ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart31f12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BIOH_CHRVO (Q7NPW5) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s... 37 0.032
2MPA51_PHAAQ (P56164) Major pollen allergen Pha a 5.1 precursor (... 34 0.21
3ACDA2_METKA (Q8TXF5) Putative acetyl-CoA decarbonylase/synthase ... 33 0.35
4PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B me... 33 0.60
5GLIS3_MOUSE (Q6XP49) Zinc finger protein GLIS3 (GLI-similar 3) 32 0.79
6HMCN1_HUMAN (Q96RW7) Hemicentin-1 precursor (Fibulin-6) (FIBL-6) 32 0.79
7PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B me... 32 1.3
8MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor (... 32 1.3
9RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subun... 31 1.8
10XYLF_PSEPU (P23106) 2-hydroxymuconic semialdehyde hydrolase (EC ... 31 2.3
11RP54_RHISN (P22881) RNA polymerase sigma-54 factor 31 2.3
12CJ095_HUMAN (Q9H7T3) Protein C10orf95 31 2.3
13COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor 30 3.0
14POL_SIVMK (P05897) Pol polyprotein [Contains: Protease (Retropep... 30 3.0
15GCSH_TROWT (P64215) Glycine cleavage system H protein 30 3.9
16GCSH_TROW8 (P64216) Glycine cleavage system H protein 30 3.9
17DISS_TRIJE (Q7ZZM2) Disintegrin jerdostatin precursor 30 3.9
18SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1... 30 3.9
19GCSH_STRAW (Q82JI1) Glycine cleavage system H protein 30 3.9
20BIOH_AZOSE (Q5NZF6) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s... 30 3.9
21LRC25_MOUSE (Q8K1T1) Leucine-rich repeat-containing protein 25 p... 30 3.9
22GCSH_CAUCR (Q9A352) Glycine cleavage system H protein 30 5.1
23BIOH_NITEU (Q82SL8) Carboxylesterase bioH (EC 3.1.1.1) (Biotin s... 30 5.1
24TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chlo... 30 5.1
25LYPD5_MOUSE (Q9D7Z7) Ly6/PLAUR domain-containing protein 5 precu... 30 5.1
26TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chlo... 30 5.1
27PIP_MYCPN (P75092) Putative proline iminopeptidase (EC 3.4.11.5)... 30 5.1
28TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chl... 29 6.7
29DHYS_AERPE (Q9YE72) Probable deoxyhypusine synthase (EC 2.5.1.46... 29 6.7
30YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon ... 29 6.7
31PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9 29 6.7
32WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-W... 29 6.7
33WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP) 29 6.7
34WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-W... 29 6.7
35TOR2X_HUMAN (Q8N2E6) Prosalusin precursor (Torsin-2A) (Torsin fa... 29 8.7
36CR1KA_BACTM (Q45715) Pesticidal crystal protein cry1Ka (Insectic... 29 8.7
37TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chlo... 29 8.7
38LRP1_CHICK (P98157) Low-density lipoprotein receptor-related pro... 29 8.7

>BIOH_CHRVO (Q7NPW5) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 254

 Score = 37.0 bits (84), Expect = 0.032
 Identities = 15/35 (42%), Positives = 22/35 (62%)
 Frame = -1

Query: 427 LWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 323
           L++GA D I P+G  R++A+ LP    +E P A H
Sbjct: 198 LFYGARDAITPIGAGRWLAESLPDAVLYEFPQASH 232



to top

>MPA51_PHAAQ (P56164) Major pollen allergen Pha a 5.1 precursor (Pha A 5) (Clone|
           28)
          Length = 320

 Score = 34.3 bits (77), Expect = 0.21
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = -3

Query: 440 GGCAPMAWRGGPHRAR 393
           GGC P+ WRGG HRAR
Sbjct: 300 GGCQPVVWRGGSHRAR 315



to top

>ACDA2_METKA (Q8TXF5) Putative acetyl-CoA decarbonylase/synthase complex alpha|
           subunit-like
          Length = 632

 Score = 33.5 bits (75), Expect = 0.35
 Identities = 23/58 (39%), Positives = 25/58 (43%), Gaps = 6/58 (10%)
 Frame = +1

Query: 358 MAASARCTVRGQRAR*GPPRHAIGAHPPHR------RGTGSPSPAGSNPTFRTRRSCP 513
           +AA A   V G R R  PPR A    PP R      R  G P  AG+ P      SCP
Sbjct: 323 IAAWAALRVEGSRDRREPPRRAFRVGPPTRLTDVVIRNVGVPVVAGNIPGIVVLVSCP 380



to top

>PHLB1_MOUSE (Q6PDH0) Pleckstrin homology-like domain family B member 1 (Protein|
           LL5-alpha)
          Length = 1371

