ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart31e10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467091.1| Oryza sativa (japonica cultivar-group), mRNA 66 1e-07
2dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
3dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
4dbj|AK062922.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 1e-07
5emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro... 66 1e-07
6gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 44 0.40
7gb|AC127300.3| Mus musculus BAC clone RP23-264J18 from chromosom... 44 0.40
8dbj|AK086041.1| Mus musculus 16 days neonate heart cDNA, RIKEN f... 44 0.40
9gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 42 1.6
10gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 1.6
11emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genom... 42 1.6
12gb|AC092916.6| Homo sapiens 3 BAC RP11-615J4 (Roswell Park Cance... 42 1.6
13gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 42 1.6
14gb|AY938407.1| Uncultured eukaryote clone ENI47296.00339 18S rib... 42 1.6
15gb|AY938380.1| Uncultured eukaryote clone ENI47296.00298 18S rib... 42 1.6
16gb|AY938362.1| Uncultured eukaryote clone ENI47296.00256 18S rib... 42 1.6
17gb|AY938336.1| Uncultured eukaryote clone ENI47296.00208 18S rib... 42 1.6
18gb|AY938304.1| Uncultured eukaryote clone ENI47296.00151 18S rib... 42 1.6
19gb|AY938212.1| Uncultured eukaryote clone ENI42482.00364 18S rib... 42 1.6
20gb|AY938060.1| Uncultured eukaryote clone ENI42482.00172 18S rib... 42 1.6
21gb|AY937894.1| Uncultured eukaryote clone ENI40076.00794 18S rib... 42 1.6
22gb|AY937836.1| Uncultured eukaryote clone ENI40076.00722 18S rib... 42 1.6
23gb|AY937612.1| Uncultured eukaryote clone ENI40076.00315 18S rib... 42 1.6
24gb|AY937581.1| Uncultured eukaryote clone ENI40076.00252 18S rib... 42 1.6
25gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.6
26gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 42 1.6
27dbj|AP004975.1| Lotus japonicus genomic DNA, chromosome 5, clone... 42 1.6
28emb|AL772385.8| Mouse DNA sequence from clone RP23-340E12 on chr... 42 1.6
29gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.3
30ref|XM_511282.1| PREDICTED: Pan troglodytes similar to hypotheti... 40 6.3
31gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 6.3
32ref|NM_133611.1| Rattus norvegicus solute carrier family 2 (faci... 40 6.3
33ref|NM_012897.1| Rattus norvegicus adrenergic receptor kinase, b... 40 6.3
34gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 6.3
35gb|AC112081.8| Rattus norvegicus 7 BAC CH230-192B8 (Children's H... 40 6.3
36gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.3
37gb|AE009333.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 6.3
38gb|AE008281.1| Agrobacterium tumefaciens str. C58 linear chromos... 40 6.3
39gb|AC099704.7| Mus musculus chromosome 15, clone RP23-256A2, com... 40 6.3
40gb|AC131773.3| Mus musculus BAC clone RP24-308A19 from chromosom... 40 6.3
41gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.3
42emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.3
43emb|BX640434.1| Bordetella parapertussis strain 12822, complete ... 40 6.3
44emb|BX640420.1| Bordetella pertussis strain Tohama I, complete g... 40 6.3
45emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.3
46emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.3
47emb|AJ276414.1|AAN276414 Artemisia annua partial gASC23 gene for... 40 6.3
48gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 6.3
49ref|NM_001033633.1| Mus musculus solute carrier family 2 (facili... 40 6.3
50dbj|AK147341.1| Mus musculus adult male brain UNDEFINED_CELL_LIN... 40 6.3
51gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.3
52dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 40 6.3
53emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.3
54emb|AJ315643.1|RNO315643 Rattus norvegicus mRNA for proton myo-i... 40 6.3
55emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 6.3
56gb|AE017221.1| Thermus thermophilus HB27, complete genome 40 6.3
57gb|M87855.1|RATBARK2 Rattus norvegicus beta-adrenergic receptor ... 40 6.3 
>ref|XM_467091.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 404

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/67 (89%), Gaps = 4/67 (5%)
 Strand = Plus / Minus

                                                                       
Query: 159 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 217
           |||| |||||||||||||||   ||||||||||||||||||||||| |  ||||||||||
Sbjct: 226 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 170

