ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart31e12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome ... 111 2e-21
2dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 111 2e-21
3dbj|AK066539.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
4dbj|AK064705.1| Oryza sativa (japonica cultivar-group) cDNA clon... 111 2e-21
5emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 46 0.11
6gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 44 0.42
7emb|BX255942.5| Zebrafish DNA sequence from clone DKEY-269K6 in ... 44 0.42
8ref|XM_518429.1| PREDICTED: Pan troglodytes similar to solute ca... 42 1.7
9ref|NM_138718.1| Homo sapiens solute carrier family 26, member 8... 42 1.7
10ref|NM_052961.2| Homo sapiens solute carrier family 26, member 8... 42 1.7
11gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
12gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
13gb|AY743436.1| Bacillus thuringiensis strain WY-197 Vip3A gene, ... 42 1.7
14gb|DQ497637.1| Bacillus thuringiensis strain 4.0718 vegetative i... 42 1.7
15gb|AY739647.1| Bacillus thuringiensis vegetative insecticidal pr... 42 1.7
16gb|AY489126.1| Bacillus thuringiensis strain C9 vegetative insec... 42 1.7
17gb|AF500478.2| Bacillus thuringiensis vegetative insecticidal pr... 42 1.7
18gb|AF373030.1| Bacillus thuringiensis vegetative insecticidal pr... 42 1.7
19emb|AJ971413.1| Bacillus thuringiensis vip3A gene for vegetative... 42 1.7
20emb|AL133507.8| Human DNA sequence from clone RP11-482O9 on chro... 42 1.7
21emb|Y17158.1|BTY17158 Bacillus thuringiensis vip-s gene 42 1.7
22gb|BC025408.2| Homo sapiens solute carrier family 26, member 8, ... 42 1.7
23emb|AJ248284.1|CNSPAX02 Pyrococcus abyssi complete genome; segme... 42 1.7
24emb|BX640697.1|HSM806766 Homo sapiens genomic DNA; cDNA DKFZp686... 42 1.7
25dbj|AK125189.1| Homo sapiens cDNA FLJ43199 fis, clone FEBRA20077... 42 1.7
26dbj|AK122928.1| Homo sapiens cDNA FLJ16615 fis, clone TESTI40134... 42 1.7
27dbj|AK097410.1| Homo sapiens cDNA FLJ40091 fis, clone TESTI20036... 42 1.7
28gb|AF331522.1| Homo sapiens putative anion transporter (SLC26A8)... 42 1.7
29gb|AY074708.1| Bacillus thuringiensis strain 611 Vip3A (vip3A) g... 42 1.7
30gb|AY074707.1| Bacillus thuringiensis strain S101 Vip3A (vip3A) ... 42 1.7
31gb|AC079118.5| Homo sapiens BAC clone RP11-260K18 from 4, comple... 42 1.7
32gb|AF314959.1|AF314959 Homo sapiens anion transporter/exchanger-... 42 1.7
33gb|AF399667.1|AF399667S1 Bacillus thuringiensis strain HD125 ins... 42 1.7
34gb|AY044227.1| Bacillus thuringiensis serovar leesis vegetative ... 42 1.7
35gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.7
36dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
37gb|DQ016969.1| Bacillus thuringiensis strain LS8 vegetative inse... 42 1.7
38gb|DQ016968.1| Bacillus thuringiensis strain LS1 vegetative inse... 42 1.7
39gb|AY187679.1| Bacillus thuringiensis Vip184 gene, complete cds 42 1.7
40gb|AF403499.1| Mus musculus SLC26A8 anion exchanger mRNA, comple... 42 1.7