 Score = 32.7 bits (73), Expect = 0.60
 Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = +1

Query: 328 RPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRG--TGSPSPAGS 480
           R WAAHGT+P   S     RG+R R   P   +G     R+G  +G  SPA S
Sbjct: 495 RRWAAHGTSPEDFSLTLGARGRRTR--SPSPTLGESLAPRKGSFSGRLSPAYS 545



to top

>GLIS3_MOUSE (Q6XP49) Zinc finger protein GLIS3 (GLI-similar 3)|
          Length = 780

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = +1

Query: 292 HPPCHRPW-GRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSP- 465
           H   H P  G G  P A   +AP+ AS   T  G  A  GPP H +    P     GSP 
Sbjct: 539 HTVGHSPGPGPGPGPGAELYSAPIFASNHSTRSGTAAGAGPPPHPVSHPSPGHNVQGSPH 598

Query: 466 SPAGSNP 486
           +P+   P
Sbjct: 599 NPSSQLP 605



to top

>HMCN1_HUMAN (Q96RW7) Hemicentin-1 precursor (Fibulin-6) (FIBL-6)|
          Length = 5635

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 9/65 (13%)
 Frame = -2

Query: 432  CTYGMARRTSSC--PLASHGTSRRGCHG-------CSTMSCPRPGTSSPWPMAWGMSSSG 280
            C  G  +RT  C  P+  +G   R C G       C++  CP  G  SPW   WG  S  
Sbjct: 4716 CGGGARQRTRGCSDPVPQYGG--RKCEGSDVQSDFCNSDPCPTHGNWSPW-SGWGTCS-- 4770

Query: 279  RCCSG 265
            R C+G
Sbjct: 4771 RTCNG 4775



to top

>PHLB1_HUMAN (Q86UU1) Pleckstrin homology-like domain family B member 1 (Protein|
           LL5-alpha)
          Length = 1377

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 25/78 (32%), Positives = 30/78 (38%), Gaps = 4/78 (5%)
 Frame = +1

Query: 295 PPCHRPWGRGARP--WAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPS 468
           P  +R      RP  WAAHG +P   S     RG+R R   P       P     +G  S
Sbjct: 480 PKLNREVAESPRPRRWAAHGASPEDFSLTLGARGRRTRSPSPTLGESLAPHKGSFSGRLS 539

Query: 469 PAGSNPTFRTRRSC--PC 516
           PA S  +      C  PC
Sbjct: 540 PAYSLGSLTGASPCQSPC 557



to top

>MUCDL_HUMAN (Q9HBB8) Mucin and cadherin-like protein precursor|
           (Mu-protocadherin)
          Length = 845

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 5/47 (10%)
 Frame = -2

Query: 408 TSSCPLASHGTSRRGCH-----GCSTMSCPRPGTSSPWPMAWGMSSS 283
           TSS P  S G      H     G  T   P+PGTS P P   G S+S
Sbjct: 514 TSSTPGGSPGAENSTSHQPATPGGDTAQTPKPGTSQPMPPGVGTSTS 560



to top

>RPB1_ENCCU (Q8SSC4) DNA-directed RNA polymerase II largest subunit (EC|
           2.7.7.6) (RNA polymerase II subunit 1)
          Length = 1599

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -2

Query: 363 CHGCSTMSCPRPGTSSPWPMAWGMSSSGRCCSGK 262
           C  CS +  PR G  S     WGMS     C G+
Sbjct: 101 CFYCSKIKIPRKGIKSTLSNVWGMSKGRSVCEGE 134



to top

>XYLF_PSEPU (P23106) 2-hydroxymuconic semialdehyde hydrolase (EC 3.1.1.-)|
           (HMSH)
          Length = 281

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 421 HGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 323
           HG ED I+P+  S  +AQ +P  Q H     GH
Sbjct: 223 HGREDRIIPLQASLTLAQWIPNAQLHVFGQCGH 255



to top

>RP54_RHISN (P22881) RNA polymerase sigma-54 factor|
          Length = 525

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = +2

Query: 170 KKLKHRSTKNSSTQKTGKHQTTSL*LTLASFFPEQHRPEDDIPHAIGHGEEVPGRG 337
           + + H    +S+T   G+   + L    A+ F +   P+ D P  +G  + +PG G
Sbjct: 79  ESVDHGDLYDSATTSPGERLRSELDADFANVFQDDTAPQRDAPELLGQWKSMPGAG 134



to top

>CJ095_HUMAN (Q9H7T3) Protein C10orf95|
          Length = 257

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 22/68 (32%), Positives = 26/68 (38%)
 Frame = -2

