Clone Name | rbart31f05 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_197602.1| Oryza sativa (japonica cultivar-group) putative glutathione S-transferase (OSJNBb0015I11.25), mRNA Length = 1206 Score = 194 bits (98), Expect = 2e-46 Identities = 212/250 (84%) Strand = Plus / Minus Query: 259 atcagaatggcgcctcggcggacgacgggcgctgcaggctcttgacgtacacccaggacc 318 ||||||| || ||||||||||| | |||||| | ||||||||||| | | ||| ||| Sbjct: 925 atcagaagggagcctcggcggagggcgggcggttgaggctcttgacctgcttccacgact 866 Query: 319 cgcggctcgagacggcagcccaccagcggctgacgttcctgcgggactggatgaggcggg 378 |||||| |||||| | |||||||| ||||||||||| | ||||||||| | | ||| Sbjct: 865 cgcggccggagacgtcggcccaccaccggctgacgttgcggcgggactgcagcatccgga 806 Query: 379 cagtgcgctcgtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgaggg 438 |||||| ||||| ||||||||||||||||||||| | ||| || ||||||||||||| Sbjct: 805 gcgtgcgcgggtcggcggcgaggcggtcggcgttggggaggtgcgaaaggtcggcgaggg 746 Query: 439 tgaacttgtcgccggcgaggtactcggcctcctcaagccgctggtcgtagatgtccagca 498 ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 745 tgaacttgtcgccggcgaggtactccgcctcctccagccgctgctcgtagatgtccagca 686 Query: 499 ccttgctcag 508 |||||||||| Sbjct: 685 ccttgctcag 676
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 194 bits (98), Expect = 2e-46 Identities = 212/250 (84%) Strand = Plus / Plus Query: 259 atcagaatggcgcctcggcggacgacgggcgctgcaggctcttgacgtacacccaggacc 318 ||||||| || ||||||||||| | |||||| | ||||||||||| | | ||| ||| Sbjct: 114156 atcagaagggagcctcggcggagggcgggcggttgaggctcttgacctgcttccacgact 114215 Query: 319 cgcggctcgagacggcagcccaccagcggctgacgttcctgcgggactggatgaggcggg 378 |||||| |||||| | |||||||| ||||||||||| | ||||||||| | | ||| Sbjct: 114216 cgcggccggagacgtcggcccaccaccggctgacgttgcggcgggactgcagcatccgga 114275 Query: 379 cagtgcgctcgtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgaggg 438 |||||| ||||| ||||||||||||||||||||| | ||| || ||||||||||||| Sbjct: 114276 gcgtgcgcgggtcggcggcgaggcggtcggcgttggggaggtgcgaaaggtcggcgaggg 114335 Query: 439 tgaacttgtcgccggcgaggtactcggcctcctcaagccgctggtcgtagatgtccagca 498 ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 114336 tgaacttgtcgccggcgaggtactccgcctcctccagccgctgctcgtagatgtccagca 114395 Query: 499 ccttgctcag 508 |||||||||| Sbjct: 114396 ccttgctcag 114405
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 194 bits (98), Expect = 2e-46 Identities = 212/250 (84%) Strand = Plus / Plus Query: 259 atcagaatggcgcctcggcggacgacgggcgctgcaggctcttgacgtacacccaggacc 318 ||||||| || ||||||||||| | |||||| | ||||||||||| | | ||| ||| Sbjct: 20712704 atcagaagggagcctcggcggagggcgggcggttgaggctcttgacctgcttccacgact 20712763 Query: 319 cgcggctcgagacggcagcccaccagcggctgacgttcctgcgggactggatgaggcggg 378 |||||| |||||| | |||||||| ||||||||||| | ||||||||| | | ||| Sbjct: 20712764 cgcggccggagacgtcggcccaccaccggctgacgttgcggcgggactgcagcatccgga 20712823 Query: 379 cagtgcgctcgtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgaggg 438 |||||| ||||| ||||||||||||||||||||| | ||| || ||||||||||||| Sbjct: 20712824 gcgtgcgcgggtcggcggcgaggcggtcggcgttggggaggtgcgaaaggtcggcgaggg 20712883 Query: 439 tgaacttgtcgccggcgaggtactcggcctcctcaagccgctggtcgtagatgtccagca 498 ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 20712884 tgaacttgtcgccggcgaggtactccgcctcctccagccgctgctcgtagatgtccagca 20712943 Query: 499 ccttgctcag 508 |||||||||| Sbjct: 20712944 ccttgctcag 20712953
