>Y4597_ARATH (P0C042) Hypothetical protein At4g15970|
          Length = 367

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 46/112 (41%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
 Frame = -2

Query: 420 AELGLRVQYLDPAYVGGFCSYGKDLGKIVTMHANCCVGIGNKIKDLKGVLGDWRNY-TRM 244
           A++GL++++LD  Y GGFC   +DL K+ TMHANCCVG+ NKIKDL+ V+ DW NY +  
Sbjct: 234 AKIGLKMRFLDTKYFGGFCEPSRDLDKVCTMHANCCVGLENKIKDLRQVIVDWENYVSAA 293

Query: 243 PPWERHRAKWTVPGACIK------AEKQV*SIHSLIDGFLSRLLLIE*FNLL 106
              +     W  P  C+K        KQV S +S  + +L+ +L I+ + +L
Sbjct: 294 KTTDGQIMTWRDPENCMKQWWWRNKTKQVLSENSK-ENYLNIMLFIKTYIIL 344

>NLGN2_RAT (Q62888) Neuroligin-2 precursor|
          Length = 836

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 202 AGHGPFGPVPLPRRHP-GIVPPITQHALQILNLIPNPHAAVRV 327
           +G GP  P P P  HP G  PP    A    N +P+PH+  RV
Sbjct: 794 SGLGPPPPPPPPSLHPFGPFPPPPPTATSHNNTLPHPHSTTRV 836

>NGLN2_MOUSE (Q69ZK9) Neuroligin-2 precursor|
          Length = 836

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 202 AGHGPFGPVPLPRRHP-GIVPPITQHALQILNLIPNPHAAVRV 327
           +G GP  P P P  HP G  PP    A    N +P+PH+  RV
Sbjct: 794 SGLGPPPPPPPPSLHPFGPFPPPPPTATSHNNTLPHPHSTTRV 836

>NLGN2_HUMAN (Q8NFZ4) Neuroligin-2 precursor|
          Length = 835

 Score = 32.7 bits (73), Expect = 0.45
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +1

Query: 202 AGHGPFGPVPLPRRHP-GIVPPITQHALQILNLIPNPHAAVRV 327
           +G GP  P P P  HP G  PP    A    N +P+PH+  RV
Sbjct: 793 SGLGPPPPPPPPSLHPFGPFPPPPPTATSHNNTLPHPHSTTRV 835

>HES2_HUMAN (Q9Y543) Transcription factor HES-2 (Hairy and enhancer of split 2)|
          Length = 173

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -3

Query: 257 TIPGCRRGRGTGPNGPCPAPASKPK 183
           T+ G R G  +GP+ P PAPAS P+
Sbjct: 127 TLDGGRAGDSSGPSAPAPAPASAPE 151

>CIC_HUMAN (Q96RK0) Protein capicua homolog|
          Length = 1608

 Score = 32.3 bits (72), Expect = 0.59
 Identities = 26/75 (34%), Positives = 31/75 (41%)
 Frame = +1

Query: 151 INQ*MDGSNLFFGFDAGAGHGPFGPVPLPRRHPGIVPPITQHALQILNLIPNPHAAVRVH 330
           I Q   G     G  AGAG GP GPVPL    PG +        Q+  ++P         
Sbjct: 781 IAQGAPGGGTTAGSGAGAGSGPNGPVPLGILQPGALGK-AGGITQVQYILPT-------- 831

Query: 331 GDDLPQILTIAAEPA 375
              LPQ L +A  PA
Sbjct: 832 ---LPQQLQVAPAPA 843



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 263 GGTIPGCRRGRGTGPNGPCPAPASKP 186
           GGT  G   G G+GPNGP P    +P
Sbjct: 788 GGTTAGSGAGAGSGPNGPVPLGILQP 813

>CABP2_HUMAN (Q9NPB3) Calcium-binding protein 2 (CaBP2)|
          Length = 219

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -3

Query: 230 GTGPNGPCPAPASKPKNKFDPS 165
           G+ P G CP+P+S PK + DP+
Sbjct: 20  GSPPRGSCPSPSSSPKEQGDPA 41

>OPTIX_DROME (Q95RW8) Protein Optix (Homeobox protein SIX3) (D-Six3)|
          Length = 487

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/42 (40%), Positives = 18/42 (42%)
 Frame = -3

