Clone Name | rbart31d10 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009125.1| Triticum aestivum clone wl1n.pk0018.c4:fis, full insert mRNA sequence Length = 847 Score = 739 bits (373), Expect = 0.0 Identities = 478/511 (93%), Gaps = 4/511 (0%) Strand = Plus / Minus Query: 1 attccatgaaacaactttcgtattcgtcaccttaaactctggcaggttccatcccataa- 59 ||||||||||||| ||| ||||||| |||||||||||||||||| ||||||||| |||| Sbjct: 802 attccatgaaacagctt-cgtattcttcaccttaaactctggcaagttccatccgataaa 744 Query: 60 --tgaagaaaaatatcagttcccaagcatcagatagacaggtacaacagaccatgttaac 117 ||||||||||||||||| ||||||||||| |||||| || ||||||||||||| |||| Sbjct: 743 aatgaagaaaaatatcagtccccaagcatcaaatagactggcacaacagaccatgctaac 684 Query: 118 agtttacacggttacagtggcttcaatctcttgcaatctgagggtaacagctcgcttgtg 177 ||||||||| |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 683 agtttacacagttacagtggcttcgacctcttgcagtctgagggtaacagctcgcttgtg 624 Query: 178 cgcttctagcccttcgacctctgccatctttgcgacgtagggacccagccttctcagccc 237 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 623 cgcttctagcccttcgacttctgccatctttgcgacgtaggggcccagccttctcagccc 564 Query: 238 ttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccgct 297 |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 563 ttcttcagtcagggattgaacagtgatgtacttgaggaaagagttcagcgacacaccgct 504 Query: 298 gtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcgcc 357 |||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| || Sbjct: 503 gtacatcctcgcgtaaccgtaggttgggaggacgtggttcgtcccactggcatagtcacc 444 Query: 358 cacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcgatgagctcctc 417 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 443 cacgctctcgggggtccattgtcccaagaaaactgaccctgcgttctcgatgagctcctc 384 Query: 418 ccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacgtatttgagaa 477 ||||||||| || |||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 383 ccattgctcagcatcctttacgttgatgatcaaatgctcaggagcatacatatttgagaa 324 Query: 478 tgataatgcctcaaccatatctctggcaaac 508 |||||||||||||||||||||||||||||| Sbjct: 323 cgataatgcctcaaccatatctctggcaaac 293
>gb|BT008990.1| Triticum aestivum clone wdk2c.pk010.e4:fis, full insert mRNA sequence Length = 1710 Score = 739 bits (373), Expect = 0.0 Identities = 478/511 (93%), Gaps = 4/511 (0%) Strand = Plus / Minus Query: 1 attccatgaaacaactttcgtattcgtcaccttaaactctggcaggttccatcccataa- 59 ||||||||||||| ||| ||||||| |||||||||||||||||| ||||||||| |||| Sbjct: 1664 attccatgaaacagctt-cgtattcttcaccttaaactctggcaagttccatccgataaa 1606 Query: 60 --tgaagaaaaatatcagttcccaagcatcagatagacaggtacaacagaccatgttaac 117 ||||||||||||||||| ||||||||||| |||||| || ||||||||||||| |||| Sbjct: 1605 aatgaagaaaaatatcagtccccaagcatcaaatagactggcacaacagaccatgctaac 1546 Query: 118 agtttacacggttacagtggcttcaatctcttgcaatctgagggtaacagctcgcttgtg 177 ||||||||| |||||||||||||| | |||||||| |||||||||||||||||||||||| Sbjct: 1545 agtttacacagttacagtggcttcgacctcttgcagtctgagggtaacagctcgcttgtg 1486 Query: 178 cgcttctagcccttcgacctctgccatctttgcgacgtagggacccagccttctcagccc 237 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| Sbjct: 1485 cgcttctagcccttcgacttctgccatctttgcgacgtaggggcccagccttctcagccc 1426 Query: 238 ttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccgct 297 |||||| |||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 1425 ttcttcagtcagggattgaacagtgatgtacttgaggaaagagttcagcgacacaccgct 1366 Query: 298 gtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcgcc 357 |||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| || Sbjct: 1365 gtacatcctcgcgtaaccgtaggttgggaggacgtggttcgtcccactggcatagtcacc 1306 Query: 358 cacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcgatgagctcctc 417 |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| Sbjct: 1305 cacgctctcgggggtccattgtcccaagaaaactgaccctgcgttctcgatgagctcctc 1246 Query: 418 ccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacgtatttgagaa 477 ||||||||| || |||||||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 1245 ccattgctcagcatcctttacgttgatgatcaaatgctcaggagcatacatatttgagaa 1186 Query: 478 tgataatgcctcaaccatatctctggcaaac 508 |||||||||||||||||||||||||||||| Sbjct: 1185 cgataatgcctcaaccatatctctggcaaac 1155
>gb|BT009131.1| Triticum aestivum clone wl1n.pk0034.d11:fis, full insert mRNA sequence Length = 740 Score = 365 bits (184), Expect = 9e-98 Identities = 325/372 (87%) Strand = Plus / Minus Query: 128 gttacagtggcttcaatctcttgcaatctgagggtaacagctcgcttgtgcgcttctagc 187 |||||| |||| |||| |||||||| || |||||||| |||| ||||||||| |||||| Sbjct: 514 gttacattggcctcaacctcttgcagcctaagggtaacggctctcttgtgcgcctctagc 455 Query: 188 ccttcgacctctgccatctttgcgacgtagggacccagccttctcagcccttcttcggtc 247 || || || || |||||||| |||||||| || |||||| ||||||||||||| || || Sbjct: 454 ccctccacttcggccatcttcgcgacgtacggccccagctttctcagcccttcctctgtt 395 Query: 248 aaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccgctgtacatcctc 307 | |||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 