>dbj|AB103350.1| Oryza sativa (japonica cultivar-group) GST mRNA for glutathione S-transferase, complete cd Length = 1238 Score = 194 bits (98), Expect = 2e-46 Identities = 212/250 (84%) Strand = Plus / Minus Query: 259 atcagaatggcgcctcggcggacgacgggcgctgcaggctcttgacgtacacccaggacc 318 ||||||| || ||||||||||| | |||||| | ||||||||||| | | ||| ||| Sbjct: 925 atcagaagggagcctcggcggagggcgggcggttgaggctcttgacctgcttccacgact 866 Query: 319 cgcggctcgagacggcagcccaccagcggctgacgttcctgcgggactggatgaggcggg 378 |||||| |||||| | |||||||| ||||||||||| | ||||||||| | | ||| Sbjct: 865 cgcggccggagacgtcggcccaccaccggctgacgttgcggcgggactgcagcatccgga 806 Query: 379 cagtgcgctcgtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgaggg 438 |||||| ||||| ||||||||||||||||||||| | ||| || ||||||||||||| Sbjct: 805 gcgtgcgcgggtcggcggcgaggcggtcggcgttggggaggtgcgaaaggtcggcgaggg 746 Query: 439 tgaacttgtcgccggcgaggtactcggcctcctcaagccgctggtcgtagatgtccagca 498 ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 745 tgaacttgtcgccggcgaggtactccgcctcctccagccgctgctcgtagatgtccagca 686 Query: 499 ccttgctcag 508 |||||||||| Sbjct: 685 ccttgctcag 676
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 194 bits (98), Expect = 2e-46 Identities = 212/250 (84%) Strand = Plus / Plus Query: 259 atcagaatggcgcctcggcggacgacgggcgctgcaggctcttgacgtacacccaggacc 318 ||||||| || ||||||||||| | |||||| | ||||||||||| | | ||| ||| Sbjct: 20723976 atcagaagggagcctcggcggagggcgggcggttgaggctcttgacctgcttccacgact 20724035 Query: 319 cgcggctcgagacggcagcccaccagcggctgacgttcctgcgggactggatgaggcggg 378 |||||| |||||| | |||||||| ||||||||||| | ||||||||| | | ||| Sbjct: 20724036 cgcggccggagacgtcggcccaccaccggctgacgttgcggcgggactgcagcatccgga 20724095 Query: 379 cagtgcgctcgtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgaggg 438 |||||| ||||| ||||||||||||||||||||| | ||| || ||||||||||||| Sbjct: 20724096 gcgtgcgcgggtcggcggcgaggcggtcggcgttggggaggtgcgaaaggtcggcgaggg 20724155 Query: 439 tgaacttgtcgccggcgaggtactcggcctcctcaagccgctggtcgtagatgtccagca 498 ||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| Sbjct: 20724156 tgaacttgtcgccggcgaggtactccgcctcctccagccgctgctcgtagatgtccagca 20724215 Query: 499 ccttgctcag 508 |||||||||| Sbjct: 20724216 ccttgctcag 20724225
>ref|XM_470189.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 960 Score = 147 bits (74), Expect = 4e-32 Identities = 101/110 (91%) Strand = Plus / Minus Query: 389 gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 448 ||||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||| Sbjct: 711 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 652 Query: 449 gccggcgaggtactcggcctcctcaagccgctggtcgtagatgtccagca 498 |||||| |||||| | |||||||| |||||||| |||||||||||||||| Sbjct: 651 gccggccaggtacgccgcctcctccagccgctgctcgtagatgtccagca 602 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 274 cggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 330 ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||| |||| Sbjct: 826 cggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 770
>gb|AY533122.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase GSTF14 mRNA, partial cds Length = 825 Score = 147 bits (74), Expect = 4e-32 Identities = 101/110 (91%) Strand = Plus / Minus Query: 389 gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 448 ||||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||| Sbjct: 711 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 652 Query: 449 gccggcgaggtactcggcctcctcaagccgctggtcgtagatgtccagca 498 |||||| |||||| | |||||||| |||||||| |||||||||||||||| Sbjct: 651 gccggccaggtacgccgcctcctccagccgctgctcgtagatgtccagca 602 Score = 71.9 bits (36), Expect = 2e-09 Identities = 51/56 (91%) Strand = Plus / Minus Query: 275 ggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 330 |||||||| ||||||||||||||||||||||||| |||| ||| ||||||| |||| Sbjct: 825 ggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 770