Query: 456 RSPAMRRMCTYGMARRTSSCPLASHGTSRRGCHGCSTMSCPRPGTSSPWPMAWGMSSSGR 277
           R+ A +  C  G A      PL S+ TS  G  G  T   P P  +SP   A       R
Sbjct: 160 RAGACKPSCA-GAAWSARGAPLCSYRTSCAGSCGARTAPTPAPTCASPSAAASSCCRRRR 218

Query: 276 CCSGKNEA 253
            CS    A
Sbjct: 219 ACSSPTTA 226



to top

>COGA1_HUMAN (Q07092) Collagen alpha-1(XVI) chain precursor|
          Length = 1603

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 20/62 (32%), Positives = 22/62 (35%)
 Frame = +1

Query: 292  HPPCHRPWGRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSP 471
            HP    P G   +P     T    A       G + R GPP H     PP     G P P
Sbjct: 1249 HPGLPGPKGDCGKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPGPP-----GQPGP 1303

Query: 472  AG 477
            AG
Sbjct: 1304 AG 1305



to top

>POL_SIVMK (P05897) Pol polyprotein [Contains: Protease (Retropepsin) (EC|
           3.4.23.-); Reverse transcriptase/ribonuclease H (EC
           2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)]
          Length = 1054

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
 Frame = +1

Query: 307 RPWGRGAR-PWAAHGTAPMAASARCTVRGQRAR*GPPRHAIG 429
           RPW  G   P   HG++   A A C+ RG         HA+G
Sbjct: 44  RPWSMGKEAPQFPHGSSASGADANCSPRGPSCGSAKELHAVG 85



to top

>GCSH_TROWT (P64215) Glycine cleavage system H protein|
          Length = 121

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = -1

Query: 445 DEADV-----HLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 290
           DE+D+     H W   +D I  VG+++Y  ++L  + Y +LP+   L    + +G++
Sbjct: 3   DESDLVYSKEHEWVFIDDDIAWVGITKYAVKKLGDIVYIDLPSQDALIVQGECVGEI 59



to top

>GCSH_TROW8 (P64216) Glycine cleavage system H protein|
          Length = 121

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
 Frame = -1

Query: 445 DEADV-----HLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 290
           DE+D+     H W   +D I  VG+++Y  ++L  + Y +LP+   L    + +G++
Sbjct: 3   DESDLVYSKEHEWVFIDDDIAWVGITKYAVKKLGDIVYIDLPSQDALIVQGECVGEI 59



to top

>DISS_TRIJE (Q7ZZM2) Disintegrin jerdostatin precursor|
          Length = 110

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 7/43 (16%)
 Frame = +3

Query: 351 CTHGSLCAMYRERPTGT--MRSSAPCHRCTSASS-----PGNG 458
           CT G  C   + +P GT   R+S   H CT  S      PGNG
Sbjct: 68  CTTGPCCRQCKLKPAGTTCWRTSVSSHYCTGRSCECPSYPGNG 110



to top

>SRRM1_MOUSE (Q52KI8) Serine/arginine repetitive matrix protein 1|
           (Plenty-of-prolines 101)
          Length = 946

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 15/33 (45%), Positives = 18/33 (54%)
 Frame = +1

Query: 409 PPRHAIGAHPPHRRGTGSPSPAGSNPTFRTRRS 507
           P R A  + PP RR + SP P   +PT   RRS
Sbjct: 640 PKRRASPSPPPKRRVSHSPPPKQRSPTVTKRRS 672



to top

>GCSH_STRAW (Q82JI1) Glycine cleavage system H protein|
          Length = 125

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = -1

Query: 466 MENPFPGDEADVHLW-HGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 290
           M NP     +  H W  GAED +  VG++ + A  L  V Y +LP  G      +  G++
Sbjct: 1   MSNPQQLRYSKEHEWLSGAEDGVSTVGITEHAANALGDVVYVQLPEVGDTVTAGETCGEL 60



to top

>BIOH_AZOSE (Q5NZF6) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 250

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 433 VHLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 323
           V L HGA D ++P+  + ++A RLP  +       GH
Sbjct: 194 VQLIHGAGDALMPLAAAEWLATRLPDARLARFDDCGH 230



to top

>LRC25_MOUSE (Q8K1T1) Leucine-rich repeat-containing protein 25 precursor|
           (Monocyte and plasmacytoid-activated protein)
          Length = 297