394 agggattggacagtgatgtatttgaggaaagagttcagcgatacaccgctgtacatcctt 335 Query: 308 gcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcgcccacgctctcg 367 |||||||||||||| || ||||||||||||||||| || || || |||||||||||||| Sbjct: 334 gcgtaaccataggtcggaaggacatggttcgtcccgctcgcataatcgcccacgctctct 275 Query: 368 ggggtccattgtcccaggaaaactgaccctgcattctcgatgagctcctcccattgctcg 427 ||||||||||| |||| ||||||||||||||| || ||||||| ||||||||| ||||| Sbjct: 274 ggggtccattggcccaagaaaactgaccctgcgttttcgatgaactcctcccactgctca 215 Query: 428 gcttcctttacattgatgatcaaatgctcaggagcatacgtatttgagaatgataatgcc 487 || |||||||| |||||||||||||||||||| |||||| |||||||||||||| ||| Sbjct: 214 gcatcctttacgttgatgatcaaatgctcaggggcatacagatttgagaatgatatcgcc 155 Query: 488 tcaaccatatct 499 |||||||||||| Sbjct: 154 tcaaccatatct 143
>gb|AY109136.1| Zea mays PCO067414 mRNA sequence Length = 2011 Score = 365 bits (184), Expect = 9e-98 Identities = 325/372 (87%) Strand = Plus / Minus Query: 128 gttacagtggcttcaatctcttgcaatctgagggtaacagctcgcttgtgcgcttctagc 187 |||||| |||| |||| |||||||| || |||||||| |||| ||||||||| |||||| Sbjct: 1718 gttacattggcctcaacctcttgcagcctaagggtaacggctctcttgtgcgcctctagc 1659 Query: 188 ccttcgacctctgccatctttgcgacgtagggacccagccttctcagcccttcttcggtc 247 || || || || |||||||| |||||||| || |||||| ||||||||||||| || || Sbjct: 1658 ccctccacttcggccatcttcgcgacgtacggccccagctttctcagcccttcctctgtt 1599 Query: 248 aaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccgctgtacatcctc 307 | |||||| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| Sbjct: 1598 agggattggacagtgatgtatttgaggaaagagttcagcgatacaccgctgtacatcctt 1539 Query: 308 gcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcgcccacgctctcg 367 |||||||||||||| || ||||||||||||||||| || || || |||||||||||||| Sbjct: 1538 gcgtaaccataggtcggaaggacatggttcgtcccgctcgcataatcgcccacgctctct 1479 Query: 368 ggggtccattgtcccaggaaaactgaccctgcattctcgatgagctcctcccattgctcg 427 ||||||||||| |||| ||||||||||||||| || ||||||| ||||||||| ||||| Sbjct: 1478 ggggtccattggcccaagaaaactgaccctgcgttttcgatgaactcctcccactgctca 1419 Query: 428 gcttcctttacattgatgatcaaatgctcaggagcatacgtatttgagaatgataatgcc 487 || |||||||| |||||||||||||||||||| |||||| |||||||||||||| ||| Sbjct: 1418 gcatcctttacgttgatgatcaaatgctcaggggcatacagatttgagaatgatatcgcc 1359 Query: 488 tcaaccatatct 499 |||||||||||| Sbjct: 1358 tcaaccatatct 1347
>ref|NM_188636.1| Oryza sativa (japonica cultivar-group), Ozsa8239 predicted mRNA Length = 1380 Score = 329 bits (166), Expect = 5e-87 Identities = 322/374 (86%) Strand = Plus / Minus Query: 122 tacacggttacagtggcttcaatctcttgcaatctgagggtaacagctcgcttgtgcgct 181 |||||||||||||||||||| || || || | ||||||||||||||||| |||| || Sbjct: 1379 tacacggttacagtggcttcgatgtcctgaagtctgagggtaacagctcttctgtgagcc 1320 Query: 182 tctagcccttcgacctctgccatctttgcgacgtagggacccagccttctcagcccttct 241 ||||| |||||||| || ||||||||||| || | |||||||| ||||||| |||||| Sbjct: 1319 tctagtccttcgacttcagccatctttgccacatgcggacccagacttctcaacccttcc 1260 Query: 242 tcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccgctgtac 301 || | |||||| || ||||| |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 1259 tctgacaaggactggacagtgatgtacttgaggaatgagttcagtgacacgccgctatac 1200 Query: 302 atcctcgcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcgcccacg 361 ||||| ||||||||||||||||| ||||||||||| || || || || |||||||||||| Sbjct: 1199 atccttgcgtaaccataggttggaaggacatggtttgtgccgcttgcatagtcgcccacg 1140 Query: 362 ctctcgggggtccattgtcccaggaaaactgaccctgcattctcgatgagctcctcccat 421 ||||| |||||||||||||||| ||| || |||||||||||||||| || |||||||| Sbjct: 1139 ctctccggggtccattgtcccaagaagaccgaccctgcattctcgacaagatcctcccac 1080 Query: 422 tgctcggcttcctttacattgatgatcaaatgctcaggagcatacgtatttgagaatgat 481 || || || ||||||||||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 1079 tgttcagcatcctttacattgatgatcaaatgctcaggggcatacatattggagaatgaa 1020 Query: 482 aatgcctcaaccat 495 | |||||||||||| Sbjct: 1019 attgcctcaaccat 1006
>dbj|AK104113.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-H02, full insert sequence Length = 1021 Score = 329 bits (166), Expect = 5e-87 Identities = 322/374 (86%) Strand = Plus / Minus Query: 122 tacacggttacagtggcttcaatctcttgcaatctgagggtaacagctcgcttgtgcgct 181 |||||||||||||||||||| || || || | ||||||||||||||||| |||| || Sbjct: 769 tacacggttacagtggcttcgatgtcctgaagtctgagggtaacagctcttctgtgagcc 710 Query: 182 tctagcccttcgacctctgccatctttgcgacgtagggacccagccttctcagcccttct 241 ||||| |||||||| || ||||||||||| || | |||||||| ||||||| |||||| Sbjct: 709 tctagtccttcgacttcagccatctttgccacatgcggacccagacttctcaacccttcc 650 Query: 242 tcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccgctgtac 301 || | |||||| || ||||| |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 649 tctgacaaggactggacagtgatgtacttgaggaatgagttcagtgacacgccgctatac 590 Query: 302 atcctcgcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcgcccacg 361 ||||| ||||||||||||||||| ||||||||||| || || || || |||||||||||| Sbjct: 589 atccttgcgtaaccataggttggaaggacatggtttgtgccgcttgcatagtcgcccacg 530 Query: 362 ctctcgggggtccattgtcccaggaaaactgaccctgcattctcgatgagctcctcccat 421 ||||| |||||||||||||||| ||| || |||||||||||||||| || |||||||| Sbjct: 529 ctctccggggtccattgtcccaagaagaccgaccctgcattctcgacaagatcctcccac 470 Query: 422 tgctcggcttcctttacattgatgatcaaatgctcaggagcatacgtatttgagaatgat 481 || || || ||||||||||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 469 tgttcagcatcctttacattgatgatcaaatgctcaggggcatacatattggagaatgaa 410 Query: 482 aatgcctcaaccat 495 | |||||||||||| Sbjct: 409 attgcctcaaccat 396