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 147 bits (74), Expect = 4e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 389 gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 448 ||||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||| Sbjct: 1919186 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 1919245 Query: 449 gccggcgaggtactcggcctcctcaagccgctggtcgtagatgtccagca 498 |||||| |||||| | |||||||| |||||||| |||||||||||||||| Sbjct: 1919246 gccggccaggtacgccgcctcctccagccgctgctcgtagatgtccagca 1919295 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 274 cggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 330 ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||| |||| Sbjct: 1919071 cggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 1919127 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 419 gtgggagaggtcggcgagggtgaacttgtcgccggcgaggtact 462 |||||| |||||||| |||||||||| ||||||||||||||||| Sbjct: 1929164 gtgggacaggtcggccagggtgaactcgtcgccggcgaggtact 1929207
>gb|AC099399.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1006F06, complete sequence Length = 122218 Score = 147 bits (74), Expect = 4e-32 Identities = 101/110 (91%) Strand = Plus / Minus Query: 389 gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 448 ||||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||| Sbjct: 56225 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 56166 Query: 449 gccggcgaggtactcggcctcctcaagccgctggtcgtagatgtccagca 498 |||||| |||||| | |||||||| |||||||| |||||||||||||||| Sbjct: 56165 gccggccaggtacgccgcctcctccagccgctgctcgtagatgtccagca 56116 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 274 cggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 330 ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||| |||| Sbjct: 56340 cggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 56284 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 419 gtgggagaggtcggcgagggtgaacttgtcgccggcgaggtact 462 |||||| |||||||| |||||||||| ||||||||||||||||| Sbjct: 46247 gtgggacaggtcggccagggtgaactcgtcgccggcgaggtact 46204
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 147 bits (74), Expect = 4e-32 Identities = 101/110 (91%) Strand = Plus / Plus Query: 389 gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 448 ||||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||| Sbjct: 1919184 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 1919243 Query: 449 gccggcgaggtactcggcctcctcaagccgctggtcgtagatgtccagca 498 |||||| |||||| | |||||||| |||||||| |||||||||||||||| Sbjct: 1919244 gccggccaggtacgccgcctcctccagccgctgctcgtagatgtccagca 1919293 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Plus Query: 274 cggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 330 ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||| |||| Sbjct: 1919069 cggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 1919125 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 419 gtgggagaggtcggcgagggtgaacttgtcgccggcgaggtact 462 |||||| |||||||| |||||||||| ||||||||||||||||| Sbjct: 1929162 gtgggacaggtcggccagggtgaactcgtcgccggcgaggtact 1929205