 Score = 30.0 bits (66), Expect = 3.9
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 10/63 (15%)
 Frame = -2

Query: 402 SCPLASHGTSRRGCHGCSTMSCPRPGTSSP----------WPMAWGMSSSGRCCSGKNEA 253
           SC LAS    R+ C G   + C  P T +P           P +WG  + G   +G    
Sbjct: 121 SCGLASWYALRQNCSGQQQLLCLHPATEAPRNLSTFLQVSCPPSWGPGTIGALVAGTISL 180

Query: 252 SVS 244
           +V+
Sbjct: 181 AVA 183



to top

>GCSH_CAUCR (Q9A352) Glycine cleavage system H protein|
          Length = 121

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/47 (31%), Positives = 24/47 (51%)
 Frame = -1

Query: 430 HLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGHLFPMADGMGDV 290
           H W   E  +  VG++ Y A++L  V + E P AG +    +G+  V
Sbjct: 7   HEWVIVEGDVATVGITAYAAEQLGDVVFVETPEAGKVVKQGEGLAVV 53



to top

>BIOH_NITEU (Q82SL8) Carboxylesterase bioH (EC 3.1.1.1) (Biotin synthesis|
           protein bioH)
          Length = 252

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -1

Query: 433 VHLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 323
           V L HG  D+I P G + ++ Q LP  +    P  GH
Sbjct: 199 VLLIHGRNDVITPAGAADWMQQHLPRARLVLFPHCGH 235



to top

>TPT_SPIOL (P11869) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (p36) (E29)
          Length = 404

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 7/59 (11%)
 Frame = -1

Query: 421 HGAEDLIVPVGLSRYIAQRLPWV-----QYHELP--TAGHLFPMADGMGDVILRTMLLG 266
           HG  D I  VGL+++I+  L WV      Y++L   T   + P+   +G+V+ R  ++G
Sbjct: 302 HGFNDAIAKVGLTKFISD-LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVIG 359



to top

>LYPD5_MOUSE (Q9D7Z7) Ly6/PLAUR domain-containing protein 5 precursor|
          Length = 256

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -2

Query: 354 CSTMSCPRPGTSSPWPMAWGMSSSGRCCSGK--NEASVS 244
           C   SC   GT+SPW     +   G CC G   N ASV+
Sbjct: 182 CHRPSCTTMGTTSPWT---SIDLQGYCCEGHLCNRASVT 217



to top

>TPT_FLAPR (P49131) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 408

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
 Frame = -1

Query: 427 LWHGAEDLIVPVGLSRYIAQRLPWVQ--YH-----ELPTAGHLFPMADGMGDVILRTMLL 269
           L HG  D I  VG++++I+  L WV   YH      + T   + P+   +G+V+ R  ++
Sbjct: 304 LKHGFSDAIAKVGMTKFISD-LFWVGMFYHLYNQLAINTLERVAPLTHAVGNVLKRVFVI 362

Query: 268 G 266
           G
Sbjct: 363 G 363



to top

>PIP_MYCPN (P75092) Putative proline iminopeptidase (EC 3.4.11.5) (PIP)|
           (Prolyl aminopeptidase) (PAP)
          Length = 309

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -1

Query: 466 MENPFPGDEADVHLWHGAEDLIVPVGLSRYIAQRLPWVQYHELPTAGH 323
           +EN     +  VHL HG  DL+ P+  +  + + LP +  +    AGH
Sbjct: 243 LENVAVLKDKPVHLIHGRFDLVCPLSQALELKRALPTLNLYVTNNAGH 290



to top

>TPT1_BRAOB (P52177) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT)
          Length = 407

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
 Frame = -1

Query: 427 LWHGAEDLIVPVGLSRYIAQRLPWV-----QYHELP--TAGHLFPMADGMGDVILRTMLL 269
           L HG  D I  VG++++I+  L WV      Y++L   T   + P+   +G+V+ R  ++
Sbjct: 303 LKHGFNDAIAKVGMTKFISD-LFWVGMFYHLYNQLATNTLERVAPLTHAVGNVLKRVFVI 361

Query: 268 G 266
           G
Sbjct: 362 G 362



to top

>DHYS_AERPE (Q9YE72) Probable deoxyhypusine synthase (EC 2.5.1.46) (DHS)|
          Length = 292