>dbj|AK069972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037L20, full insert sequence Length = 1777 Score = 329 bits (166), Expect = 5e-87 Identities = 322/374 (86%) Strand = Plus / Minus Query: 122 tacacggttacagtggcttcaatctcttgcaatctgagggtaacagctcgcttgtgcgct 181 |||||||||||||||||||| || || || | ||||||||||||||||| |||| || Sbjct: 1517 tacacggttacagtggcttcgatgtcctgaagtctgagggtaacagctcttctgtgagcc 1458 Query: 182 tctagcccttcgacctctgccatctttgcgacgtagggacccagccttctcagcccttct 241 ||||| |||||||| || ||||||||||| || | |||||||| ||||||| |||||| Sbjct: 1457 tctagtccttcgacttcagccatctttgccacatgcggacccagacttctcaacccttcc 1398 Query: 242 tcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccgctgtac 301 || | |||||| || ||||| |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 1397 tctgacaaggactggacagtgatgtacttgaggaatgagttcagtgacacgccgctatac 1338 Query: 302 atcctcgcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcgcccacg 361 ||||| ||||||||||||||||| ||||||||||| || || || || |||||||||||| Sbjct: 1337 atccttgcgtaaccataggttggaaggacatggtttgtgccgcttgcatagtcgcccacg 1278 Query: 362 ctctcgggggtccattgtcccaggaaaactgaccctgcattctcgatgagctcctcccat 421 ||||| |||||||||||||||| ||| || |||||||||||||||| || |||||||| Sbjct: 1277 ctctccggggtccattgtcccaagaagaccgaccctgcattctcgacaagatcctcccac 1218 Query: 422 tgctcggcttcctttacattgatgatcaaatgctcaggagcatacgtatttgagaatgat 481 || || || ||||||||||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 1217 tgttcagcatcctttacattgatgatcaaatgctcaggggcatacatattggagaatgaa 1158 Query: 482 aatgcctcaaccat 495 | |||||||||||| Sbjct: 1157 attgcctcaaccat 1144
>dbj|AK061778.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D09, full insert sequence Length = 1021 Score = 329 bits (166), Expect = 5e-87 Identities = 322/374 (86%) Strand = Plus / Minus Query: 122 tacacggttacagtggcttcaatctcttgcaatctgagggtaacagctcgcttgtgcgct 181 |||||||||||||||||||| || || || | ||||||||||||||||| |||| || Sbjct: 769 tacacggttacagtggcttcgatgtcctgaagtctgagggtaacagctcttctgtgagcc 710 Query: 182 tctagcccttcgacctctgccatctttgcgacgtagggacccagccttctcagcccttct 241 ||||| |||||||| || ||||||||||| || | |||||||| ||||||| |||||| Sbjct: 709 tctagtccttcgacttcagccatctttgccacatgcggacccagacttctcaacccttcc 650 Query: 242 tcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccgctgtac 301 || | |||||| || ||||| |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 649 tctgacaaggactggacagtgatgtacttgaggaatgagttcagtgacacgccgctatac 590 Query: 302 atcctcgcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcgcccacg 361 ||||| ||||||||||||||||| ||||||||||| || || || || |||||||||||| Sbjct: 589 atccttgcgtaaccataggttggaaggacatggtttgtgccgcttgcatagtcgcccacg 530 Query: 362 ctctcgggggtccattgtcccaggaaaactgaccctgcattctcgatgagctcctcccat 421 ||||| |||||||||||||||| ||| || |||||||||||||||| || |||||||| Sbjct: 529 ctctccggggtccattgtcccaagaagaccgaccctgcattctcgacaagatcctcccac 470 Query: 422 tgctcggcttcctttacattgatgatcaaatgctcaggagcatacgtatttgagaatgat 481 || || || ||||||||||||||||||||||||||||| |||||| |||| |||||||| Sbjct: 469 tgttcagcatcctttacattgatgatcaaatgctcaggggcatacatattggagaatgaa 410 Query: 482 aatgcctcaaccat 495 | |||||||||||| Sbjct: 409 attgcctcaaccat 396
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 232 bits (117), Expect = 9e-58 Identities = 237/277 (85%) Strand = Plus / Minus Query: 122 tacacggttacagtggcttcaatctcttgcaatctgagggtaacagctcgcttgtgcgct 181 |||||||||||||||||||| || || || | ||||||||||||||||| |||| || Sbjct: 7350844 tacacggttacagtggcttcgatgtcctgaagtctgagggtaacagctcttctgtgagcc 7350785 Query: 182 tctagcccttcgacctctgccatctttgcgacgtagggacccagccttctcagcccttct 241 ||||| |||||||| || ||||||||||| || | |||||||| ||||||| |||||| Sbjct: 7350784 tctagtccttcgacttcagccatctttgccacatgcggacccagacttctcaacccttcc 7350725 Query: 242 tcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccgctgtac 301 || | |||||| || ||||| |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 7350724 tctgacaaggactggacagtgatgtacttgaggaatgagttcagtgacacgccgctatac 7350665 Query: 302 atcctcgcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcgcccacg 361 ||||| ||||||||||||||||| ||||||||||| || || || || |||||||||||| Sbjct: 7350664 atccttgcgtaaccataggttggaaggacatggtttgtgccgcttgcatagtcgcccacg 7350605 Query: 362 ctctcgggggtccattgtcccaggaaaactgaccctg 398 ||||| |||||||||||||||| ||| || ||||||| Sbjct: 7350604 ctctccggggtccattgtcccaagaagaccgaccctg 7350568 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 395 cctgcattctcgatgagctcctcccattgctcggcttcctttacattgatgatcaaatgc 454 ||||||||||||| || |||||||| || || || |||||||||||||||||||||||| Sbjct: 7350483 cctgcattctcgacaagatcctcccactgttcagcatcctttacattgatgatcaaatgc 7350424 Query: 455 tcaggagcatacgtatttgagaatga 480 ||||| |||||| |||| |||||||| Sbjct: 7350423 tcaggggcatacatattggagaatga 7350398