                  
Query: 218 aaaaatt 224
           |||||||
Sbjct: 169 aaaaatt 163



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                       
Query: 24  tacaccgaaaatatacacaaaatcctctctctatataaccaaaa 67
           |||||| ||||||||||| ||||| || ||||||| ||||||||
Sbjct: 362 tacaccaaaaatatacac-aaatcttccctctatagaaccaaaa 320
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/67 (89%), Gaps = 4/67 (5%)
 Strand = Plus / Minus

                                                                            
Query: 159      ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 217
                |||| |||||||||||||||   ||||||||||||||||||||||| |  ||||||||||
Sbjct: 26356294 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 26356238

                       
Query: 218      aaaaatt 224
                |||||||
Sbjct: 26356237 aaaaatt 26356231



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 322      gcgctcgccaaggccaccagcgccgcgacgccggccgcgcgcgc 365
                |||| |||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 26356065 gcgcccgccaatgccacgagcgcggcgacgccggccgcgcgcgc 26356022



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                            
Query: 24       tacaccgaaaatatacacaaaatcctctctctatataaccaaaa 67
                |||||| ||||||||||| ||||| || ||||||| ||||||||
Sbjct: 26356430 tacaccaaaaatatacac-aaatcttccctctatagaaccaaaa 26356388
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>dbj|AP002485.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:P0491E01
          Length = 136150

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/67 (89%), Gaps = 4/67 (5%)
 Strand = Plus / Minus

                                                                         
Query: 159   ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 217
             |||| |||||||||||||||   ||||||||||||||||||||||| |  ||||||||||
Sbjct: 88646 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 88590

                    
Query: 218   aaaaatt 224
             |||||||
Sbjct: 88589 aaaaatt 88583



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 322   gcgctcgccaaggccaccagcgccgcgacgccggccgcgcgcgc 365
             |||| |||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 88417 gcgcccgccaatgccacgagcgcggcgacgccggccgcgcgcgc 88374



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                         
Query: 24    tacaccgaaaatatacacaaaatcctctctctatataaccaaaa 67
             |||||| ||||||||||| ||||| || ||||||| ||||||||
Sbjct: 88782 tacaccaaaaatatacac-aaatcttccctctatagaaccaaaa 88740
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>dbj|AK062922.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-H08, full
           insert sequence
          Length = 404

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 60/67 (89%), Gaps = 4/67 (5%)
 Strand = Plus / Minus

                                                                       
Query: 159 ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 217
           |||| |||||||||||||||   ||||||||||||||||||||||| |  ||||||||||
Sbjct: 226 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 170

                  
Query: 218 aaaaatt 224
           |||||||
Sbjct: 169 aaaaatt 163



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                       
Query: 24  tacaccgaaaatatacacaaaatcctctctctatataaccaaaa 67
           |||||| ||||||||||| ||||| || ||||||| ||||||||
Sbjct: 362 tacaccaaaaatatacac-aaatcttccctctatagaaccaaaa 320
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>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
          Length = 339972

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 82/94 (87%), Gaps = 7/94 (7%)
 Strand = Plus / Minus

                                                                         
Query: 159   ggacggacaaccaatgcatcatcgtacatcaagaatcgatcgatcg-tagtaccaccggt 217
             |||| |||||||||||||||   ||||||||||||||||||||||| |  ||||||||||
Sbjct: 79437 ggactgacaaccaatgcatc---gtacatcaagaatcgatcgatcgatcataccaccggt 79381

                                               
Query: 218   aaaaatt-aaatgacgacacgaaagaagaaaaaa 250
             ||||||| |||| |  ||||||||||| ||||||
Sbjct: 79380 aaaaatttaaataa--acacgaaagaaaaaaaaa 79349



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                         
Query: 322   gcgctcgccaaggccaccagcgccgcgacgccggccgcgcgcgc 365
             |||| |||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 79209 gcgcccgccaatgccacgagcgcggcgacgccggccgcgcgcgc 79166



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 39/44 (88%), Gaps = 1/44 (2%)
 Strand = Plus / Minus

                                                         
Query: 24    tacaccgaaaatatacacaaaatcctctctctatataaccaaaa 67
             |||||| ||||||||||| ||||| || ||||||| ||||||||
Sbjct: 79573 tacaccaaaaatatacac-aaatcttccctctatagaaccaaaa 79531
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 340     agcgccgcgacgccggccgcgc 361
               ||||||||||||||||||||||
Sbjct: 1929641 agcgccgcgacgccggccgcgc 1929662



