ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart31d08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GUB2_HORVU (P12257) Lichenase-2 precursor (EC 3.2.1.73) (Lichena... 68 1e-11
2E13F_HORVU (Q02439) Putative glucan endo-1,3-beta-glucosidase GV... 46 4e-05
3E13E_HORVU (Q02438) Glucan endo-1,3-beta-glucosidase GV (EC 3.2.... 41 0.001
4E13B_PEA (Q03467) Glucan endo-1,3-beta-glucosidase precursor (EC... 40 0.003
5GUB_NICPL (P07979) Lichenase precursor (EC 3.2.1.73) (Endo-beta-... 38 0.012
6E13D_HORVU (Q02437) Glucan endo-1,3-beta-glucosidase GIV (EC 3.2... 37 0.020
7E13C_HORVU (Q02126) Glucan endo-1,3-beta-glucosidase GIII precur... 37 0.020
8E13B_PRUPE (P52408) Glucan endo-1,3-beta-glucosidase, basic isof... 37 0.026
9E13H_TOBAC (P36401) Glucan endo-1,3-beta-glucosidase, acidic iso... 37 0.034
10E13A_ARATH (P33157) Glucan endo-1,3-beta-glucosidase, acidic iso... 37 0.034
11E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 ... 36 0.045
12E13B_PHAVU (P23535) Glucan endo-1,3-beta-glucosidase, basic isof... 35 0.077
13E13B_HEVBR (P52407) Glucan endo-1,3-beta-glucosidase, basic vacu... 35 0.13
14E13B_TOBAC (P15797) Glucan endo-1,3-beta-glucosidase, basic vacu... 34 0.17
15E13E_TOBAC (P23546) Glucan endo-1,3-beta-glucosidase, basic vacu... 34 0.17
16E131_SOLTU (P52400) Glucan endo-1,3-beta-glucosidase, basic isof... 33 0.29
17E132_SOLTU (P52401) Glucan endo-1,3-beta-glucosidase, basic isof... 33 0.29
18E133_SOLTU (P52402) Glucan endo-1,3-beta-glucosidase, basic isof... 33 0.29
19E13F_TOBAC (P27666) Glucan endo-1,3-beta-glucosidase, basic vacu... 33 0.29
20E13B_NICPL (P23431) Glucan endo-1,3-beta-glucosidase, basic vacu... 33 0.29
21E13B_MAIZE (P49237) Glucan endo-1,3-beta-glucosidase, acidic iso... 33 0.38
22E13C_TOBAC (P23432) Glucan endo-1,3-beta-glucosidase precursor (... 33 0.38
23E13B_LYCES (Q01413) Glucan endo-1,3-beta-glucosidase B precursor... 33 0.50
24E13D_TOBAC (P23433) Glucan endo-1,3-beta-glucosidase precursor (... 32 0.65
25E13A_SOYBN (Q03773) Glucan endo-1,3-beta-glucosidase precursor (... 31 1.9
26E13A_HORVU (P34742) Glucan endo-1,3-beta-glucosidase GI (EC 3.2.... 30 3.2
27PHK_MYCPA (Q73ZM8) Probable phosphoketolase (EC 4.1.2.-) 30 4.2
28E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 ... 29 5.5
29THT1_SCHPO (Q09684) Nuclear fusion protein tht1 29 5.5
30ENGC1_BACTN (Q8A5I9) Probable GTPase engC protein 1 (EC 3.6.1.-) 29 5.5

>GUB2_HORVU (P12257) Lichenase-2 precursor (EC 3.2.1.73) (Lichenase II)|
           (Endo-beta-1,3-1,4 glucanase II)
           ((1->3,1->4)-beta-glucanase isoenzyme EII) (Fragment)
          Length = 312

 Score = 68.2 bits (165), Expect = 1e-11
 Identities = 28/30 (93%), Positives = 30/30 (100%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MFNENQKD+GVEQNWGLFYPNMQHVYPI+F
Sbjct: 283 MFNENQKDSGVEQNWGLFYPNMQHVYPINF 312



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>E13F_HORVU (Q02439) Putative glucan endo-1,3-beta-glucosidase GVI precursor|
           (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GVI)
           ((1->3)-beta-glucanase isoenzyme GVI)
           (Beta-1,3-endoglucanase GVI) (Fragment)
          Length = 321

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MFNENQK  GVEQN+G+F P+M  VY + F
Sbjct: 287 MFNENQKPEGVEQNFGMFQPDMSQVYHVDF 316



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>E13E_HORVU (Q02438) Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase GV)
           ((1->3)-beta-glucanase isoenzyme GV)
           (Beta-1,3-endoglucanase GV)
          Length = 316