41emb|BX005292.13| Mouse DNA sequence from clone RP24-407G18 on ch... 42 1.7
42gb|AY945939.1| Bacillus thuringiensis strain 9816C vegetative in... 42 1.7
43dbj|AK129137.1| Mus musculus mRNA for mKIAA0425 protein 42 1.7
44gb|AY739665.1| Bacillus thuringiensis vegetative insecticidal pr... 42 1.7
45gb|AY074706.1| Bacillus thuringiensis strain S184 Vip3A (vip3A) ... 42 1.7
46gb|AY295778.1| Bacillus thuringiensis vegetative insecticidal pr... 42 1.7
47gb|AF548629.1| Bacillus thuringiensis serovar tolworthi vegetati... 42 1.7
48emb|AJ872070.1| Bacillus thuringiensis gene for Isp3a protein 42 1.7
49gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.7
50gb|L48812.1|BACVIP3AB Bacillus thuringiensis strain AB424 insect... 42 1.7
51gb|L48811.1|BACVIP3AA Bacillus thuringienis strain AB88 insectic... 42 1.7
52gb|U34373.1|HSTECTXT07 Human tyrosine kinase TXK (txk) gene, exo... 42 1.7
53emb|AL606985.26| Mouse DNA sequence from clone RP23-153M14 on ch... 42 1.7
54ref|NM_188669.1| Oryza sativa (japonica cultivar-group), Ozsa827... 40 6.5
55ref|XM_507951.1| PREDICTED: Pan troglodytes similar to B-cell li... 40 6.5
56ref|NM_001031432.1| Gallus gallus glucosamine (UDP-N-acetyl)-2-e... 40 6.5
57gb|AC119200.5| Mus musculus chromosome 8, clone RP24-181K12, com... 40 6.5
58gb|AC119161.8| Mus musculus chromosome 8, clone RP24-486O22, com... 40 6.5
59gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 40 6.5
60gb|AC147229.5| Mus musculus BAC clone RP23-236E9 from chromosome... 40 6.5
61gb|AC141880.3| Mus musculus BAC clone RP24-220N1 from chromosome... 40 6.5
62gb|AC146188.3| Pan troglodytes BAC clone RP43-35J3 from 7, compl... 40 6.5
63ref|XM_535134.2| PREDICTED: Canis familiaris similar to plasma g... 40 6.5
64gb|AC124200.4| Mus musculus BAC clone RP23-328F5 from chromosome... 40 6.5
65emb|CR702391.2|CNS0G4WZ Tetraodon nigroviridis full-length cDNA 40 6.5
66emb|AL133342.14| Human DNA sequence from clone RP5-906C1 on chro... 40 6.5
67gb|AC163347.4| Mus musculus BAC clone RP23-259F13 from chromosom... 40 6.5
68emb|AJ851553.1| Gallus gallus mRNA for hypothetical protein, clo... 40 6.5
69gb|AC112906.3| Homo sapiens 3 BAC RP11-498P15 (Roswell Park Canc... 40 6.5
70gb|AC067942.6| Homo sapiens BAC clone RP11-791G16 from 4, comple... 40 6.5
71gb|CP000249.1| Frankia sp. CcI3, complete genome 40 6.5
72dbj|AK036283.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 40 6.5
73emb|BX932778.2| Gallus gallus finished cDNA, clone ChEST479i21 40 6.5
74dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
75gb|AC024706.6| Homo sapiens BAC clone RP11-119J20 from 4, comple... 40 6.5
76dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
77dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 40 6.5
78ref|XM_318627.2| Anopheles gambiae str. PEST ENSANGP00000020973 ... 40 6.5
79gb|AF106573.2| Caenorhabditis elegans cosmid F52D2, complete seq... 40 6.5 
>gb|AC108759.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
              OSJNBa0072P02, complete sequence
          Length = 157488

