>ref|XM_469062.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1686

 Score =  119 bits (60), Expect = 8e-24
 Identities = 138/164 (84%)
 Strand = Plus / Minus

                                                                        
Query: 271  agccggtgagcgttgtcagcagcccattgggcaaactctggggtggctgtgtgctccatc 330
            ||||||||||| || |||||| |||||   |||||||||||||| || |||  |||||| 
Sbjct: 1574 agccggtgagcattatcagcaacccatctagcaaactctggggttgccgtgcactccata 1515

                                                                        
Query: 331  agtgcgtttctggtcgattcctcggtgaactcctcccattctctctttgagtacttccgt 390
            ||||| |||||||| |||| || |||||| || |||||||||  |||||| || |||| |
Sbjct: 1514 agtgcctttctggtggatttctgggtgaagtcatcccattcttcctttgaatatttcctt 1455

                                                        
Query: 391  ggttcgatgttgtggaaggtggagtagtagtcttcgtcttgatt 434
            |||| ||| ||||||||||||||||||| |||||| ||||||||
Sbjct: 1454 ggttggatattgtggaaggtggagtagtggtcttcatcttgatt 1411

>gb|AC120535.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0092N01,
              complete sequence
          Length = 161741

 Score =  119 bits (60), Expect = 8e-24
 Identities = 138/164 (84%)
 Strand = Plus / Plus

                                                                          
Query: 271    agccggtgagcgttgtcagcagcccattgggcaaactctggggtggctgtgtgctccatc 330
              ||||||||||| || |||||| |||||   |||||||||||||| || |||  |||||| 
Sbjct: 122225 agccggtgagcattatcagcaacccatctagcaaactctggggttgccgtgcactccata 122284

                                                                          
Query: 331    agtgcgtttctggtcgattcctcggtgaactcctcccattctctctttgagtacttccgt 390
              ||||| |||||||| |||| || |||||| || |||||||||  |||||| || |||| |
Sbjct: 122285 agtgcctttctggtggatttctgggtgaagtcatcccattcttcctttgaatatttcctt 122344

                                                          
Query: 391    ggttcgatgttgtggaaggtggagtagtagtcttcgtcttgatt 434
              |||| ||| ||||||||||||||||||| |||||| ||||||||
Sbjct: 122345 ggttggatattgtggaaggtggagtagtggtcttcatcttgatt 122388

>gb|AC138004.3| Oryza sativa chromosome 3 BAC OSJNBb0023J24 genomic sequence, complete
             sequence
          Length = 130193

 Score =  119 bits (60), Expect = 8e-24
 Identities = 138/164 (84%)
 Strand = Plus / Minus

                                                                         
Query: 271   agccggtgagcgttgtcagcagcccattgggcaaactctggggtggctgtgtgctccatc 330
             ||||||||||| || |||||| |||||   |||||||||||||| || |||  |||||| 
Sbjct: 76522 agccggtgagcattatcagcaacccatctagcaaactctggggttgccgtgcactccata 76463

                                                                         
Query: 331   agtgcgtttctggtcgattcctcggtgaactcctcccattctctctttgagtacttccgt 390
             ||||| |||||||| |||| || |||||| || |||||||||  |||||| || |||| |
Sbjct: 76462 agtgcctttctggtggatttctgggtgaagtcatcccattcttcctttgaatatttcctt 76403

                                                         
Query: 391   ggttcgatgttgtggaaggtggagtagtagtcttcgtcttgatt 434
             |||| ||| ||||||||||||||||||| |||||| ||||||||
Sbjct: 76402 ggttggatattgtggaaggtggagtagtggtcttcatcttgatt 76359

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  119 bits (60), Expect = 8e-24
 Identities = 138/164 (84%)
 Strand = Plus / Plus

                                                                            
Query: 271      agccggtgagcgttgtcagcagcccattgggcaaactctggggtggctgtgtgctccatc 330
                ||||||||||| || |||||| |||||   |||||||||||||| || |||  |||||| 
Sbjct: 25226186 agccggtgagcattatcagcaacccatctagcaaactctggggttgccgtgcactccata 25226245

                                                                            
Query: 331      agtgcgtttctggtcgattcctcggtgaactcctcccattctctctttgagtacttccgt 390
                ||||| |||||||| |||| || |||||| || |||||||||  |||||| || |||| |
Sbjct: 25226246 agtgcctttctggtggatttctgggtgaagtcatcccattcttcctttgaatatttcctt 25226305

                                                            
Query: 391      ggttcgatgttgtggaaggtggagtagtagtcttcgtcttgatt 434
                |||| ||| ||||||||||||||||||| |||||| ||||||||
Sbjct: 25226306 ggttggatattgtggaaggtggagtagtggtcttcatcttgatt 25226349

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  119 bits (60), Expect = 8e-24
 Identities = 138/164 (84%)
 Strand = Plus / Plus

                                                                            
Query: 271      agccggtgagcgttgtcagcagcccattgggcaaactctggggtggctgtgtgctccatc 330
                ||||||||||| || |||||| |||||   |||||||||||||| || |||  |||||| 
Sbjct: 25317558 agccggtgagcattatcagcaacccatctagcaaactctggggttgccgtgcactccata 25317617

                                                                            
Query: 331      agtgcgtttctggtcgattcctcggtgaactcctcccattctctctttgagtacttccgt 390
                ||||| |||||||| |||| || |||||| || |||||||||  |||||| || |||| |
Sbjct: 25317618 agtgcctttctggtggatttctgggtgaagtcatcccattcttcctttgaatatttcctt 25317677