>dbj|AK102889.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033112M16, full insert sequence Length = 1300 Score = 147 bits (74), Expect = 4e-32 Identities = 101/110 (91%) Strand = Plus / Minus Query: 389 gtcggaggcgaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtc 448 ||||||||||||||||||||||||||| | |||||| |||||||||| |||||||||||| Sbjct: 803 gtcggaggcgaggcggtcggcgttggggaggtgggacaggtcggcgatggtgaacttgtc 744 Query: 449 gccggcgaggtactcggcctcctcaagccgctggtcgtagatgtccagca 498 |||||| |||||| | |||||||| |||||||| |||||||||||||||| Sbjct: 743 gccggccaggtacgccgcctcctccagccgctgctcgtagatgtccagca 694 Score = 73.8 bits (37), Expect = 5e-10 Identities = 52/57 (91%) Strand = Plus / Minus Query: 274 cggcggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgaga 330 ||||||||| ||||||||||||||||||||||||| |||| ||| ||||||| |||| Sbjct: 918 cggcggacggcgggcgctgcaggctcttgacgtactcccacgactcgcggctggaga 862
>gb|AF244676.1|AF244676 Zea mays glutathione S-transferase GST 11 mRNA, complete cds Length = 1279 Score = 105 bits (53), Expect = 1e-19 Identities = 179/221 (80%) Strand = Plus / Minus Query: 278 ggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgagacggcagc 337 ||||| ||||||||||||| ||||||||||| ||||| |||||| |||||| | Sbjct: 836 ggacggcgggcgctgcagggtcttgacgtacttccaggtgtcgcggccggagacgtcgtg 777 Query: 338 ccaccagcggctgacgttcctgcgggactggatgaggcgggcagtgcgctcgtcggaggc 397 |||||| | |||||||||| ||||||||| || | |||| | |||| ||||||| | Sbjct: 776 ccaccacctgctgacgttcttgcgggactcgaacatgcggcgggagcgcgggtcggagac 717 Query: 398 gaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtcgccggcgag 457 |||| |||| |||| ||||| ||| || |||||||||| |||||| ||||||||||| || Sbjct: 716 gaggtggtccgcgtagggcaggtgcgacaggtcggcgatggtgaagttgtcgccggccag 657 Query: 458 gtactcggcctcctcaagccgctggtcgtagatgtccagca 498 | || ||||||||| || ||||| |||||||||||||||| Sbjct: 656 gaacgtggcctcctccaggcgctgctcgtagatgtccagca 616
>gb|AY103672.1| Zea mays PCO064413 mRNA sequence Length = 1195 Score = 105 bits (53), Expect = 1e-19 Identities = 179/221 (80%) Strand = Plus / Minus Query: 278 ggacgacgggcgctgcaggctcttgacgtacacccaggacccgcggctcgagacggcagc 337 ||||| ||||||||||||| ||||||||||| ||||| |||||| |||||| | Sbjct: 841 ggacggcgggcgctgcagggtcttgacgtacttccaggtgtcgcggccggagacgtcgtg 782 Query: 338 ccaccagcggctgacgttcctgcgggactggatgaggcgggcagtgcgctcgtcggaggc 397 |||||| | |||||||||| ||||||||| || | |||| | |||| ||||||| | Sbjct: 781 ccaccacctgctgacgttcttgcgggactcgaacatgcggcgggagcgcgggtcggagac 722 Query: 398 gaggcggtcggcgttgggcatgtgggagaggtcggcgagggtgaacttgtcgccggcgag 457 |||| |||| |||| ||||| ||| || |||||||||| |||||| ||||||||||| || Sbjct: 721 gaggtggtccgcgtagggcaggtgcgacaggtcggcgatggtgaagttgtcgccggccag 662 Query: 458 gtactcggcctcctcaagccgctggtcgtagatgtccagca 498 | || ||||||||| || ||||| |||||||||||||||| Sbjct: 661 gaacgtggcctcctccaggcgctgctcgtagatgtccagca 621
>gb|AF244679.1|AF244679 Zea mays glutathione S-transferase GST 14 mRNA, complete cds Length = 1007 Score = 99.6 bits (50), Expect = 9e-18 Identities = 131/158 (82%) Strand = Plus / Minus Query: 347 gctgacgttcctgcgggactggatgaggcgggcagtgcgctcgtcggaggcgaggcggtc 406 ||||||||||||||| |||| |||||||| || | ||| |||| |||||||||||| Sbjct: 732 gctgacgttcctgcgcgactccatgaggcgtgcggaccgcgggtcgccggcgaggcggtc 673 Query: 407 ggcgttgggcatgtgggagaggtcggcgagggtgaacttgtcgccggcgaggtactcggc 466 ||||||||||| |||||| ||||||||||| ||||||||| | ||||| ||| | | | Sbjct: 672 ggcgttgggcaggtgggacaggtcggcgagcgtgaacttgcctccggccaggaaggcctc 613 Query: 467 ctcctcaagccgctggtcgtagatgtccagcaccttgc 504 ||| |||| ||||| |||||||||||||||| ||||| Sbjct: 612 ctcgccaaggcgctgctcgtagatgtccagcagcttgc 575 Score = 48.1 bits (24), Expect = 0.028 Identities = 33/36 (91%) Strand = Plus / Minus Query: 259 atcagaatggcgcctcggcggacgacgggcgctgca 294 ||||||| |||||||| ||||||| ||||||||||| Sbjct: 820 atcagaagggcgcctccgcggacggcgggcgctgca 785