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
 Frame = -3

Query: 296 GCHPQDDVARGKMKRVLARVMLSG---AFLSSVCYCFLCSC 183
           G HP++ V+ GK+K    RV++ G     L  + YC L  C
Sbjct: 251 GAHPREAVSWGKIKESSRRVVVYGDATITLPVIAYCLLHGC 291



to top

>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 11/79 (13%)
 Frame = +1

Query: 295 PPCHRPWGRGARPWAAHGTAPMAASA--RCTVRGQRAR*GPPRHAI-GAHPPHRRGTGSP 465
           P    P    + P AA   AP A     R T    R    P R  I  A PP RR  G+P
Sbjct: 233 PAPRPPASSASSPQAAAPAAPSATRLPRRTTPSAPRPSSRPARPPIPAARPPPRRTPGTP 292

Query: 466 --------SPAGSNPTFRT 498
                   +PAG +P  RT
Sbjct: 293 RPAAARARAPAGCSPARRT 311



to top

>PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9|
          Length = 705

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 18/54 (33%), Positives = 20/54 (37%)
 Frame = +1

Query: 316 GRGARPWAAHGTAPMAASARCTVRGQRAR*GPPRHAIGAHPPHRRGTGSPSPAG 477
           GRG  P    G  P         +  R   GPP    G + P  RG G P P G
Sbjct: 336 GRGGFPGPGRGGGPP--------QNGRGGYGPPGRGRGGYGPPPRGYGGPGPRG 381



to top

>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 409 PPRHAIGAHPPHRRGTGSPSPAGS 480
           PP H+ G  PP  RG G+P P  S
Sbjct: 292 PPPHSSGPPPPPARGRGAPPPPPS 315



to top

>WASL_RAT (O08816) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 409 PPRHAIGAHPPHRRGTGSPSPAGS 480
           PP H+ G  PP  RG G+P P  S
Sbjct: 289 PPPHSSGPPPPPARGRGAPPPPPS 312



to top

>WASL_MOUSE (Q91YD9) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 501

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +1

Query: 409 PPRHAIGAHPPHRRGTGSPSPAGS 480
           PP H+ G  PP  RG G+P P  S
Sbjct: 289 PPPHSSGPPPPPARGRGAPPPPPS 312



to top

>TOR2X_HUMAN (Q8N2E6) Prosalusin precursor (Torsin-2A) (Torsin family 2 member|
           A) [Contains: Salusin-alpha; Salusin-beta]
          Length = 242

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +1

Query: 427 GAHPPHRRGTGSPSPAGSNPTFRTRRSCP 513
           G  PP R G   P+PA   P  R +R+ P
Sbjct: 207 GRAPPRRSGALPPAPAAPRPALRAQRAGP 235



to top

>CR1KA_BACTM (Q45715) Pesticidal crystal protein cry1Ka (Insecticidal|
           delta-endotoxin CryIK(a)) (Crystaline entomocidal
           protoxin) (137 kDa crystal protein)
          Length = 1215

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 330 PGTSSPWPMAWGMSSSGRC 274
           PGT SPWP + G+  SGRC
Sbjct: 807 PGTESPWPSS-GVYPSGRC 824



to top

>TPT_SOLTU (P29463) Triose phosphate/phosphate translocator, chloroplast|
           precursor (cTPT) (E29)
          Length = 414

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = -1

Query: 427 LWHGAEDLIVPVGLSRYIAQRLPWVQ--YH-----ELPTAGHLFPMADGMGDVILRTMLL 269
           L HG  D I  VGL++++   L WV   YH        T   + P+   +G+V+ R  ++
Sbjct: 310 LQHGFNDAIAKVGLTKFVTD-LFWVGMFYHLYNQVATNTLERVAPLTHAVGNVLKRVFVI 368

Query: 268 G 266
           G
Sbjct: 369 G 369



to top

>LRP1_CHICK (P98157) Low-density lipoprotein receptor-related protein 1 precursor|
            (LRP) (Alpha-2-macroglobulin receptor) (A2MR)
          Length = 4543

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
 Frame = +3

Query: 303  PSAMGKRCPAVGSSWYCTHGSLCAMYRER------PTGTMRSSAPCHRCTSASSPGNGFS 464
            P   G+RC     S YC +G LC            PTG   S      CT+        +
Sbjct: 4223 PRYNGERCQINQCSDYCQNGGLCTASPSGMPTCRCPTGFTGSRCDQQVCTNYCHNNGSCT 4282

Query: 465  ISSGLQPH 488
            ++ G QP+
Sbjct: 4283 VNQGNQPN 4290


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,209,146
Number of Sequences: 219361
Number of extensions: 1743070
Number of successful extensions: 5926
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 5479
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5925
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top