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 338   ccagcgccgcgacgccggccgcgc 361
             ||||| ||||||||||||||||||
Sbjct: 65744 ccagccccgcgacgccggccgcgc 65721
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>gb|AC127300.3| Mus musculus BAC clone RP23-264J18 from chromosome 8, complete sequence
          Length = 178649

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 237    gaaagaagaaaaaagcagcagc 258
              ||||||||||||||||||||||
Sbjct: 126134 gaaagaagaaaaaagcagcagc 126113
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>dbj|AK086041.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched
            library, clone:D830048B13 product:hypothetical protein,
            full insert sequence
          Length = 3256

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 237  gaaagaagaaaaaagcagcagc 258
            ||||||||||||||||||||||
Sbjct: 1597 gaaagaagaaaaaagcagcagc 1576
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 333     ggccaccagcgccgcgacgccggcc 357
               ||||| |||||||||||||||||||
Sbjct: 4646203 ggccagcagcgccgcgacgccggcc 4646179
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 339     cagcgccgcgacgccggccgcgcgc 363
               |||||||||||||||||| ||||||
Sbjct: 4793254 cagcgccgcgacgccggcggcgcgc 4793278
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>emb|BX572595.1| Rhodopseudomonas palustris CGA009 complete genome; segment 3/16
          Length = 349260

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 339    cagcgccgcgacgccggccgcgcgc 363
              |||||||||||||||||| ||||||
Sbjct: 335414 cagcgccgcgacgccggcggcgcgc 335390
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>gb|AC092916.6| Homo sapiens 3 BAC RP11-615J4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 132182

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 31    aaaatatacacaaaatcctct 51
             |||||||||||||||||||||
Sbjct: 82570 aaaatatacacaaaatcctct 82550
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 339     cagcgccgcgacgccggccgcgcgc 363
               |||||||||||||||||| ||||||
Sbjct: 5066281 cagcgccgcgacgccggcggcgcgc 5066305
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>gb|AY938407.1| Uncultured eukaryote clone ENI47296.00339 18S ribosomal RNA gene,
           partial sequence
          Length = 576

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 aaaccaaccactacccgccga 136
           |||||||||||||||||||||
Sbjct: 49  aaaccaaccactacccgccga 29
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>gb|AY938380.1| Uncultured eukaryote clone ENI47296.00298 18S ribosomal RNA gene,
           partial sequence
          Length = 235

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 aaaccaaccactacccgccga 136
           |||||||||||||||||||||
Sbjct: 43  aaaccaaccactacccgccga 23
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>gb|AY938362.1| Uncultured eukaryote clone ENI47296.00256 18S ribosomal RNA gene,
           partial sequence
          Length = 589

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 aaaccaaccactacccgccga 136
           |||||||||||||||||||||
Sbjct: 49  aaaccaaccactacccgccga 29
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>gb|AY938336.1| Uncultured eukaryote clone ENI47296.00208 18S ribosomal RNA gene,
           partial sequence
          Length = 570

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 aaaccaaccactacccgccga 136
           |||||||||||||||||||||
Sbjct: 46  aaaccaaccactacccgccga 26
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>gb|AY938304.1| Uncultured eukaryote clone ENI47296.00151 18S ribosomal RNA gene,
           partial sequence
          Length = 589

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 aaaccaaccactacccgccga 136
           |||||||||||||||||||||
Sbjct: 49  aaaccaaccactacccgccga 29
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>gb|AY938212.1| Uncultured eukaryote clone ENI42482.00364 18S ribosomal RNA gene,
           partial sequence
          Length = 573

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 aaaccaaccactacccgccga 136
           |||||||||||||||||||||
Sbjct: 49  aaaccaaccactacccgccga 29
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>gb|AY938060.1| Uncultured eukaryote clone ENI42482.00172 18S ribosomal RNA gene,
           partial sequence
          Length = 545

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 aaaccaaccactacccgccga 136
           |||||||||||||||||||||
Sbjct: 49  aaaccaaccactacccgccga 29
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>gb|AY937894.1| Uncultured eukaryote clone ENI40076.00794 18S ribosomal RNA gene,
           partial sequence
          Length = 607

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 aaaccaaccactacccgccga 136
           |||||||||||||||||||||
Sbjct: 49  aaaccaaccactacccgccga 29
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>gb|AY937836.1| Uncultured eukaryote clone ENI40076.00722 18S ribosomal RNA gene,
           partial sequence
          Length = 605