>gb|AF244678.1|AF244678 Zea mays glutathione S-transferase GST 13 mRNA, complete cds Length = 1134 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Minus Query: 410 gttgggcatgtgggagaggtcggcgagggtgaacttgtcgccggcgaggtactcg 464 |||||||| ||||||||||||||| |||||||| | ||||||||||||||||||| Sbjct: 588 gttgggcaggtgggagaggtcggccagggtgaagtcgtcgccggcgaggtactcg 534
>ref|XM_470191.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 678 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 419 gtgggagaggtcggcgagggtgaacttgtcgccggcgaggtact 462 |||||| |||||||| |||||||||| ||||||||||||||||| Sbjct: 516 gtgggacaggtcggccagggtgaactcgtcgccggcgaggtact 473
>gb|AY533123.1| Oryza sativa (japonica cultivar-group) glutathione S-transferase GSTF15 mRNA, complete cds Length = 678 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 419 gtgggagaggtcggcgagggtgaacttgtcgccggcgaggtact 462 |||||| |||||||| |||||||||| ||||||||||||||||| Sbjct: 516 gtgggacaggtcggccagggtgaactcgtcgccggcgaggtact 473
>dbj|AK059955.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-D02, full insert sequence Length = 951 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 419 gtgggagaggtcggcgagggtgaacttgtcgccggcgaggtact 462 |||||| |||||||| |||||||||| ||||||||||||||||| Sbjct: 624 gtgggacaggtcggccagggtgaactcgtcgccggcgaggtact 581
>gb|AF244677.1|AF244677 Zea mays glutathione S-transferase GST 12 mRNA, complete cds Length = 1198 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 414 ggcatgtgggagaggtcggcgagggtgaacttgtcgccggcgaggtactcg 464 |||| ||||||||||||||| || ||||| | ||||||||||||||||||| Sbjct: 627 ggcaggtgggagaggtcggccagtgtgaagtcgtcgccggcgaggtactcg 577
>gb|AY103863.1| Zea mays PCO132785 mRNA sequence Length = 959 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 414 ggcatgtgggagaggtcggcgagggtgaacttgtcgccggcgaggtactcg 464 |||| ||||||||||||||| || ||||| | ||||||||||||||||||| Sbjct: 650 ggcaggtgggagaggtcggccagtgtgaagtcgtcgccggcgaggtactcg 600
>gb|AY111699.1| Zea mays CL1117_-2 mRNA sequence Length = 633 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Minus Query: 419 gtgggagaggtcggcgagggtgaacttgtcgccggcgaggtactcg 464 ||||||||||||||| |||||||||| |||||| || ||||||||| Sbjct: 281 gtgggagaggtcggccagggtgaactcgtcgccagccaggtactcg 236
>gb|AY657524.1| Synthetic construct Peudomonas aeruginosa clone FLH040582.01F PA1623 gene, partial cds Length = 663 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 446 gtcgccggcgaggtactcggcctc 469 |||||||||||||||||||||||| Sbjct: 459 gtcgccggcgaggtactcggcctc 436
>gb|AE004590.1| Pseudomonas aeruginosa PAO1, section 151 of 529 of the complete genome Length = 11426 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Minus Query: 446 gtcgccggcgaggtactcggcctc 469 |||||||||||||||||||||||| Sbjct: 2289 gtcgccggcgaggtactcggcctc 2266
>gb|BT009210.1| Triticum aestivum clone wle1n.pk0047.h6:fis, full insert mRNA sequence Length = 966 Score = 46.1 bits (23), Expect = 0.11 Identities = 29/31 (93%) Strand = Plus / Minus Query: 426 aggtcggcgagggtgaacttgtcgccggcga 456 |||||||| |||||||||| ||||||||||| Sbjct: 614 aggtcggcaagggtgaactcgtcgccggcga 584