>dbj|AP002481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0702F03 Length = 141111 Score = 232 bits (117), Expect = 9e-58 Identities = 237/277 (85%) Strand = Plus / Minus Query: 122 tacacggttacagtggcttcaatctcttgcaatctgagggtaacagctcgcttgtgcgct 181 |||||||||||||||||||| || || || | ||||||||||||||||| |||| || Sbjct: 11872 tacacggttacagtggcttcgatgtcctgaagtctgagggtaacagctcttctgtgagcc 11813 Query: 182 tctagcccttcgacctctgccatctttgcgacgtagggacccagccttctcagcccttct 241 ||||| |||||||| || ||||||||||| || | |||||||| ||||||| |||||| Sbjct: 11812 tctagtccttcgacttcagccatctttgccacatgcggacccagacttctcaacccttcc 11753 Query: 242 tcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccgctgtac 301 || | |||||| || ||||| |||||||||||||| |||||||| ||||| ||||| ||| Sbjct: 11752 tctgacaaggactggacagtgatgtacttgaggaatgagttcagtgacacgccgctatac 11693 Query: 302 atcctcgcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcgcccacg 361 ||||| ||||||||||||||||| ||||||||||| || || || || |||||||||||| Sbjct: 11692 atccttgcgtaaccataggttggaaggacatggtttgtgccgcttgcatagtcgcccacg 11633 Query: 362 ctctcgggggtccattgtcccaggaaaactgaccctg 398 ||||| |||||||||||||||| ||| || ||||||| Sbjct: 11632 ctctccggggtccattgtcccaagaagaccgaccctg 11596 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 395 cctgcattctcgatgagctcctcccattgctcggcttcctttacattgatgatcaaatgc 454 ||||||||||||| || |||||||| || || || |||||||||||||||||||||||| Sbjct: 11511 cctgcattctcgacaagatcctcccactgttcagcatcctttacattgatgatcaaatgc 11452 Query: 455 tcaggagcatacgtatttgagaatga 480 ||||| |||||| |||| |||||||| Sbjct: 11451 tcaggggcatacatattggagaatga 11426
>gb|AF023141.1|AF023141 Thlaspi goesingense histidinol dehydrogenase (THD1) mRNA, partial cds Length = 1580 Score = 145 bits (73), Expect = 2e-31 Identities = 217/265 (81%) Strand = Plus / Minus Query: 236 ccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccg 295 ||||| || ||||| ||||| ||||| ||| ||||||||||||||| || || || || Sbjct: 1281 ccttcctctgtcaaagattgtacagtcatgaacttgaggaaagagtctagagagacgcca 1222 Query: 296 ctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcg 355 ||||||||| |||| || || || ||||| || || ||||| ||||| || ||||| || Sbjct: 1221 ctgtacatcttcgcatatccgtatgttggaagcacgtggtttgtcccgctcgcgtaatca 1162 Query: 356 cccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcgatgagctcc 415 || |||||||| || |||||| | || |||||||| || |||||||||||||| || || Sbjct: 1161 ccaacgctctctggcgtccatggccctaggaaaaccgaacctgcattctcgatcagtccc 1102 Query: 416 tcccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacgtatttgag 475 ||||||| ||| || || || ||||||||||||| |||||| || |||||| ||||||| Sbjct: 1101 tcccatttctcagcatctttgacattgatgatcagatgctcgggtgcatacagatttgag 1042 Query: 476 aatgataatgcctcaaccatatctc 500 ||||||| |||||||| |||||||| Sbjct: 1041 aatgatattgcctcaatcatatctc 1017
>ref|NM_180929.1| Arabidopsis thaliana ATHDH (HISTIDINOL DEHYDROGENASE) AT5G63890 (ATHDH) transcript variant AT5G63890.1 mRNA, complete cds Length = 1609 Score = 97.6 bits (49), Expect = 3e-17 Identities = 217/273 (79%) Strand = Plus / Minus Query: 228 ttctcagcccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcg 287 ||||||| ||||| || ||||| ||||| ||||| ||| |||| |||||||||| || | Sbjct: 1396 ttctcagaccttcctctgtcaaagattgtacagtcatgaactttaggaaagagtcgagag 1337 Query: 288 acacaccgctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactgg 347 | || || |||||||| || || || ||||| ||||| || || ||||| ||||| || | Sbjct: 1336 agacgccactgtacattcttgcatatccatatgttggaagaacgtggtttgtcccgctcg 1277 Query: 348 cgtagtcgcccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcga 407 | || || || || ||||| || |||||| |||| | |||||| || ||||| ||||| | Sbjct: 1276 cataatccccaacactctctggagtccatggtcctatgaaaaccgagcctgcgttctcaa 1217 Query: 408 tgagctcctcccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacg 467 | || ||||||||| ||| || || || ||||||||||||||||| || || ||||| Sbjct: 1216 tcagtccctcccatttctcagcgtctttgacattgatgatcaaatgttcgggtgcatata 1157 Query: 468 tatttgagaatgataatgcctcaaccatatctc 500 ||||||||| |||| |||||||| |||||||| Sbjct: 1156 gatttgagaaagatattgcctcaatcatatctc 1124