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 aaaccaaccactacccgccga 136
           |||||||||||||||||||||
Sbjct: 45  aaaccaaccactacccgccga 25
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>gb|AY937612.1| Uncultured eukaryote clone ENI40076.00315 18S ribosomal RNA gene,
           partial sequence
          Length = 568

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 aaaccaaccactacccgccga 136
           |||||||||||||||||||||
Sbjct: 47  aaaccaaccactacccgccga 27
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>gb|AY937581.1| Uncultured eukaryote clone ENI40076.00252 18S ribosomal RNA gene,
           partial sequence
          Length = 491

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 116 aaaccaaccactacccgccga 136
           |||||||||||||||||||||
Sbjct: 44  aaaccaaccactacccgccga 24
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 345     cgcgacgccggccgcgcgcgc 365
               |||||||||||||||||||||
Sbjct: 1545329 cgcgacgccggccgcgcgcgc 1545309



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 344    ccgcgacgccggccgcgcgc 363
              ||||||||||||||||||||
Sbjct: 994651 ccgcgacgccggccgcgcgc 994632
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 339     cagcgccgcgacgccggccgc 359
               |||||||||||||||||||||
Sbjct: 2207300 cagcgccgcgacgccggccgc 2207280
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>dbj|AP004975.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT21J12, TM0158,
             complete sequence
          Length = 83377

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 103   cagaacatgcactaaaccaac 123
             |||||||||||||||||||||
Sbjct: 13126 cagaacatgcactaaaccaac 13146
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>emb|AL772385.8| Mouse DNA sequence from clone RP23-340E12 on chromosome 4, complete
              sequence
          Length = 220248

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 237    gaaagaagaaaaaagcagcag 257
              |||||||||||||||||||||
Sbjct: 115552 gaaagaagaaaaaagcagcag 115532
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 327     cgccaaggccaccagcgccg 346
               ||||||||||||||||||||
Sbjct: 3180066 cgccaaggccaccagcgccg 3180085
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>ref|XM_511282.1| PREDICTED: Pan troglodytes similar to hypothetical protein MGC29671
            (LOC454445), mRNA
          Length = 1965

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 271  ggaggacacagcatgcactggcct 294
            ||||||| ||||||||||||||||
Sbjct: 1087 ggaggacccagcatgcactggcct 1110
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 344     ccgcgacgccggccgcgcgc 363
               ||||||||||||||||||||
Sbjct: 3588260 ccgcgacgccggccgcgcgc 3588279
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>ref|NM_133611.1| Rattus norvegicus solute carrier family 2 (facilitated glucose
           transporter), member 13 (Slc2a13), mRNA
          Length = 2504

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 338 ccagcgccgcgacgccggccgcgc 361
           |||||||||||||| |||||||||
Sbjct: 463 ccagcgccgcgacggcggccgcgc 440
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>ref|NM_012897.1| Rattus norvegicus adrenergic receptor kinase, beta 2 (Adrbk2), mRNA
          Length = 2464

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 346 gcgacgccggccgcgcgcgc 365
           ||||||||||||||||||||
Sbjct: 67  gcgacgccggccgcgcgcgc 86
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 351    gccggccgcgcgcgctgtgg 370
              ||||||||||||||||||||
Sbjct: 595250 gccggccgcgcgcgctgtgg 595269
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>gb|AC112081.8| Rattus norvegicus 7 BAC CH230-192B8 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 150311

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 338    ccagcgccgcgacgccggccgcgc 361
              |||||||||||||| |||||||||
Sbjct: 123008 ccagcgccgcgacggcggccgcgc 122985
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 351     gccggccgcgcgcgctgtgg 370
               ||||||||||||||||||||
Sbjct: 3179554 gccggccgcgcgcgctgtgg 3179535
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>gb|AE009333.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 103 of
             187 of the complete sequence
          Length = 13898

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 372   tgcgctgctgctgtcggtca 391
             ||||||||||||||||||||
Sbjct: 10910 tgcgctgctgctgtcggtca 10891
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>gb|AE008281.1| Agrobacterium tumefaciens str. C58 linear chromosome, section 85 of
            187 of the complete sequence
          Length = 13620

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 372  tgcgctgctgctgtcggtca 391
            ||||||||||||||||||||
Sbjct: 4306 tgcgctgctgctgtcggtca 4325
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>gb|AC099704.7| Mus musculus chromosome 15, clone RP23-256A2, complete sequence
          Length = 204704