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                          
Query: 313    ccggtgccggctggtagagcgggaaaggcatgaagggcggctgcaggaacggcaccagcc 372
              |||| ||||||||||| |||| ||| |||| ||| |||||| ||||||| ||||||||||
Sbjct: 117990 ccggcgccggctggtacagcgtgaatggcaagaacggcggccgcaggaatggcaccagcc 118049

                                                      
Query: 373    actccggcacgtggaatggccacgggaacgacaccgtccc 412
              | ||||||||| |||| |||||||||||||||||||||||
Sbjct: 118050 agtccggcacggggaacggccacgggaacgacaccgtccc 118089



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 455    cggcggccagaagagcggcaggaacggcc 483
              |||||||||||||||||||| ||||||||
Sbjct: 118114 cggcggccagaagagcggcaagaacggcc 118142
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                            
Query: 313      ccggtgccggctggtagagcgggaaaggcatgaagggcggctgcaggaacggcaccagcc 372
                |||| ||||||||||| |||| ||| |||| ||| |||||| ||||||| ||||||||||
Sbjct: 19398764 ccggcgccggctggtacagcgtgaatggcaagaacggcggccgcaggaatggcaccagcc 19398823

                                                        
Query: 373      actccggcacgtggaatggccacgggaacgacaccgtccc 412
                | ||||||||| |||| |||||||||||||||||||||||
Sbjct: 19398824 agtccggcacggggaacggccacgggaacgacaccgtccc 19398863



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 455      cggcggccagaagagcggcaggaacggcc 483
                |||||||||||||||||||| ||||||||
Sbjct: 19398888 cggcggccagaagagcggcaagaacggcc 19398916
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>dbj|AK066539.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013068N24, full
           insert sequence
          Length = 1777

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Plus

                                                                       
Query: 313 ccggtgccggctggtagagcgggaaaggcatgaagggcggctgcaggaacggcaccagcc 372
           |||| ||||||||||| |||| ||| |||| ||| |||||| ||||||| ||||||||||
Sbjct: 515 ccggcgccggctggtacagcgtgaatggcaagaacggcggccgcaggaatggcaccagcc 574

                                                   
Query: 373 actccggcacgtggaatggccacgggaacgacaccgtccc 412
           | ||||||||| |||| |||||||||||||||||||||||
Sbjct: 575 agtccggcacggggaacggccacgggaacgacaccgtccc 614



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 455 cggcggccagaagagcggcaggaacggcc 483
           |||||||||||||||||||| ||||||||
Sbjct: 639 cggcggccagaagagcggcaagaacggcc 667
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>dbj|AK064705.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-118-A04, full
           insert sequence
          Length = 1090

 Score =  111 bits (56), Expect = 2e-21
 Identities = 89/100 (89%)
 Strand = Plus / Minus

                                                                       
Query: 313 ccggtgccggctggtagagcgggaaaggcatgaagggcggctgcaggaacggcaccagcc 372
           |||| ||||||||||| |||| ||| |||| ||| |||||| ||||||| ||||||||||
Sbjct: 802 ccggcgccggctggtacagcgtgaatggcaagaacggcggccgcaggaatggcaccagcc 743

                                                   
Query: 373 actccggcacgtggaatggccacgggaacgacaccgtccc 412
           | ||||||||| |||| |||||||||||||||||||||||
Sbjct: 742 agtccggcacggggaacggccacgggaacgacaccgtccc 703



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 455 cggcggccagaagagcggcaggaacggcc 483
           |||||||||||||||||||| ||||||||
Sbjct: 678 cggcggccagaagagcggcaagaacggcc 650
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 143     aagaaactaaatttctaacaatt 165
               |||||||||||||||||||||||
Sbjct: 1182940 aagaaactaaatttctaacaatt 1182918
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>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 133    tcaagcaataaagaaactaaat 154
              ||||||||||||||||||||||
Sbjct: 303982 tcaagcaataaagaaactaaat 303961
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>emb|BX255942.5| Zebrafish DNA sequence from clone DKEY-269K6 in linkage group 5, complete
              sequence
          Length = 203225

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 71     catttatcaggtcaatgagcac 92
              ||||||||||||||||||||||
Sbjct: 108879 catttatcaggtcaatgagcac 108900
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>ref|XM_518429.1| PREDICTED: Pan troglodytes similar to solute carrier family 26,
           member 8 isoform a; anion transporter/exchanger-8;
           testis anion transporter 1 (LOC462641), mRNA
          Length = 1347

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 167 atcttggcaagaaggctgaaatctcgtgt 195
           ||||||| |||||||||||||||| ||||
Sbjct: 287 atcttgggaagaaggctgaaatctggtgt 259
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>ref|NM_138718.1| Homo sapiens solute carrier family 26, member 8 (SLC26A8),
           transcript variant 2, mRNA
          Length = 3159

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 167 atcttggcaagaaggctgaaatctcgtgt 195
           ||||||| |||||||||||||||| ||||
Sbjct: 921 atcttgggaagaaggctgaaatctggtgt 893
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>ref|NM_052961.2| Homo sapiens solute carrier family 26, member 8 (SLC26A8), transcript
            variant 1, mRNA
          Length = 3400

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 167  atcttggcaagaaggctgaaatctcgtgt 195
            ||||||| |||||||||||||||| ||||
Sbjct: 1169 atcttgggaagaaggctgaaatctggtgt 1141
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>gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0065C11,
              complete sequence
          Length = 141578