>ref|NM_125784.2| Arabidopsis thaliana ATHDH (HISTIDINOL DEHYDROGENASE) AT5G63890 (ATHDH) transcript variant AT5G63890.2 mRNA, complete cds Length = 1661 Score = 97.6 bits (49), Expect = 3e-17 Identities = 217/273 (79%) Strand = Plus / Minus Query: 228 ttctcagcccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcg 287 ||||||| ||||| || ||||| ||||| ||||| ||| |||| |||||||||| || | Sbjct: 1385 ttctcagaccttcctctgtcaaagattgtacagtcatgaactttaggaaagagtcgagag 1326 Query: 288 acacaccgctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactgg 347 | || || |||||||| || || || ||||| ||||| || || ||||| ||||| || | Sbjct: 1325 agacgccactgtacattcttgcatatccatatgttggaagaacgtggtttgtcccgctcg 1266 Query: 348 cgtagtcgcccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcga 407 | || || || || ||||| || |||||| |||| | |||||| || ||||| ||||| | Sbjct: 1265 cataatccccaacactctctggagtccatggtcctatgaaaaccgagcctgcgttctcaa 1206 Query: 408 tgagctcctcccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacg 467 | || ||||||||| ||| || || || ||||||||||||||||| || || ||||| Sbjct: 1205 tcagtccctcccatttctcagcgtctttgacattgatgatcaaatgttcgggtgcatata 1146 Query: 468 tatttgagaatgataatgcctcaaccatatctc 500 ||||||||| |||| |||||||| |||||||| Sbjct: 1145 gatttgagaaagatattgcctcaatcatatctc 1113
>gb|AY143900.1| Arabidopsis thaliana At5g63890/MGI19_9 mRNA, complete cds Length = 1401 Score = 97.6 bits (49), Expect = 3e-17 Identities = 217/273 (79%) Strand = Plus / Minus Query: 228 ttctcagcccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcg 287 ||||||| ||||| || ||||| ||||| ||||| ||| |||| |||||||||| || | Sbjct: 1294 ttctcagaccttcctctgtcaaagattgtacagtcatgaactttaggaaagagtcgagag 1235 Query: 288 acacaccgctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactgg 347 | || || |||||||| || || || ||||| ||||| || || ||||| ||||| || | Sbjct: 1234 agacgccactgtacattcttgcatatccatatgttggaagaacgtggtttgtcccgctcg 1175 Query: 348 cgtagtcgcccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcga 407 | || || || || ||||| || |||||| |||| | |||||| || ||||| ||||| | Sbjct: 1174 cataatccccaacactctctggagtccatggtcctatgaaaaccgagcctgcgttctcaa 1115 Query: 408 tgagctcctcccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacg 467 | || ||||||||| ||| || || || ||||||||||||||||| || || ||||| Sbjct: 1114 tcagtccctcccatttctcagcgtctttgacattgatgatcaaatgttcgggtgcatata 1055 Query: 468 tatttgagaatgataatgcctcaaccatatctc 500 ||||||||| |||| |||||||| |||||||| Sbjct: 1054 gatttgagaaagatattgcctcaatcatatctc 1022
>gb|AY039881.1| Arabidopsis thaliana AT5g63890/MGI19_9 mRNA, complete cds Length = 1598 Score = 97.6 bits (49), Expect = 3e-17 Identities = 217/273 (79%) Strand = Plus / Minus Query: 228 ttctcagcccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcg 287 ||||||| ||||| || ||||| ||||| ||||| ||| |||| |||||||||| || | Sbjct: 1385 ttctcagaccttcctctgtcaaagattgtacagtcatgaactttaggaaagagtcgagag 1326 Query: 288 acacaccgctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactgg 347 | || || |||||||| || || || ||||| ||||| || || ||||| ||||| || | Sbjct: 1325 agacgccactgtacattcttgcatatccatatgttggaagaacgtggtttgtcccgctcg 1266 Query: 348 cgtagtcgcccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcga 407 | || || || || ||||| || |||||| |||| | |||||| || ||||| ||||| | Sbjct: 1265 cataatccccaacactctctggagtccatggtcctatgaaaaccgagcctgcgttctcaa 1206 Query: 408 tgagctcctcccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacg 467 | || ||||||||| ||| || || || ||||||||||||||||| || || ||||| Sbjct: 1205 tcagtccctcccatttctcagcgtctttgacattgatgatcaaatgttcgggtgcatata 1146 Query: 468 tatttgagaatgataatgcctcaaccatatctc 500 ||||||||| |||| |||||||| |||||||| Sbjct: 1145 gatttgagaaagatattgcctcaatcatatctc 1113
>emb|BX830420.1|CNS0A1B3 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB7ZA06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1586 Score = 97.6 bits (49), Expect = 3e-17 Identities = 217/273 (79%) Strand = Plus / Minus Query: 228 ttctcagcccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcg 287 ||||||| ||||| || ||||| ||||| ||||| ||| |||| |||||||||| || | Sbjct: 1353 ttctcagaccttcctctgtcaaagattgtacagtcatgaactttaggaaagagtcgagag 1294 Query: 288 acacaccgctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactgg 347 | || || |||||||| || || || ||||| ||||| || || ||||| ||||| || | Sbjct: 1293 agacgccactgtacattcttgcatatccatatgttggaagaacgtggtttgtcccgctcg 1234 Query: 348 cgtagtcgcccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcga 407 | || || || || ||||| || |||||| |||| | |||||| || ||||| ||||| | Sbjct: 1233 cataatccccaacactctctggagtccatggtcctatgaaaaccgagcctgcgttctcaa 1174 Query: 408 tgagctcctcccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacg 467 | || ||||||||| ||| || || || ||||||||||||||||| || || ||||| Sbjct: 1173 tcagtccctcccatttctcagcgtctttgacattgatgatcaaatgttcgggtgcatata 1114 Query: 468 tatttgagaatgataatgcctcaaccatatctc 500 ||||||||| |||| |||||||| |||||||| Sbjct: 1113 gatttgagaaagatattgcctcaatcatatctc 1081