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 19/31 (61%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
 Frame = -2

Query: 476 MFNENQKDNG-VEQNWGLFYPNMQHVYPISF 387
           MFNEN+K    VE+N+GLF+PN Q VYP +F
Sbjct: 284 MFNENRKPGDEVERNFGLFFPNKQPVYPTTF 314



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>E13B_PEA (Q03467) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 370

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+ENQK   +E+++G+FYPN Q  YP  F
Sbjct: 317 MFDENQKSPELEKHFGVFYPNKQKKYPFGF 346



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>GUB_NICPL (P07979) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4|
           glucanase)
          Length = 370

 Score = 38.1 bits (87), Expect = 0.012
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN K+  +E+++GLF PN Q  YP+SF
Sbjct: 317 MFDENNKNPELEKHFGLFSPNKQPKYPLSF 346



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>E13D_HORVU (Q02437) Glucan endo-1,3-beta-glucosidase GIV (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase GIV)
           ((1->3)-beta-glucanase isoenzyme GIV)
           (Beta-1,3-endoglucanase GIV)
          Length = 327

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = -2

Query: 476 MFNENQKDN-GVEQNWGLFYPNMQHVYPISF 387
           MFNENQK     E+++GLFYPN + VY I+F
Sbjct: 278 MFNENQKPGLETERHFGLFYPNKRPVYHINF 308



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>E13C_HORVU (Q02126) Glucan endo-1,3-beta-glucosidase GIII precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase GIII)
           ((1->3)-beta-glucanase isoenzyme GIII)
           (Beta-1,3-endoglucanase GIII)
          Length = 330

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -2

Query: 476 MFNENQKDNG-VEQNWGLFYPNMQHVYPISF 387
           MFNEN KD   +E+N+GLF PNM   Y I+F
Sbjct: 300 MFNENLKDGDELEKNFGLFKPNMSPAYAITF 330



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>E13B_PRUPE (P52408) Glucan endo-1,3-beta-glucosidase, basic isoform precursor|
           (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (PpGns1)
          Length = 350

 Score = 37.0 bits (84), Expect = 0.026
 Identities = 16/30 (53%), Positives = 21/30 (70%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN+K   +E++WGLF P  Q  Y ISF
Sbjct: 320 MFDENRKTPELEKHWGLFSPTKQPKYQISF 349



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>E13H_TOBAC (P36401) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q'|
           precursor (EC 3.2.1.39) ((1->3)-beta-glucan
           endohydrolase) ((1->3)-beta-glucanase)
           (Beta-1,3-endoglucanase) (PR-35)
          Length = 339

 Score = 36.6 bits (83), Expect = 0.034
 Identities = 16/30 (53%), Positives = 23/30 (76%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           +F+E+QKD  +E+++GLF  NMQ  Y ISF
Sbjct: 309 LFDEDQKDPEIEKHFGLFSANMQPKYQISF 338



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>E13A_ARATH (P33157) Glucan endo-1,3-beta-glucosidase, acidic isoform precursor|
           (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Pathogenesis-related protein 2) (PR-2)
           (Beta-1,3-glucanase 2)
          Length = 339

 Score = 36.6 bits (83), Expect = 0.034
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN+K+   E+ WGLF+P+ Q  Y ++F
Sbjct: 309 MFDENKKEPTYEKFWGLFHPDRQSKYEVNF 338



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>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 505

 Score = 36.2 bits (82), Expect = 0.045
 Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = -2

Query: 476 MFNENQKDNGV-EQNWGLFYPNMQHVYPISF**GSS 372
           ++NE+++   V E+NWG+ +PN   VYP+S   GSS
Sbjct: 317 LYNEDKRSGPVSERNWGILFPNGTSVYPLSLSGGSS 352



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>E13B_PHAVU (P23535) Glucan endo-1,3-beta-glucosidase, basic isoform precursor|
           (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 348

 Score = 35.4 bits (80), Expect = 0.077
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+ENQK   +E+++GLF P+ +  YP  F
Sbjct: 286 MFDENQKSPEIEKHFGLFKPSKEKKYPFGF 315



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>E13B_HEVBR (P52407) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform|
           precursor (EC 3.2.1.39) ((1->3)-beta-glucan
           endohydrolase) ((1->3)-beta-glucanase)
           (Beta-1,3-endoglucanase) [Contains: Glucan
           endo-1,3-beta-glucosidase minor form 3; Glucan endo
          Length = 374

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN+K   VE+++GLF+PN    Y ++F
Sbjct: 322 MFDENKKQPEVEKHFGLFFPNKWQKYNLNF 351