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 415    cggcggctcccggcgcggcgg 435
              |||||||||||||||||||||
Sbjct: 129886 cggcggctcccggcgcggcgg 129906
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>gb|AC134344.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0059K16, complete sequence
          Length = 139615

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 415  cggcggctcccggcgcggcgg 435
            |||||||||||||||||||||
Sbjct: 8175 cggcggctcccggcgcggcgg 8195
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>gb|AY743436.1| Bacillus thuringiensis strain WY-197 Vip3A gene, complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|DQ497637.1| Bacillus thuringiensis strain 4.0718 vegetative insecticidal protein
            (vip3-Bt4) gene, complete cds
          Length = 2380

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|AY739647.1| Bacillus thuringiensis vegetative insecticidal protein (vip3BR) gene,
            complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|AY489126.1| Bacillus thuringiensis strain C9 vegetative insecticidal protein
            (vip3A) gene, complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|AF500478.2| Bacillus thuringiensis vegetative insecticidal protein (vip3A-WB5)
            gene, complete cds
          Length = 2456

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1605 aagcaataaagaaactaaatt 1625
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>gb|AF373030.1| Bacillus thuringiensis vegetative insecticidal protein Vip3V (vip3V)
            gene, complete cds
          Length = 4490

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 2295 aagcaataaagaaactaaatt 2315
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>emb|AJ971413.1| Bacillus thuringiensis vip3A gene for vegetative insecticidal protein
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>emb|AL133507.8| Human DNA sequence from clone RP11-482O9 on chromosome 6 Contains the
             3' end of the SLC26A8 gene for solute carrier family 26
             member 8, complete sequence
          Length = 55001

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 167   atcttggcaagaaggctgaaatctcgtgt 195
             ||||||| |||||||||||||||| ||||
Sbjct: 38031 atcttgggaagaaggctgaaatctggtgt 38059
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>emb|Y17158.1|BTY17158 Bacillus thuringiensis vip-s gene
          Length = 2630

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1818 aagcaataaagaaactaaatt 1838
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>gb|BC025408.2| Homo sapiens solute carrier family 26, member 8, transcript variant
           2, mRNA (cDNA clone MGC:33565 IMAGE:4823098), complete
           cds
          Length = 3159

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 167 atcttggcaagaaggctgaaatctcgtgt 195
           ||||||| |||||||||||||||| ||||
Sbjct: 921 atcttgggaagaaggctgaaatctggtgt 893
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>emb|AJ248284.1|CNSPAX02 Pyrococcus abyssi complete genome; segment 2/6
          Length = 293250

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 195    tcttgtcaagcttctccctga 215
              |||||||||||||||||||||
Sbjct: 236093 tcttgtcaagcttctccctga 236073
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>emb|BX640697.1|HSM806766 Homo sapiens genomic DNA; cDNA DKFZp686I2225 (from clone
           DKFZp686I2225)
          Length = 2448

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 gcatgcatgacaagcagtcaa 136
           |||||||||||||||||||||
Sbjct: 629 gcatgcatgacaagcagtcaa 609
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>dbj|AK125189.1| Homo sapiens cDNA FLJ43199 fis, clone FEBRA2007708, weakly  similar
            to DRA PROTEIN
          Length = 2991

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 167  atcttggcaagaaggctgaaatctcgtgt 195
            ||||||| |||||||||||||||| ||||
Sbjct: 1425 atcttgggaagaaggctgaaatctggtgt 1397
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>dbj|AK122928.1| Homo sapiens cDNA FLJ16615 fis, clone TESTI4013410, weakly  similar
            to Homo sapiens solute carrier family 26, member 6
            (SLC26A6)
          Length = 3403

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 167  atcttggcaagaaggctgaaatctcgtgt 195
            ||||||| |||||||||||||||| ||||
Sbjct: 1181 atcttgggaagaaggctgaaatctggtgt 1153
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>dbj|AK097410.1| Homo sapiens cDNA FLJ40091 fis, clone TESTI2003638, weakly similar
           to DRA PROTEIN (DOWN-REGULATED IN ADENOMA)
          Length = 2489

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 167 atcttggcaagaaggctgaaatctcgtgt 195
           ||||||| |||||||||||||||| ||||
Sbjct: 267 atcttgggaagaaggctgaaatctggtgt 239
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>gb|AF331522.1| Homo sapiens putative anion transporter (SLC26A8) mRNA, complete cds
          Length = 3386