>gb|AY087987.1| Arabidopsis thaliana clone 40175 mRNA, complete sequence Length = 1609 Score = 97.6 bits (49), Expect = 3e-17 Identities = 217/273 (79%) Strand = Plus / Minus Query: 228 ttctcagcccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcg 287 ||||||| ||||| || ||||| ||||| ||||| ||| |||| |||||||||| || | Sbjct: 1396 ttctcagaccttcctctgtcaaagattgtacagtcatgaactttaggaaagagtcgagag 1337 Query: 288 acacaccgctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactgg 347 | || || |||||||| || || || ||||| ||||| || || ||||| ||||| || | Sbjct: 1336 agacgccactgtacattcttgcatatccatatgttggaagaacgtggtttgtcccgctcg 1277 Query: 348 cgtagtcgcccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcga 407 | || || || || ||||| || |||||| |||| | |||||| || ||||| ||||| | Sbjct: 1276 cataatccccaacactctctggagtccatggtcctatgaaaaccgagcctgcgttctcaa 1217 Query: 408 tgagctcctcccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacg 467 | || ||||||||| ||| || || || ||||||||||||||||| || || ||||| Sbjct: 1216 tcagtccctcccatttctcagcgtctttgacattgatgatcaaatgttcgggtgcatata 1157 Query: 468 tatttgagaatgataatgcctcaaccatatctc 500 ||||||||| |||| |||||||| |||||||| Sbjct: 1156 gatttgagaaagatattgcctcaatcatatctc 1124
>dbj|AB027709.1| Arabidopsis thaliana AtHDH mRNA for histidinol dehydrogenase, complete cds Length = 1650 Score = 97.6 bits (49), Expect = 3e-17 Identities = 217/273 (79%) Strand = Plus / Minus Query: 228 ttctcagcccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcg 287 ||||||| ||||| || ||||| ||||| ||||| ||| |||| |||||||||| || | Sbjct: 1343 ttctcagaccttcctctgtcaaagattgtacagtcatgaactttaggaaagagtcgagag 1284 Query: 288 acacaccgctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactgg 347 | || || |||||||| || || || ||||| ||||| || || ||||| ||||| || | Sbjct: 1283 agacgccactgtacattcttgcatatccatatgttggaagaacgtggtttgtcccgctcg 1224 Query: 348 cgtagtcgcccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcga 407 | || || || || ||||| || |||||| |||| | |||||| || ||||| ||||| | Sbjct: 1223 cataatccccaacactctctggagtccatggtcctatgaaaaccgagcctgcgttctcaa 1164 Query: 408 tgagctcctcccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacg 467 | || ||||||||| ||| || || || ||||||||||||||||| || || ||||| Sbjct: 1163 tcagtccctcccatttctcagcgtctttgacattgatgatcaaatgttcgggtgcatata 1104 Query: 468 tatttgagaatgataatgcctcaaccatatctc 500 ||||||||| |||| |||||||| |||||||| Sbjct: 1103 gatttgagaaagatattgcctcaatcatatctc 1071
>gb|AF130442.1| Arabidopsis thaliana chromosome V genomic sequence Length = 21845 Score = 81.8 bits (41), Expect = 2e-12 Identities = 206/261 (78%) Strand = Plus / Plus Query: 228 ttctcagcccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcg 287 ||||||| ||||| || ||||| ||||| ||||| ||| |||| |||||||||| || | Sbjct: 16173 ttctcagaccttcctctgtcaaagattgtacagtcatgaactttaggaaagagtcgagag 16232 Query: 288 acacaccgctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactgg 347 | || || |||||||| || || || ||||| ||||| || || ||||| ||||| || | Sbjct: 16233 agacgccactgtacattcttgcatatccatatgttggaagaacgtggtttgtcccgctcg 16292 Query: 348 cgtagtcgcccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcga 407 | || || || || ||||| || |||||| |||| | |||||| || ||||| ||||| | Sbjct: 16293 cataatccccaacactctctggagtccatggtcctatgaaaaccgagcctgcgttctcaa 16352 Query: 408 tgagctcctcccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacg 467 | || ||||||||| ||| || || || ||||||||||||||||| || || ||||| Sbjct: 16353 tcagtccctcccatttctcagcgtctttgacattgatgatcaaatgttcgggtgcatata 16412 Query: 468 tatttgagaatgataatgcct 488 ||||||||| |||| ||||| Sbjct: 16413 gatttgagaaagatattgcct 16433
>dbj|AB007646.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MGI19 Length = 37225 Score = 81.8 bits (41), Expect = 2e-12 Identities = 206/261 (78%) Strand = Plus / Plus Query: 228 ttctcagcccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcg 287 ||||||| ||||| || ||||| ||||| ||||| ||| |||| |||||||||| || | Sbjct: 29055 ttctcagaccttcctctgtcaaagattgtacagtcatgaactttaggaaagagtcgagag 29114 Query: 288 acacaccgctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactgg 347 | || || |||||||| || || || ||||| ||||| || || ||||| ||||| || | Sbjct: 29115 agacgccactgtacattcttgcatatccatatgttggaagaacgtggtttgtcccgctcg 29174 Query: 348 cgtagtcgcccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcga 407 | || || || || ||||| || |||||| |||| | |||||| || ||||| ||||| | Sbjct: 29175 cataatccccaacactctctggagtccatggtcctatgaaaaccgagcctgcgttctcaa 29234 Query: 408 tgagctcctcccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacg 467 | || ||||||||| ||| || || || ||||||||||||||||| || || ||||| Sbjct: 29235 tcagtccctcccatttctcagcgtctttgacattgatgatcaaatgttcgggtgcatata 29294 Query: 468 tatttgagaatgataatgcct 488 ||||||||| |||| ||||| Sbjct: 29295 gatttgagaaagatattgcct 29315
>ref|NM_125783.2| Arabidopsis thaliana unknown protein AT5G63880 mRNA, complete cds Length = 1503 Score = 75.8 bits (38), Expect = 1e-10 Identities = 179/226 (79%) Strand = Plus / Plus Query: 228 ttctcagcccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcg 287 ||||||| ||||| || ||||| ||||| ||||| ||| |||| |||||||||| || | Sbjct: 1261 ttctcagaccttcctctgtcaaagattgtacagtcatgaactttaggaaagagtcgagag 1320 Query: 288 acacaccgctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactgg 347 | || || |||||||| || || || ||||| ||||| || || ||||| ||||| || | Sbjct: 1321 agacgccactgtacattcttgcatatccatatgttggaagaacgtggtttgtcccgctcg 1380 Query: 348 cgtagtcgcccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcga 407 | || || || || ||||| || |||||| |||| | |||||| || ||||| ||||| | Sbjct: 1381 cataatccccaacactctctggagtccatggtcctatgaaaaccgagcctgcgttctcaa 1440 Query: 408 tgagctcctcccattgctcggcttcctttacattgatgatcaaatg 453 | || ||||||||| ||| || || || ||||||||||||||||| Sbjct: 1441 tcagtccctcccatttctcagcgtctttgacattgatgatcaaatg 1486
