>EDD1_MOUSE (Q80TP3) Ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic|
           discs protein homolog)
          Length = 2792

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 22/84 (26%), Positives = 39/84 (46%)
 Frame = +1

Query: 226 RASRELQLRLERQESSSRTFSSKDASSRWLCSGSGFSAR*MAMPHQEKNSTRAPTLRQAW 405
           +AS+ L+ + E ++   +T      S    CS +   A   +MP++ + ST AP   +  
Sbjct: 581 KASKTLETKPESKQEPVKTEMGPPPSPASTCSDASSIASSASMPYKRRRSTPAPREEEKV 640

Query: 406 LPLAWRNNEVAFVPNSASLPWTRV 477
               W   EV FV +  ++P  +V
Sbjct: 641 NEEQWPLREVVFVEDVKNVPVGKV 664

>EDD1_HUMAN (O95071) Ubiquitin-protein ligase EDD1 (EC 6.3.2.-) (Hyperplastic|
           discs protein homolog) (hHYD) (Progestin-induced
           protein)
          Length = 2799

 Score = 33.1 bits (74), Expect = 0.46
 Identities = 21/84 (25%), Positives = 38/84 (45%)
 Frame = +1

Query: 226 RASRELQLRLERQESSSRTFSSKDASSRWLCSGSGFSAR*MAMPHQEKNSTRAPTLRQAW 405
           +AS+  + + E ++   +T      S    CS +   A   +MP++ + ST AP   +  
Sbjct: 587 KASKTTEAKPESKQEPVKTEMGPPPSPASTCSDASSIASSASMPYKRRRSTPAPKEEEKV 646

Query: 406 LPLAWRNNEVAFVPNSASLPWTRV 477
               W   EV FV +  ++P  +V
Sbjct: 647 NEEQWSLREVVFVEDVKNVPVGKV 670

>PLCB3_MOUSE (P51432) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
            beta 3 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
            (Phospholipase C-beta-3) (PLC-beta-3)
          Length = 1234

 Score = 32.3 bits (72), Expect = 0.79
 Identities = 23/75 (30%), Positives = 36/75 (48%)
 Frame = -1

Query: 391  TWAPSCCSSPGVALPST*PKNPSPSRANGS*RLCSRMSESSTLAAPASAGAPDSLCLSIR 212
            T+  + C  PG  LPS    NP+P+  + S R     + SST ++ +S G  D L  SI 
Sbjct: 892  TYQETPCQQPGSQLPS----NPTPNPLDASPRWPPGPTTSSTSSSLSSPGQRDDLIASIL 947

Query: 211  CNGSKNRLGSTRTYE 167
               +   L   R+++
Sbjct: 948  SEVTPTPLEELRSHK 962

>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 27/114 (23%), Positives = 43/114 (37%)
 Frame = -1

Query: 493  SCPGWGRASKXXXXXXXXXXXXCSAMRGAARPAVTWAPSCCSSPGVALPST*PKNPSPSR 314
            S PG    +K             S+  G A     W  S  ++P    P+T     +PS 
Sbjct: 4524 STPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWI-STTTTPTTTTPTTSGSTVTPSS 4582

Query: 313  ANGS*RLCSRMSESSTLAAPASAGAPDSLCLSIRCNGSKNRLGSTRTYEWATSA 152
              G+      ++ ++T  A  S   P S   S + +G+   L +T T   AT +
Sbjct: 4583 IPGTTHTARVLTTTTTTVATGSMATPSS---STQTSGTPPSLTTTATTITATGS 4633

>NALDL_HUMAN (Q9UQQ1) N-acetylated-alpha-linked acidic dipeptidase-like protein|
           (EC 3.4.17.21) (NAALADase L) (Ileal dipeptidylpeptidase)
           (100 kDa ileum brush border membrane protein) (I100)
          Length = 740

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +3

Query: 42  TIPSKKKRNYNHTTPPGYRVVHLCYETKEIVSSYRRGAEVAHSYVRVEPS 191
           + PS+++ N      P   ++H C+ T+E V+  + G +V   Y    PS
Sbjct: 107 SFPSQEQPNVVDIVGPTGGIIHSCHRTEENVTGEQGGPDVVQPYAAYAPS 156

>KRP85_STRPU (P46872) Kinesin-II 85 kDa subunit (KRP-85/95 85 kDa subunit)|
          Length = 699

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 19/63 (30%), Positives = 26/63 (41%)
 Frame = -3

Query: 317 QSQRELASLLENVREXXXXXXXXXXXXXXXXLEHTLQRFQESAWLNSDI*MGHLCSSAVT 138
           + QRE+ +LLENVRE                 +   +  ++    N DI    L   A T
Sbjct: 564 EHQREMEALLENVRELSRELRLSMLIIDSFIPQEFQEMIEQYVHWNEDIGEWQLKCVAYT 623

Query: 137 GNN 129
           GNN
Sbjct: 624 GNN 626

>LV2A_HUMAN (P01704) Ig lambda chain V-II region TOG|
          Length = 111

 Score = 29.6 bits (65), Expect = 5.1
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = -1

Query: 271 STLAAPASAGAPDSLCLSIRCNGSKNRLGSTRTYEWATSAP 149
           S L  PAS  A     ++I C G+ N +GS     W    P
Sbjct: 2   SALTQPASVSASPGQSITISCTGTTNDIGSYSYVSWYQQYP 42

>Y4BB_RHISN (P55369) Hypothetical protein y4bB/y4pI precursor|
          Length = 88

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -3

Query: 404 QAC-RNVGALVLFFSWCGIAIYLAEKPEPEQSQRE 303
           QAC +++GA+V    W G+A+ +A+ P P   + E
Sbjct: 21  QACAKDMGAIVFHGLWQGLAVLIAQPPPPTHRRLE 55

>XYLA_STRLI (Q9RFM4) Xylose isomerase (EC 5.3.1.5)|
          Length = 395

 Score = 29.3 bits (64), Expect = 6.7
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = -2

Query: 513 GRGGSRDHVPAGDARPREAGAVGDEGDLVVPPC 415
           G G +   VPAG  R R  GA GD+  +  P C
Sbjct: 73  GAGVAHQAVPAGAGRDRHEGADGDDEPVHAPGC 105

>DNL4_CHICK (Q90YB1) DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV)|
           (Polydeoxyribonucleotide synthase [ATP] 4)
          Length = 912

 Score = 28.9 bits (63), Expect = 8.7
 Identities = 12/44 (27%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +1

Query: 106 TCATKLRKLFPVTAEEQRWPIHM-SELSQADSWNRCSVCSSRAS 234
           T   +L+++F    + ++ P+ + +EL +  SWN C +C  R +
Sbjct: 774 TDVAQLKEVFSRVKDNKKMPLDLIAELEERYSWNSCKLCIFRGN 817


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,875,807
Number of Sequences: 219361
Number of extensions: 1262563
Number of successful extensions: 4010
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4003
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3869946934
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)