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 167  atcttggcaagaaggctgaaatctcgtgt 195
            ||||||| |||||||||||||||| ||||
Sbjct: 1149 atcttgggaagaaggctgaaatctggtgt 1121
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>gb|AY074708.1| Bacillus thuringiensis strain 611 Vip3A (vip3A) gene, complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|AY074707.1| Bacillus thuringiensis strain S101 Vip3A (vip3A) gene, complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|AC079118.5| Homo sapiens BAC clone RP11-260K18 from 4, complete sequence
          Length = 158801

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 116  gcatgcatgacaagcagtcaa 136
            |||||||||||||||||||||
Sbjct: 2135 gcatgcatgacaagcagtcaa 2155
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>gb|AF314959.1|AF314959 Homo sapiens anion transporter/exchanger-8 (SLC26A8) mRNA, complete
            cds
          Length = 3322

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 167  atcttggcaagaaggctgaaatctcgtgt 195
            ||||||| |||||||||||||||| ||||
Sbjct: 1075 atcttgggaagaaggctgaaatctggtgt 1047
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>gb|AF399667.1|AF399667S1 Bacillus thuringiensis strain HD125 insecticidal protein Vip3A
            (vip3A) gene, partial cds
          Length = 2186

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1774 aagcaataaagaaactaaatt 1794
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>gb|AY044227.1| Bacillus thuringiensis serovar leesis vegetative insecticidal protein
            (vip83) gene, complete cds
          Length = 2500

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1608 aagcaataaagaaactaaatt 1628
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 423    cccggcgcggcgggcgacggg 443
              |||||||||||||||||||||
Sbjct: 626344 cccggcgcggcgggcgacggg 626364
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 415      cggcggctcccggcgcggcgg 435
                |||||||||||||||||||||
Sbjct: 14591881 cggcggctcccggcgcggcgg 14591901
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>gb|DQ016969.1| Bacillus thuringiensis strain LS8 vegetative insecticidal protein
            (vip3A) gene, complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|DQ016968.1| Bacillus thuringiensis strain LS1 vegetative insecticidal protein
            (vip3A) gene, complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|AY187679.1| Bacillus thuringiensis Vip184 gene, complete cds
          Length = 3531

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 2296 aagcaataaagaaactaaatt 2316
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>gb|AF403499.1| Mus musculus SLC26A8 anion exchanger mRNA, complete cds
          Length = 3322

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 167  atcttggcaagaaggctgaaatctcgtgt 195
            ||||||| |||||||||||||||| ||||
Sbjct: 1075 atcttgggaagaaggctgaaatctggtgt 1047
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>emb|BX005292.13| Mouse DNA sequence from clone RP24-407G18 on chromosome 4, complete
              sequence
          Length = 168795

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 201    caagcttctccctgaagttct 221
              |||||||||||||||||||||
Sbjct: 165646 caagcttctccctgaagttct 165626
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>gb|AY945939.1| Bacillus thuringiensis strain 9816C vegetative insecticidal protein
            gene, complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>dbj|AK129137.1| Mus musculus mRNA for mKIAA0425 protein
          Length = 5456

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 415 cggcggctcccggcgcggcgg 435
           |||||||||||||||||||||
Sbjct: 303 cggcggctcccggcgcggcgg 283
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>gb|AY739665.1| Bacillus thuringiensis vegetative insecticidal protein (vip3LB) gene,
            complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|AY074706.1| Bacillus thuringiensis strain S184 Vip3A (vip3A) gene, complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|AY295778.1| Bacillus thuringiensis vegetative insecticidal protein Vip3A gene,
            complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|AF548629.1| Bacillus thuringiensis serovar tolworthi vegetative insecticidal
            protein gene, complete cds
          Length = 2370

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>emb|AJ872070.1| Bacillus thuringiensis gene for Isp3a protein
          Length = 2367

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1560 aagcaataaagaaactaaatt 1580
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 422     tcccggcgcggcgggcgacgg 442
               |||||||||||||||||||||
Sbjct: 4405445 tcccggcgcggcgggcgacgg 4405425
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>gb|L48812.1|BACVIP3AB Bacillus thuringiensis strain AB424 insecticidal protein (vip3A(b))
            gene, complete cds
          Length = 2612