>gb|M60466.1|BNAHDHQ Spring cabbage histidinol dehydrogenase mRNA, complete cds Length = 1606 Score = 73.8 bits (37), Expect = 5e-10 Identities = 208/265 (78%) Strand = Plus / Minus Query: 236 ccttcttcggtcaaggattgaacagtaatgtacttgaggaaagagttcagcgacacaccg 295 ||||| || |||||||| || ||||| ||| |||| |||||||||| || || || || Sbjct: 1341 ccttcctctgtcaaggactgtacagtcatgaacttcaggaaagagtcgagagagacgcca 1282 Query: 296 ctgtacatcctcgcgtaaccataggttgggaggacatggttcgtcccactggcgtagtcg 355 |||||||| ||||| || || || ||||| || || ||||| ||||| || ||||| || Sbjct: 1281 ctgtacattctcgcatacccgtacgttggaagaacgtggtttgtcccgctcgcgtaatca 1222 Query: 356 cccacgctctcgggggtccattgtcccaggaaaactgaccctgcattctcgatgagctcc 415 || || ||||| || ||||| | || | |||||| || ||||| ||||| || || || Sbjct: 1221 ccaacactctcaggagtccacggccctatgaaaaccgaacctgcgttctctatcagtccc 1162 Query: 416 tcccattgctcggcttcctttacattgatgatcaaatgctcaggagcatacgtatttgag 475 ||||||| ||| || || || |||||||||||||| || ||||| |||||| |||||| Sbjct: 1161 tcccatttctcagcgtctttgacattgatgatcaagtgttcaggtgcatacaggtttgag 1102 Query: 476 aatgataatgcctcaaccatatctc 500 || | || |||||||| |||||||| Sbjct: 1101 aaagttattgcctcaatcatatctc 1077
>gb|AY570535.1| Alyssum lesbiacum histidinol dehydrogenase (HDH) mRNA, partial cds Length = 368 Score = 46.1 bits (23), Expect = 0.11 Identities = 59/71 (83%) Strand = Plus / Minus Query: 437 acattgatgatcaaatgctcaggagcatacgtatttgagaatgataatgcctcaaccata 496 ||||| || ||||||||||| || |||||| ||||||||| || |||||||| |||| Sbjct: 351 acattaattatcaaatgctcgggtgcatacagatttgagaaacttattgcctcaatcata 292 Query: 497 tctctggcaaa 507 ||||| ||||| Sbjct: 291 tctctagcaaa 281
>gb|AC115723.13| Mus musculus chromosome 5, clone RP23-17D18, complete sequence Length = 206470 Score = 44.1 bits (22), Expect = 0.44 Identities = 22/22 (100%) Strand = Plus / Minus Query: 86 tcagatagacaggtacaacaga 107 |||||||||||||||||||||| Sbjct: 96138 tcagatagacaggtacaacaga 96117
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 44.1 bits (22), Expect = 0.44 Identities = 37/42 (88%) Strand = Plus / Minus Query: 310 gtaaccataggttgggaggacatggttcgtcccactggcgta 351 ||||||||||||||| | |||||||| || ||||||||||| Sbjct: 4063531 gtaaccataggttggtaaaacatggttagtaccactggcgta 4063490
>emb|AL021879.3|HS209B9 Human DNA sequence from clone RP1-209B9 on chromosome 20p12 Contains the HAO1 gene for hydroxyacid oxidase (glycolate oxidase) 1, ESTs, STSs and GSSs, complete sequence Length = 98569 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 221 cccagccttctcagcccttct 241 ||||||||||||||||||||| Sbjct: 98285 cccagccttctcagcccttct 98305
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 167 gctcgcttgtgcgcttctagcccttcgac 195 ||||| ||||||||||||||| ||||||| Sbjct: 1706806 gctcgtttgtgcgcttctagctcttcgac 1706778
>gb|AF461423.1| Mus musculus interleukin-23 receptor (IL-23R) mRNA, complete cds Length = 2488 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 gtatttgagaatgataatgcc 487 ||||||||||||||||||||| Sbjct: 1426 gtatttgagaatgataatgcc 1446
>gb|AC159129.4| Mus musculus BAC clone RP23-472N21 from chromosome 6, complete sequence Length = 181390 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 gtatttgagaatgataatgcc 487 ||||||||||||||||||||| Sbjct: 55682 gtatttgagaatgataatgcc 55702
>ref|NM_144548.1| Mus musculus interleukin 23 receptor (Il23r), mRNA Length = 2488 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 467 gtatttgagaatgataatgcc 487 ||||||||||||||||||||| Sbjct: 1426 gtatttgagaatgataatgcc 1446
>gb|AC124758.6| Mus musculus BAC clone RP23-123I10 from chromosome 6, complete sequence Length = 216956 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 467 gtatttgagaatgataatgcc 487 ||||||||||||||||||||| Sbjct: 11541 gtatttgagaatgataatgcc 11521
>gb|AC127309.4| Mus musculus BAC clone RP23-296L9 from 9, complete sequence Length = 188083 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 438 cattgatgatcaaatgctcag 458 ||||||||||||||||||||| Sbjct: 62739 cattgatgatcaaatgctcag 62759
>gb|AC112971.8| Mus musculus chromosome 1, clone RP24-444M12, complete sequence Length = 161310 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 ggcttcctttacattgatga 446 |||||||||||||||||||| Sbjct: 90426 ggcttcctttacattgatga 90407
>gb|AC124694.3| Mus musculus BAC clone RP24-171H8 from chromosome 14, complete sequence Length = 154741 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 61 gaagaaaaatatcagttccc 80 |||||||||||||||||||| Sbjct: 65655 gaagaaaaatatcagttccc 65636