Query: 251 PGCRRGRGTGPNGPCPAPASKPKNKFDPSIH*LMDFSVVCYL 126
           PG   G G GP GP   P   P  K D +      FS  CYL
Sbjct: 320 PGYGGGAGAGPGGPLTGPGCLPPFKLDAA---TSLFSAGCYL 358

>PACC_PENCH (Q01864) pH-response transcription factor pacC/RIM101|
          Length = 643

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 30/105 (28%), Positives = 39/105 (37%), Gaps = 7/105 (6%)
 Frame = +2

Query: 125 ISNKRLRNPSIN-----EWMDQTCFSA--LMQAPGTVHLARCLSHGGILV*FLQSPNTPF 283
           +SN R +N  IN     E M  T + +   + A G         HGG+      SP T  
Sbjct: 313 MSNVRTKNDLINIDQFLEQMQNTIYESDENVAAAGVAQPGAHYVHGGMNHRTTHSPPTHS 372

Query: 284 RSLILFPIPTQQFACMVTIFPKSLP*LQNPPT*AGSRYCTRSPSS 418
           R   L  +P+   A      P        PP+ A S    RSP S
Sbjct: 373 RQATLLQLPSAPMAAATAHSPSVGTPALTPPSSAQSYTSNRSPIS 417

>FOXJ3_MOUSE (Q8BUR3) Forkhead box protein J3|
          Length = 623

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 214 PFGPVPLPRRHPGIVPPITQHALQILNLIPNPHAAVRVHGDDLPQILTIAAEP 372
           P  P P P++H  + PP +QH        P PH  ++ H +   Q  T+A +P
Sbjct: 398 PQHPAPHPQQHSQLQPPHSQH--------PPPHQHIQHHPNHQHQ--TLAHQP 440

>ASTL_HUMAN (Q6HA08) Astacin-like metalloendopeptidase precursor (EC 3.4.-.-)|
           (Oocyte astacin) (Ovastacin)
          Length = 431

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 23/66 (34%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
 Frame = -2

Query: 387 PAYVGGFCSYGKDLGKIVTMHANCCV--GIGNKIKDLKGVLGDWRNYTRMPPWERHRAKW 214
           P Y G F S G+  G  V   A  C+  G G  + +L  VLG W  +TR       R  W
Sbjct: 149 PMY-GCFSSVGRSGGMQVVSLAPTCLQKGRGIVLHELMHVLGFWHEHTRADRDRYIRVNW 207

Query: 213 T--VPG 202
              +PG
Sbjct: 208 NEILPG 213

>SLAP1_CLOTM (Q06852) Cell surface glycoprotein 1 precursor (Outer layer protein|
            B) (S-layer protein 1)
          Length = 1664

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -3

Query: 263  GGTIPGCRRGRGTGPNGPCPAPASKPKNKFDPS 165
            GG+  G   G GT P  P P P SKP +   P+
Sbjct: 1401 GGSGGGGGGGGGTVPTSPTPTPTSKPTSTPAPT 1433

>CIC_MOUSE (Q924A2) Protein capicua homolog|
          Length = 1606

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 25/75 (33%), Positives = 30/75 (40%)
 Frame = +1

Query: 151 INQ*MDGSNLFFGFDAGAGHGPFGPVPLPRRHPGIVPPITQHALQILNLIPNPHAAVRVH 330
           I Q   GS    G  A  G GP GPVPL    PG +        Q+  ++P         
Sbjct: 779 IAQGAPGSATPAGSGASTGSGPNGPVPLGILQPGALGK-AGGITQVQYILPT-------- 829

Query: 331 GDDLPQILTIAAEPA 375
              LPQ L +A  PA
Sbjct: 830 ---LPQQLQVAPAPA 841

>ALF1_AERPE (Q9YG90) Probable fructose-bisphosphate aldolase class 1 (EC|
           4.1.2.13) (Probable fructose-bisphosphate aldolase class
           I) (FBP aldolase)
          Length = 272

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = +1

Query: 166 DGSNLFFGFDAGAGHGPFGPVPLPRRHPGIV 258
           DG ++ F FD G  HGP G +P  R  P ++
Sbjct: 19  DGRSVIFAFDHGIEHGP-GEIPEERLDPRLL 48


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,572,816
Number of Sequences: 219361
Number of extensions: 1444497
Number of successful extensions: 4362
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4144
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4359
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)