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 1677 aagcaataaagaaactaaatt 1697
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>gb|L48811.1|BACVIP3AA Bacillus thuringienis strain AB88 insecticidal protein (vip3A(a))
            gene, complete cds
          Length = 4483

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 135  aagcaataaagaaactaaatt 155
            |||||||||||||||||||||
Sbjct: 2298 aagcaataaagaaactaaatt 2318
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>gb|U34373.1|HSTECTXT07 Human tyrosine kinase TXK (txk) gene, exons 7 and 8
          Length = 2291

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 116  gcatgcatgacaagcagtcaa 136
            |||||||||||||||||||||
Sbjct: 2232 gcatgcatgacaagcagtcaa 2212
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>emb|AL606985.26| Mouse DNA sequence from clone RP23-153M14 on chromosome 4, complete
             sequence
          Length = 193947

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 415   cggcggctcccggcgcggcgg 435
             |||||||||||||||||||||
Sbjct: 21113 cggcggctcccggcgcggcgg 21133
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>ref|NM_188669.1| Oryza sativa (japonica cultivar-group), Ozsa8272 predicted mRNA
          Length = 1242

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Plus

                                           
Query: 433 cgggcgacggg-agcccaaacggcggcggcca 463
           ||||||||||| || |||||||||||||||||
Sbjct: 718 cgggcgacggggaggccaaacggcggcggcca 749
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>ref|XM_507951.1| PREDICTED: Pan troglodytes similar to B-cell linker; B cell linker
           protein (LOC450641), mRNA
          Length = 858

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 351 ggctgcaggaacggcaccagccac 374
           ||||||||||||||||| ||||||
Sbjct: 179 ggctgcaggaacggcacgagccac 202
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>ref|NM_001031432.1| Gallus gallus glucosamine
           (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
           (GNE), mRNA
          Length = 4365

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 416 ggcggctcccggcgcggcgg 435
           ||||||||||||||||||||
Sbjct: 85  ggcggctcccggcgcggcgg 66
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>gb|AC119200.5| Mus musculus chromosome 8, clone RP24-181K12, complete sequence
          Length = 181206

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 67     ggcacatttatcaggtcaatgagc 90
              |||||| |||||||||||||||||
Sbjct: 165030 ggcacagttatcaggtcaatgagc 165007
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>gb|AC119161.8| Mus musculus chromosome 8, clone RP24-486O22, complete sequence
          Length = 161018

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 67    ggcacatttatcaggtcaatgagc 90
             |||||| |||||||||||||||||
Sbjct: 61537 ggcacagttatcaggtcaatgagc 61560
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 294   ggcggcgccgatgatgaccccggt 317
             ||||||||||||||||| ||||||
Sbjct: 72684 ggcggcgccgatgatgagcccggt 72661
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>gb|AC147229.5| Mus musculus BAC clone RP23-236E9 from chromosome 19, complete sequence
          Length = 162400

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   gatcttggcaagaaggctga 185
             ||||||||||||||||||||
Sbjct: 46412 gatcttggcaagaaggctga 46431
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>gb|AC141880.3| Mus musculus BAC clone RP24-220N1 from chromosome 15, complete sequence
          Length = 185646

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 410    ccctccggcggctcccggcg 429
              ||||||||||||||||||||
Sbjct: 130178 ccctccggcggctcccggcg 130159
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>gb|AC146188.3| Pan troglodytes BAC clone RP43-35J3 from 7, complete sequence
          Length = 161143

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 205   cttctccctgaagttctgat 224
             ||||||||||||||||||||
Sbjct: 72381 cttctccctgaagttctgat 72400
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>ref|XM_535134.2| PREDICTED: Canis familiaris similar to plasma glutamate
            carboxypeptidase (LOC477946), mRNA
          Length = 1979

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 444  agcccaaacggcggcggcca 463
            ||||||||||||||||||||
Sbjct: 1587 agcccaaacggcggcggcca 1568
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>gb|AC124200.4| Mus musculus BAC clone RP23-328F5 from chromosome 8, complete sequence
          Length = 215638

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     taagagaaaagaaatctaga 21
             ||||||||||||||||||||
Sbjct: 91231 taagagaaaagaaatctaga 91250
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>emb|CR702391.2|CNS0G4WZ Tetraodon nigroviridis full-length cDNA
          Length = 1067