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 338   ccagcgccgcgacgccggccgcgc 361
             |||||||||||||| |||||||||
Sbjct: 58538 ccagcgccgcgacggcggccgcgc 58561
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>gb|AC131773.3| Mus musculus BAC clone RP24-308A19 from chromosome 15, complete
             sequence
          Length = 168423

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 338   ccagcgccgcgacgccggccgcgc 361
             |||||||||||||| |||||||||
Sbjct: 80844 ccagcgccgcgacggcggccgcgc 80821
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 351     gccggccgcgcgcgctgtgg 370
               ||||||||||||||||||||
Sbjct: 3544500 gccggccgcgcgcgctgtgg 3544481
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>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16
          Length = 348074

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    ggccaccagcgccgcgacgc 352
              ||||||||||||||||||||
Sbjct: 123689 ggccaccagcgccgcgacgc 123708
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>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14
          Length = 344805

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 333   ggccaccagcgccgcgacgc 352
             ||||||||||||||||||||
Sbjct: 76311 ggccaccagcgccgcgacgc 76330
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>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12
          Length = 348134

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 333    ggccaccagcgccgcgacgc 352
              ||||||||||||||||||||
Sbjct: 342460 ggccaccagcgccgcgacgc 342479
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>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16
          Length = 349746

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 339    cagcgccgcgacgccggccg 358
              ||||||||||||||||||||
Sbjct: 328224 cagcgccgcgacgccggccg 328205
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 351     gccggccgcgcgcgctgtgg 370
               ||||||||||||||||||||
Sbjct: 2909434 gccggccgcgcgcgctgtgg 2909415
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>emb|AJ276414.1|AAN276414 Artemisia annua partial gASC23 gene for putative sesquiterpene
           cyclase, exons 1-3
          Length = 788

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 catgcactaaaccaaccact 127
           ||||||||||||||||||||
Sbjct: 380 catgcactaaaccaaccact 399
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 351     gccggccgcgcgcgctgtgg 370
               ||||||||||||||||||||
Sbjct: 2160155 gccggccgcgcgcgctgtgg 2160136
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>ref|NM_001033633.1| Mus musculus solute carrier family 2 (facilitated glucose
           transporter), member 13 (Slc2a13), mRNA
          Length = 6535

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 338 ccagcgccgcgacgccggccgcgc 361
           |||||||||||||| |||||||||
Sbjct: 541 ccagcgccgcgacggcggccgcgc 518
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>dbj|AK147341.1| Mus musculus adult male brain UNDEFINED_CELL_LINE cDNA, RIKEN
           full-length enriched library, clone:M5C1016E12
           product:Proton myo-inositol transporter homolog [Rattus
           norvegicus], full insert sequence
          Length = 6535

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 338 ccagcgccgcgacgccggccgcgc 361
           |||||||||||||| |||||||||
Sbjct: 541 ccagcgccgcgacggcggccgcgc 518
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 342     cgccgcgacgccggccgcgc 361
               ||||||||||||||||||||
Sbjct: 1298300 cgccgcgacgccggccgcgc 1298319
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 304    aggaagacggcgaggcccgc 323
              ||||||||||||||||||||
Sbjct: 265171 aggaagacggcgaggcccgc 265152
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 333     ggccaccagcgccgcgacgccggc 356
               ||||| ||||||||||||||||||
Sbjct: 1123115 ggccagcagcgccgcgacgccggc 1123138
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>emb|AJ315643.1|RNO315643 Rattus norvegicus mRNA for proton myo-inositol symporter (Hmit
           gene)
          Length = 2504

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 338 ccagcgccgcgacgccggccgcgc 361
           |||||||||||||| |||||||||
Sbjct: 463 ccagcgccgcgacggcggccgcgc 440
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 306    gaagacggcgaggcccgcgc 325
              ||||||||||||||||||||
Sbjct: 891559 gaagacggcgaggcccgcgc 891540
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 304     aggaagacggcgaggcccgc 323
               ||||||||||||||||||||
Sbjct: 1625941 aggaagacggcgaggcccgc 1625960
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>gb|M87855.1|RATBARK2 Rattus norvegicus beta-adrenergic receptor kinase 2 (beta-ARK2)
           mRNA, complete cds
          Length = 2464

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 346 gcgacgccggccgcgcgcgc 365
           ||||||||||||||||||||
Sbjct: 67  gcgacgccggccgcgcgcgc 86


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,759,210
Number of Sequences: 3902068
Number of extensions: 4759210
Number of successful extensions: 99066
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96135
Number of HSP's gapped (non-prelim): 2921
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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