct: 369 SSIQGYPSSLIRGNDKPNLQYTKLNSKSRIGSFGVKG 405

>J1L_HCMVA (P17143) Hypothetical protein J1L|
          Length = 309

 Score = 28.9 bits (63), Expect = 8.5
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 415 AAHTWPRPTKPPAHIRQQHRTAP---SPRHNRIP 507
           AA T P P +PP+      RT P   +PRH R P
Sbjct: 23  AARTAPAPAQPPSPAPTPSRTPPVSATPRHRRRP 56


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,806,510
Number of Sequences: 219361
Number of extensions: 1559258
Number of successful extensions: 3796
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3793
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3754426130
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)