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 407 cgtccctccggcggctcccg 426
           ||||||||||||||||||||
Sbjct: 595 cgtccctccggcggctcccg 614
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>emb|AL133342.14| Human DNA sequence from clone RP5-906C1 on chromosome 20 Contains the
             5' end of the gene for P-Rex1 protein (KIAA1415, PREX1)
             and a CpG Island, complete sequence
          Length = 110814

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 419   ggctcccggcgcggcgggcg 438
             ||||||||||||||||||||
Sbjct: 49189 ggctcccggcgcggcgggcg 49208
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>gb|AC163347.4| Mus musculus BAC clone RP23-259F13 from chromosome 18, complete sequence
          Length = 184836

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    aagcaataaagaaactaaat 154
              ||||||||||||||||||||
Sbjct: 120491 aagcaataaagaaactaaat 120510
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>emb|AJ851553.1| Gallus gallus mRNA for hypothetical protein, clone 6o2
          Length = 4365

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 416 ggcggctcccggcgcggcgg 435
           ||||||||||||||||||||
Sbjct: 85  ggcggctcccggcgcggcgg 66
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>gb|AC112906.3| Homo sapiens 3 BAC RP11-498P15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 117771

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 125   acaagcagtcaagcaataaagaaactaa 152
             |||||||| ||||||| |||||||||||
Sbjct: 18119 acaagcagacaagcaaaaaagaaactaa 18146
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>gb|AC067942.6| Homo sapiens BAC clone RP11-791G16 from 4, complete sequence
          Length = 187399

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 193    tgtcttgtcaagcttctccc 212
              ||||||||||||||||||||
Sbjct: 184261 tgtcttgtcaagcttctccc 184280
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 423     cccggcgcggcgggcgacgg 442
               ||||||||||||||||||||
Sbjct: 3165167 cccggcgcggcgggcgacgg 3165186
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>dbj|AK036283.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630053L01
            product:unclassifiable, full insert sequence
          Length = 3686

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 166  gatcttggcaagaaggctga 185
            ||||||||||||||||||||
Sbjct: 1170 gatcttggcaagaaggctga 1151
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>emb|BX932778.2| Gallus gallus finished cDNA, clone ChEST479i21
          Length = 818

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 420 gctcccggcgcggcgggcga 439
           ||||||||||||||||||||
Sbjct: 247 gctcccggcgcggcgggcga 266
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                               
Query: 433     cgggcgacggg-agcccaaacggcggcggcca 463
               ||||||||||| || |||||||||||||||||
Sbjct: 7525176 cgggcgacggggaggccaaacggcggcggcca 7525145
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>gb|AC024706.6| Homo sapiens BAC clone RP11-119J20 from 4, complete sequence
          Length = 169557

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 120    gcatgacaagcagtcaagca 139
              ||||||||||||||||||||
Sbjct: 112678 gcatgacaagcagtcaagca 112697
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>dbj|AP001539.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0708G02
          Length = 168976

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 30/32 (93%), Gaps = 1/32 (3%)
 Strand = Plus / Minus

                                             
Query: 433   cgggcgacggg-agcccaaacggcggcggcca 463
             ||||||||||| || |||||||||||||||||
Sbjct: 73968 cgggcgacggggaggccaaacggcggcggcca 73937
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>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   tcttggcaagaaggctgaaa 187
             ||||||||||||||||||||
Sbjct: 60362 tcttggcaagaaggctgaaa 60381
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>ref|XM_318627.2| Anopheles gambiae str. PEST ENSANGP00000020973 (ENSANGG00000018484),
            partial mRNA
          Length = 2865

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 350  cggctgcaggaacggcacca 369
            ||||||||||||||||||||
Sbjct: 1710 cggctgcaggaacggcacca 1691
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>gb|AF106573.2| Caenorhabditis elegans cosmid F52D2, complete sequence
          Length = 41385

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 212   ctgaagttctgattctgaag 231
             ||||||||||||||||||||
Sbjct: 28419 ctgaagttctgattctgaag 28438


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,033,565
Number of Sequences: 3902068
Number of extensions: 4033565
Number of successful extensions: 85737
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 85025
Number of HSP's gapped (non-prelim): 715
length of query: 483
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 461
effective length of database: 17,147,199,772
effective search space: 7904859094892
effective search space used: 7904859094892
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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