>gb|BT009137.1| Triticum aestivum clone wl1n.pk0040.b1:fis, full insert mRNA sequence Length = 920 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 428 gtcggcgagggtgaacttgtcgccggcgaggtact 462 ||||||||| ||||||| ||| ||||||||||||| Sbjct: 559 gtcggcgagcgtgaactcgtccccggcgaggtact 525
>emb|X04455.1|ZMGGST3B Maize mRNA for glutathione-S-transferase GSTIII (clone GSTIIIB) Length = 859 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 428 gtcggcgagggtgaacttgtcgccggcgaggtact 462 ||||||||| ||||||| ||| ||||||||||||| Sbjct: 524 gtcggcgagcgtgaactcgtccccggcgaggtact 490
>emb|X06755.1|ZMGST3 Maize mRNA for GSH gluthathione S-transferase III (GST;EC 2.5.1.18) Length = 913 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 428 gtcggcgagggtgaacttgtcgccggcgaggtact 462 ||||||||| ||||||| ||| ||||||||||||| Sbjct: 572 gtcggcgagcgtgaactcgtccccggcgaggtact 538
>emb|X04375.1|ZMGST3A Maize mRNA for glutathione-S-transferase GSTIII (clone GSTIIIA) Length = 840 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 428 gtcggcgagggtgaacttgtcgccggcgaggtact 462 ||||||||| ||||||| ||| ||||||||||||| Sbjct: 505 gtcggcgagcgtgaactcgtccccggcgaggtact 471
>emb|AJ010296.1|ZMA010296 Zea mays mRNA for glutathione transferase III(b) Length = 944 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 428 gtcggcgagggtgaacttgtcgccggcgaggtact 462 ||||||||| ||||||| ||| ||||||||||||| Sbjct: 563 gtcggcgagcgtgaactcgtccccggcgaggtact 529
>emb|AJ010295.1|ZMA010295 Zea mays mRNA for glutathione transferase III(a) Length = 906 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 428 gtcggcgagggtgaacttgtcgccggcgaggtact 462 ||||||||| ||||||| ||| ||||||||||||| Sbjct: 574 gtcggcgagcgtgaactcgtccccggcgaggtact 540
>gb|AY105647.1| Zea mays PCO132886 mRNA sequence Length = 1003 Score = 46.1 bits (23), Expect = 0.11 Identities = 32/35 (91%) Strand = Plus / Minus Query: 428 gtcggcgagggtgaacttgtcgccggcgaggtact 462 ||||||||| ||||||| ||| ||||||||||||| Sbjct: 642 gtcggcgagcgtgaactcgtccccggcgaggtact 608
>gb|AC113334.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1123_F01, complete sequence Length = 118799 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 gtcgccggcgaggtactcggcc 467 |||||||||||||||||||||| Sbjct: 70609 gtcgccggcgaggtactcggcc 70588
>ref|NM_015313.1| Homo sapiens Rho guanine nucleotide exchange factor (GEF) 12 (ARHGEF12), mRNA Length = 9501 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 aagcattttattacgcttatta 41 |||||||||||||||||||||| Sbjct: 9260 aagcattttattacgcttatta 9239
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 gtcgccggcgaggtactcggcc 467 |||||||||||||||||||||| Sbjct: 24788626 gtcgccggcgaggtactcggcc 24788605
>gb|AF180681.1|AF180681 Homo sapiens guanine nucleotide exchange factor (LARG) mRNA, complete cds Length = 9501 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 aagcattttattacgcttatta 41 |||||||||||||||||||||| Sbjct: 9260 aagcattttattacgcttatta 9239
>dbj|AK105820.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-D05, full insert sequence Length = 1249 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Plus Query: 446 gtcgccggcgaggtactcggcc 467 |||||||||||||||||||||| Sbjct: 602 gtcgccggcgaggtactcggcc 623
>gb|AC156998.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0086B08, complete sequence Length = 148274 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 446 gtcgccggcgaggtactcggcc 467 |||||||||||||||||||||| Sbjct: 115124 gtcgccggcgaggtactcggcc 115103
>dbj|AP000758.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-775A2, complete sequence Length = 163025 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 20 aagcattttattacgcttatta 41 |||||||||||||||||||||| Sbjct: 92264 aagcattttattacgcttatta 92243
