Clone Name | rbart31d09 |
---|---|
Clone Library Name | barley_pub |
>emb|AJ567371.1|HVU567371 Hordeum vulgare mRNA for putative 3-beta-glucuronosyltransferase (pglcat6 gene), clone 2 Length = 1576 Score = 71.9 bits (36), Expect = 6e-11 Identities = 36/36 (100%) Strand = Plus / Minus Query: 1 acaaatctgtggtattgcattcactgtcaacagctg 36 |||||||||||||||||||||||||||||||||||| Sbjct: 1558 acaaatctgtggtattgcattcactgtcaacagctg 1523
>emb|AJ577570.1|TAE577570 Triticum aestivum partial mRNA for beta3-glucuronyltransferase (pglcat6 gene) Length = 1503 Score = 58.0 bits (29), Expect = 1e-06 Identities = 36/37 (97%), Gaps = 1/37 (2%) Strand = Plus / Minus Query: 1 acaaatctgtggtattgcattcactg-tcaacagctg 36 |||||||||||||||||||||||||| |||||||||| Sbjct: 1486 acaaatctgtggtattgcattcactgttcaacagctg 1450
>gb|AC123529.3| Mus musculus BAC clone RP23-425M11 from chromosome 8, complete sequence Length = 181535 Score = 40.1 bits (20), Expect = 0.23 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tgcattcactgtcaacagct 35 |||||||||||||||||||| Sbjct: 139720 tgcattcactgtcaacagct 139739
>gb|AC116731.9| Mus musculus chromosome 8, clone RP23-346D17, complete sequence Length = 230139 Score = 40.1 bits (20), Expect = 0.23 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tgcattcactgtcaacagct 35 |||||||||||||||||||| Sbjct: 61845 tgcattcactgtcaacagct 61864
>gb|AC138457.3| Mus musculus BAC clone RP23-358E1 from chromosome 19, complete sequence Length = 237854 Score = 36.2 bits (18), Expect = 3.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 13 tattgcattcactgtcaa 30 |||||||||||||||||| Sbjct: 222929 tattgcattcactgtcaa 222946
>gb|AC091763.25| Mus musculus strain C57BL/6J clone rp23-198o2 map 10, complete sequence Length = 221545 Score = 36.2 bits (18), Expect = 3.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 5 atctgtggtattgcattc 22 |||||||||||||||||| Sbjct: 171278 atctgtggtattgcattc 171295
>gb|AC157351.11| Mus musculus chromosome 5, clone RP23-219K16, complete sequence Length = 196331 Score = 36.2 bits (18), Expect = 3.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 aaatctgtggtattgcat 20 |||||||||||||||||| Sbjct: 71434 aaatctgtggtattgcat 71417
>gb|AC155242.2| Mus musculus BAC clone RP24-496G24 from chromosome 17, complete sequence Length = 132408 Score = 36.2 bits (18), Expect = 3.5 Identities = 21/22 (95%) Strand = Plus / Plus Query: 7 ctgtggtattgcattcactgtc 28 ||||||||||| |||||||||| Sbjct: 10645 ctgtggtattgaattcactgtc 10666
>emb|AL929200.8| Zebrafish DNA sequence from clone CH211-190B21, complete sequence Length = 120682 Score = 36.2 bits (18), Expect = 3.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 acaaatctgtggtattgc 18 |||||||||||||||||| Sbjct: 24979 acaaatctgtggtattgc 24962
>emb|AL954698.9| Zebrafish DNA sequence from clone CH211-233B16 in linkage group 6, complete sequence Length = 177161 Score = 36.2 bits (18), Expect = 3.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 acaaatctgtggtattgc 18 |||||||||||||||||| Sbjct: 111737 acaaatctgtggtattgc 111720
>emb|AL928872.7| Zebrafish DNA sequence from clone DKEYP-59A2, complete sequence Length = 200760 Score = 36.2 bits (18), Expect = 3.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 1 acaaatctgtggtattgc 18 |||||||||||||||||| Sbjct: 162896 acaaatctgtggtattgc 162913
>gb|AC151478.1| Mus musculus BAC clone RP23-83K12 from 19, complete sequence Length = 219132 Score = 36.2 bits (18), Expect = 3.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 13 tattgcattcactgtcaa 30 |||||||||||||||||| Sbjct: 140814 tattgcattcactgtcaa 140797 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 242,145 Number of Sequences: 3902068 Number of extensions: 242145 Number of successful extensions: 62991 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62972 Number of HSP's gapped (non-prelim): 19 length of query: 36 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 16 effective length of database: 17,155,003,908 effective search space: 274480062528 effective search space used: 274480062528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)