                                                            
Query: 391      ggttcgatgttgtggaaggtggagtagtagtcttcgtcttgatt 434
                |||| ||| ||||||||||||||||||| |||||| ||||||||
Sbjct: 25317678 ggttggatattgtggaaggtggagtagtggtcttcatcttgatt 25317721

>dbj|AK066127.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052K14, full
            insert sequence
          Length = 2025

 Score =  119 bits (60), Expect = 8e-24
 Identities = 138/164 (84%)
 Strand = Plus / Minus

                                                                        
Query: 271  agccggtgagcgttgtcagcagcccattgggcaaactctggggtggctgtgtgctccatc 330
            ||||||||||| || |||||| |||||   |||||||||||||| || |||  |||||| 
Sbjct: 1592 agccggtgagcattatcagcaacccatctagcaaactctggggttgccgtgcactccata 1533

                                                                        
Query: 331  agtgcgtttctggtcgattcctcggtgaactcctcccattctctctttgagtacttccgt 390
            ||||| |||||||| |||| || |||||| || |||||||||  |||||| || |||| |
Sbjct: 1532 agtgcctttctggtggatttctgggtgaagtcatcccattcttcctttgaatatttcctt 1473

                                                        
Query: 391  ggttcgatgttgtggaaggtggagtagtagtcttcgtcttgatt 434
            |||| ||| ||||||||||||||||||| |||||| ||||||||
Sbjct: 1472 ggttggatattgtggaaggtggagtagtggtcttcatcttgatt 1429

>emb|AL356107.21| Human DNA sequence from clone RP11-484D5 on chromosome 13 Contains the
              gene for a novel protein similar to transforming growth
              factor beta-stimulated protein (TSC-22),  SMARCE1 (SWI/SNF
              related, matrix associated, actin dependent regulator of
              chromatin, subfamily e, member 1 ) pseudogene and a CpG
              island, complete sequence
          Length = 140499

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 179    tagaagcttttccgcctttct 199
              |||||||||||||||||||||
Sbjct: 109088 tagaagcttttccgcctttct 109068

>gb|DQ097842.1| Phanerochaete chrysosporium RP-78 Ty3/gypsy LTR retrotransposon
            PCretro4, complete sequence
          Length = 8420

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 234  cgactcgtcctcggacgagtc 254
            |||||||||||||||||||||
Sbjct: 1236 cgactcgtcctcggacgagtc 1256

>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 347     attcctcggtgaactcctcccattc 371
               |||||||||| ||||||||||||||
Sbjct: 2030651 attcctcggtaaactcctcccattc 2030675

>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 249     cgagtcgtcccgctccacccgcag 272
               ||||||| ||||||||||||||||
Sbjct: 1105293 cgagtcgccccgctccacccgcag 1105270

>emb|CR730855.2|CNS0GQVG Tetraodon nigroviridis full-length cDNA
          Length = 1455

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 tcggaagagcctgaggaggt 227
           ||||||||||||||||||||
Sbjct: 787 tcggaagagcctgaggaggt 768

>emb|CR726714.1|CNS0GNOG Tetraodon nigroviridis full-length cDNA
          Length = 1445

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 tcggaagagcctgaggaggt 227
           ||||||||||||||||||||
Sbjct: 785 tcggaagagcctgaggaggt 766

>emb|CR725788.1|CNS0GMYQ Tetraodon nigroviridis full-length cDNA
          Length = 1453

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 tcggaagagcctgaggaggt 227
           ||||||||||||||||||||
Sbjct: 789 tcggaagagcctgaggaggt 770

>emb|CR724559.2|CNS0GM0L Tetraodon nigroviridis full-length cDNA
          Length = 1461

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 208 tcggaagagcctgaggaggt 227
           ||||||||||||||||||||
Sbjct: 792 tcggaagagcctgaggaggt 773

>gb|AC129937.8| Mus musculus chromosome 1, clone RP23-285G23, complete sequence
          Length = 176435

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    ccacagtcaccaagcattct 48
             ||||||||||||||||||||
Sbjct: 49637 ccacagtcaccaagcattct 49618

>gb|AC093522.4| Homo sapiens chromosome 16 clone RP11-172I18, complete sequence
          Length = 162017

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 172   aacagactagaagcttttcc 191
             ||||||||||||||||||||
Sbjct: 44497 aacagactagaagcttttcc 44478

>gb|AC005774.1|AC005774 Homo sapiens chromosome 16, BAC clone 26O3 (LANL), complete sequence
          Length = 164538

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   aacagactagaagcttttcc 191
             ||||||||||||||||||||
Sbjct: 10473 aacagactagaagcttttcc 10492

>emb|BX470153.3| Mouse DNA sequence from clone RP24-363D14 on chromosome 4, complete
             sequence
          Length = 34051

 Score = 40.1 bits (20), Expect = 6.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 298   tgggcaaactctggggtggctgtgtgct 325
             |||||| | |||||||||||||||||||
Sbjct: 20513 tgggcacagtctggggtggctgtgtgct 20540


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,877,780
Number of Sequences: 3902068
Number of extensions: 2877780
Number of successful extensions: 55613
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 55526
Number of HSP's gapped (non-prelim): 87
length of query: 458
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 436
effective length of database: 17,147,199,772
effective search space: 7476179100592
effective search space used: 7476179100592
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)