>gb|AC098592.5| Homo sapiens BAC clone RP11-403N12 from 7, complete sequence Length = 190672 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 50 catcccataatgaagaaaaa 69 |||||||||||||||||||| Sbjct: 119677 catcccataatgaagaaaaa 119658
>gb|AC146057.2| Pan troglodytes BAC clone RP43-90E18 from 7, complete sequence Length = 210447 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 catcccataatgaagaaaaa 69 |||||||||||||||||||| Sbjct: 87222 catcccataatgaagaaaaa 87241
>emb|AL163544.24| Human DNA sequence from clone RP11-322A14 on chromosome 13, complete sequence Length = 60286 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 60 tgaagaaaaatatcagttcccaag 83 |||||||| ||||||||||||||| Sbjct: 9790 tgaagaaatatatcagttcccaag 9767
>gb|AC157804.7| Mus musculus chromosome 1, clone RP24-318G19, complete sequence Length = 180563 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 ggcttcctttacattgatga 446 |||||||||||||||||||| Sbjct: 163152 ggcttcctttacattgatga 163133
>dbj|AK020712.1| Mus musculus adult male hypothalamus cDNA, RIKEN full-length enriched library, clone:A230104H11 product:unclassifiable, full insert sequence Length = 1210 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 427 ggcttcctttacattgatga 446 |||||||||||||||||||| Sbjct: 888 ggcttcctttacattgatga 869
>gb|AC018796.4|AC018796 Homo sapiens chromosome 8, clone RP11-51K12, complete sequence Length = 148189 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 atcccataatgaagaaaaatatca 74 |||||||||||| ||||||||||| Sbjct: 9737 atcccataatgaggaaaaatatca 9760
>gb|AF307337.1|AF307337 Homo sapiens ALPP, ALPPL2, ALPI, XCE, CHRND, and CHRNG genes, complete sequence Length = 210301 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 agggacccagccttctcagc 235 |||||||||||||||||||| Sbjct: 98066 agggacccagccttctcagc 98085
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cccaggaaaactgaccctgc 399 |||||||||||||||||||| Sbjct: 19912815 cccaggaaaactgaccctgc 19912834
>gb|AC068134.5| Homo sapiens BAC clone RP11-762N20 from 2, complete sequence Length = 181068 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 agggacccagccttctcagc 235 |||||||||||||||||||| Sbjct: 145282 agggacccagccttctcagc 145301
>gb|AC004993.1|AC004993 Homo sapiens PAC clone RP5-1194E14 from 7p21, complete sequence Length = 161453 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 50 catcccataatgaagaaaaa 69 |||||||||||||||||||| Sbjct: 48941 catcccataatgaagaaaaa 48960
>emb|AM260499.1| Platanus acerifolia partial mRNA for histidinol dehydrogenase (hd gene) Length = 1046 Score = 40.1 bits (20), Expect = 6.9 Identities = 146/188 (77%) Strand = Plus / Minus Query: 311 taaccataggttgggaggacatggttcgtcccactggcgtagtcgcccacgctctcgggg 370 |||||||| ||||| || |||||||| || ||||| || ||||| || || ||||| || Sbjct: 1002 taaccatatgttggaagaacatggtttgttccacttgcatagtctccaacactctctggt 943 Query: 371 gtccattgtcccaggaaaactgaccctgcattctcgatgagctcctcccattgctcggct 430 ||||| || || | || || || ||||||||||| |||| | ||||||| | || || Sbjct: 942 gtccactgccctaaaaacacagaacctgcattctctatgaacccctcccacttttccgca 883 Query: 431 tcctttacattgatgatcaaatgctcaggagcatacgtatttgagaatgataatgcctca 490 || || ||||||| || |||||||| || |||||| ||||| || || | ||||||| Sbjct: 882 tctttaacattgacaattaaatgctcgggtgcatacaagtttgaaaaggagattgcctca 823 Query: 491 accatatc 498 |||||||| Sbjct: 822 accatatc 815
>emb|CT010445.12| Mouse DNA sequence from clone RP23-285G1 on chromosome 17, complete sequence Length = 123987 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 gaaaaatatcagttcccaag 83 |||||||||||||||||||| Sbjct: 122249 gaaaaatatcagttcccaag 122268
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 cccaggaaaactgaccctgc 399 |||||||||||||||||||| Sbjct: 19839029 cccaggaaaactgaccctgc 19839048
>emb|AL731888.5|CNS08C8S Oryza sativa chromosome 12, . BAC OJ1118_C12 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 165433 Score = 40.1 bits (20), Expect = 6.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 cccaggaaaactgaccctgc 399 |||||||||||||||||||| Sbjct: 114445 cccaggaaaactgaccctgc 114426
>emb|AL772278.7| Mouse DNA sequence from clone RP23-416G5 on chromosome 4, complete sequence Length = 199565 Score = 40.1 bits (20), Expect = 6.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 99 tacaacagaccatgttaacagttt 122 ||||||||||| |||||||||||| Sbjct: 159034 tacaacagaccttgttaacagttt 159057 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,920,439 Number of Sequences: 3902068 Number of extensions: 3920439 Number of successful extensions: 74602 Number of sequences better than 10.0: 49 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 74472 Number of HSP's gapped (non-prelim): 128 length of query: 508 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 486 effective length of database: 17,147,199,772 effective search space: 8333539089192 effective search space used: 8333539089192 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)