>EX7L_ANASP (Q8YW42) Probable exodeoxyribonuclease VII large subunit (EC|
           3.1.11.6) (Exonuclease VII large subunit)
          Length = 412

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 249 RVVPLHPQPVSVVSSPLGKLWG 314
           R +P+HPQ ++VV+SP    WG
Sbjct: 141 RSLPIHPQTIAVVTSPTAAAWG 162

>ARF5_ARATH (Q9ZPX1) Probable ADP-ribosylation factor At2g18390|
          Length = 185

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -3

Query: 111 GRIGNLVAVVASRRWKFIDCSRMLGDCGLLAG--WL 10
           G++ NL ++  SR WK + CS   G+ GLL G  WL
Sbjct: 139 GKVLNLESMDKSRHWKIVGCSAYTGE-GLLEGFDWL 173

>OCLN_MOUSE (Q61146) Occludin|
          Length = 521

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 13  PTS*QPTVTKHSATIDELPPPTSYYCYQVPNPTLYTSSAK 132
           P + +  V   SA   ++PPP S Y  +V +P  Y+S+ K
Sbjct: 289 PPNVEEWVKNVSAGTQDMPPPPSDYAERVDSPMAYSSNGK 328

>OCLN_RAT (Q6P6T5) Occludin|
          Length = 523

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 13  PTS*QPTVTKHSATIDELPPPTSYYCYQVPNPTLYTSSAK 132
           P + +  V   SA   ++PPP S Y  +V +P  Y+S+ K
Sbjct: 291 PPNVEEWVKNVSAGTQDMPPPPSDYAERVDSPMAYSSNGK 330

>LSM11_MOUSE (Q8BUV6) U7 snRNA-associated Sm-like protein LSm11|
          Length = 361

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 14/34 (41%), Positives = 20/34 (58%)
 Frame = +2

Query: 26  SPQSPSILLQSMNFHLLLATTATKFPILPYTHRP 127
           SP SP + + S +F  LLA  A + P +PY + P
Sbjct: 18  SPPSPRLDVSSYSFDPLLALYAPRLPPIPYPNAP 51

>OCLN_CANFA (Q28269) Occludin|
          Length = 521

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 13  PTS*QPTVTKHSATIDELPPPTSYYCYQVPNPTLYTSSAK 132
           P + +  V   SA   ++PPP S Y  +V +P  Y+S+ K
Sbjct: 290 PPNVEEWVKNVSAGTQDMPPPPSDYVERVDSPMAYSSNGK 329

>DTX2_HUMAN (Q86UW9) Protein deltex-2 (Deltex-2) (Deltex2) (hDTX2)|
          Length = 622

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 267 PQPVSVVSSPLGKLWGGCVLHQCVSGRFLG 356
           P PV+ + +P G     C  HQC+SG   G
Sbjct: 179 PYPVTTIIAPPGHTGVACSCHQCLSGSRTG 208

>PRLR_MELGA (Q91094) Prolactin receptor precursor (PRL-R) (TPRLR)|
          Length = 831

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 11/38 (28%), Positives = 21/38 (55%)
 Frame = -1

Query: 401 NIEPRKYSKREWEEFTEESTRNALMEHTATPEFAQWAA 288
           +++ +K  KR WE +   S R AL+ +  + + + W A
Sbjct: 585 DVQAKKAGKRSWESYCVASERKALLFNNESAKSSTWPA 622


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,383,971
Number of Sequences: 219361
Number of extensions: 964869
Number of successful extensions: 2887
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2887
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)