>ref|XM_715814.1| Candida albicans SC5314 translation initiation factor subunit eIF3 (CaO19_13937), mRNA Length = 2220 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 atatggtgttgatggagctgt 223 ||||||||||||||||||||| Sbjct: 381 atatggtgttgatggagctgt 401
>ref|XM_716327.1| Candida albicans SC5314 hypothetical protein (PRT1) partial mRNA Length = 2220 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 atatggtgttgatggagctgt 223 ||||||||||||||||||||| Sbjct: 381 atatggtgttgatggagctgt 401
>ref|XM_883675.1| Candida albicans SC5314 hypothetical protein (CaJ7.0160) partial mRNA Length = 2220 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 203 atatggtgttgatggagctgt 223 ||||||||||||||||||||| Sbjct: 381 atatggtgttgatggagctgt 401
>emb|CR724636.2|CNS0GM2Q Tetraodon nigroviridis full-length cDNA Length = 1372 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 gtccagcaccttgctcagatc 511 ||||||||||||||||||||| Sbjct: 449 gtccagcaccttgctcagatc 429
>emb|CR723893.2|CNS0GLI3 Tetraodon nigroviridis full-length cDNA Length = 1371 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 491 gtccagcaccttgctcagatc 511 ||||||||||||||||||||| Sbjct: 449 gtccagcaccttgctcagatc 429
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 gaaacacccatgccgatgaag 111 ||||||||||||||||||||| Sbjct: 2581489 gaaacacccatgccgatgaag 2581509
>gb|AC064846.5| Homo sapiens BAC clone RP11-59C11 from 2, complete sequence Length = 169988 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 294 aggctcttgacgtacacccag 314 ||||||||||||||||||||| Sbjct: 145115 aggctcttgacgtacacccag 145095
>emb|CR749743.13| Zebrafish DNA sequence from clone DKEY-97M3 in linkage group 4, complete sequence Length = 177044 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 attttattacgcttattatta 44 ||||||||||||||||||||| Sbjct: 18154 attttattacgcttattatta 18134
>dbj|AP006852.1| Candida albicans genomic DNA, chromosome 7, complete sequence Length = 949626 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 203 atatggtgttgatggagctgt 223 ||||||||||||||||||||| Sbjct: 304993 atatggtgttgatggagctgt 304973
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 461 ctcggcctcctcaagccgct 480 |||||||||||||||||||| Sbjct: 3739438 ctcggcctcctcaagccgct 3739419
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 238 cgacggcgatcgcgcatgga 257 |||||||||||||||||||| Sbjct: 1210101 cgacggcgatcgcgcatgga 1210120
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 aggcgaggcggtcggcgttg 413 |||||||||||||||||||| Sbjct: 56234 aggcgaggcggtcggcgttg 56253
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 394 aggcgaggcggtcggcgttg 413 |||||||||||||||||||| Sbjct: 320125 aggcgaggcggtcggcgttg 320144
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 394 aggcgaggcggtcggcgttg 413 |||||||||||||||||||| Sbjct: 163084 aggcgaggcggtcggcgttg 163065
>emb|AL606612.3|OSJN00043 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0021I10, complete sequence Length = 105538 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 227 cagcaccttctcgacggcgatcgcgcat 254 ||||||||||||||| |||||| ||||| Sbjct: 68932 cagcaccttctcgacagcgatcacgcat 68905
>emb|AJ419774.1|ALU419774 Avena sterilis subsp. ludoviciana partial mRNA for putative glutathione-S-transferase (wo2 gene) Length = 154 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 483 tcgtagatgtccagcacctt 502 |||||||||||||||||||| Sbjct: 153 tcgtagatgtccagcacctt 134
>gb|AC116529.16| Mus musculus chromosome 8, clone RP24-380O18, complete sequence Length = 166863 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 atggagctgtgggcagcacc 233 |||||||||||||||||||| Sbjct: 49000 atggagctgtgggcagcacc 49019
>emb|AJ620477.1| Angiococcus disciformis partial ORF16, ORF15, ORF14, ORF13, ORF12, ORF11, ORF10, ORF9, ORF8, ORF7, ORF6, ORF5, ORF4, ORF3, tubA gene, ORF2, tubZ gene, ORF1, tubB gene, tubC gene, tubD gene, tubE gene, tubF gene, ORF17, ORF18, ORF19, ORF20, tubG gene, ORF21, ORF22, ORF23 and ORF24, strain An d48 Length = 82868 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 492 tccagcaccttgctcagatc 511 |||||||||||||||||||| Sbjct: 71831 tccagcaccttgctcagatc 71850
>dbj|BA000038.2| Vibrio vulnificus YJ016 DNA, chromosome II, complete sequence Length = 1857073 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 tgccacggatatggtgttgatgga 218 |||| ||||||||||||||||||| Sbjct: 324165 tgccgcggatatggtgttgatgga 324188
>dbj|AB206858.1| Prunus persica DNA, microsatellite marker MA066a Length = 659 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 gtactcggcctcctcaagcc 477 |||||||||||||||||||| Sbjct: 287 gtactcggcctcctcaagcc 306
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 tcggaggcgaggcggtcggcgttg 413 |||||||||||| ||||||||||| Sbjct: 52772 tcggaggcgaggtggtcggcgttg 52795
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 227 cagcaccttctcgacggcgatcgcgcat 254 ||||||||||||||| |||||| ||||| Sbjct: 756792 cagcaccttctcgacagcgatcacgcat 756765
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 382 tgcgctcgtcggaggcgaggcggtcggc 409 |||||||||||| |||||||||| |||| Sbjct: 2286655 tgcgctcgtcggtggcgaggcgggcggc 2286682
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 382 tgcgctcgtcggaggcgagg 401 |||||||||||||||||||| Sbjct: 1961481 tgcgctcgtcggaggcgagg 1961462
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 16 gggaaagcattttattacgcttattatt 43 ||||||||||| ||||| |||||||||| Sbjct: 1632768 gggaaagcattctattaagcttattatt 1632741
>gb|AE016796.1| Vibrio vulnificus CMCP6 chromosome II, complete sequence Length = 1844853 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 195 tgccacggatatggtgttgatgga 218 |||| ||||||||||||||||||| Sbjct: 1598730 tgccgcggatatggtgttgatgga 1598753
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 91 gaaacacccatgccgatgaagaagaacg 118 ||||||||||| ||||||| |||||||| Sbjct: 459119 gaaacacccatcccgatgaggaagaacg 459092
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 382 tgcgctcgtcggaggcgaggcggtcggc 409 |||||||||||| |||||||||| |||| Sbjct: 2286599 tgcgctcgtcggtggcgaggcgggcggc 2286626
>emb|AL954364.5|CNS08CCZ Oryza sativa chromosome 12, . BAC OSJNBa0023M16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 156258 Score = 40.1 bits (20), Expect = 6.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 382 tgcgctcgtcggaggcgaggcggtcggc 409 |||||||||||| |||||||||| |||| Sbjct: 11846 tgcgctcgtcggtggcgaggcgggcggc 11873 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,494,438 Number of Sequences: 3902068 Number of extensions: 3494438 Number of successful extensions: 66941 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66267 Number of HSP's gapped (non-prelim): 672 length of query: 512 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 489 effective length of database: 17,143,297,704 effective search space: 8383072577256 effective search space used: 8383072577256 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)