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>E13B_TOBAC (P15797) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform|
           precursor (EC 3.2.1.39) ((1->3)-beta-glucan
           endohydrolase) ((1->3)-beta-glucanase)
           (Beta-1,3-endoglucanase, basic)
          Length = 371

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN K+  +E+++GLF PN Q  Y I+F
Sbjct: 319 MFDENNKNPELEKHFGLFSPNKQPKYNINF 348



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>E13E_TOBAC (P23546) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform|
           GGIB50 precursor (EC 3.2.1.39) ((1->3)-beta-glucan
           endohydrolase) ((1->3)-beta-glucanase)
           (Beta-1,3-endoglucanase, basic) (Glucanase GLA)
          Length = 370

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN K+  +E+++GLF PN Q  Y I+F
Sbjct: 318 MFDENNKNPELEKHFGLFSPNKQPKYNINF 347



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>E131_SOLTU (P52400) Glucan endo-1,3-beta-glucosidase, basic isoform 1|
           precursor (EC 3.2.1.39) ((1->3)-beta-glucan
           endohydrolase) ((1->3)-beta-glucanase)
           (Beta-1,3-endoglucanase) (Fragment)
          Length = 337

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN K+  +E+++GLF PN Q  Y ++F
Sbjct: 284 MFDENNKNPELEKHFGLFSPNKQPKYNLNF 313



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>E132_SOLTU (P52401) Glucan endo-1,3-beta-glucosidase, basic isoform 2|
           precursor (EC 3.2.1.39) ((1->3)-beta-glucan
           endohydrolase) ((1->3)-beta-glucanase)
           (Beta-1,3-endoglucanase)
          Length = 363

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN K+  +E+++GLF PN Q  Y ++F
Sbjct: 310 MFDENNKNPELEKHFGLFSPNKQPKYNLNF 339



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>E133_SOLTU (P52402) Glucan endo-1,3-beta-glucosidase, basic isoform 3|
           precursor (EC 3.2.1.39) ((1->3)-beta-glucan
           endohydrolase) ((1->3)-beta-glucanase)
           (Beta-1,3-endoglucanase) (Fragment)
          Length = 328

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN K+  +E+++GLF PN Q  Y ++F
Sbjct: 275 MFDENNKNPELEKHFGLFSPNKQPKYNLNF 304



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>E13F_TOBAC (P27666) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform|
           GLB precursor (EC 3.2.1.39) ((1->3)-beta-glucan
           endohydrolase) ((1->3)-beta-glucanase)
           (Beta-1,3-endoglucanase, basic) (Glucanase GLB)
          Length = 370

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN K+  +E+++GLF PN Q  Y ++F
Sbjct: 318 MFDENNKNPELEKHFGLFSPNKQPKYNLNF 347



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>E13B_NICPL (P23431) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform|
           precursor (EC 3.2.1.39) ((1->3)-beta-glucan
           endohydrolase) ((1->3)-beta-glucanase)
           (Beta-1,3-endoglucanase, basic)
          Length = 365

 Score = 33.5 bits (75), Expect = 0.29
 Identities = 14/30 (46%), Positives = 22/30 (73%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN K+  +E+++GLF PN Q  Y ++F
Sbjct: 318 MFDENNKNPELEKHFGLFSPNKQPKYNLNF 347



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>E13B_MAIZE (P49237) Glucan endo-1,3-beta-glucosidase, acidic isoform precursor|
           (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 335

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -2

Query: 476 MFNENQKDNGV-EQNWGLFYPNMQHVYPISF 387
           MFNE+QK     E+++GLF P+   VYPI+F
Sbjct: 304 MFNEDQKTGAESERHFGLFNPDKSPVYPINF 334



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>E13C_TOBAC (P23432) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 351

 Score = 33.1 bits (74), Expect = 0.38
 Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = -2

Query: 476 MFNENQKDNGV-EQNWGLFYPNMQHVYPISF 387
           MF+EN+K+  V E+++GLFYPN    Y ++F
Sbjct: 316 MFDENEKNGEVTEKHFGLFYPNRTAKYQLNF 346



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>E13B_LYCES (Q01413) Glucan endo-1,3-beta-glucosidase B precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase B)
           ((1->3)-beta-glucanase B) (Basic beta-1,3-glucanase)
           (Beta-1,3-endoglucanase B)
          Length = 360

 Score = 32.7 bits (73), Expect = 0.50
 Identities = 13/30 (43%), Positives = 22/30 (73%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYPNMQHVYPISF 387
           MF+EN K+  +E+++G+F PN Q  Y ++F
Sbjct: 310 MFDENNKNPELEKHFGMFSPNKQPKYNLNF 339



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>E13D_TOBAC (P23433) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 351

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
 Frame = -2

Query: 476 MFNENQKDNGV-EQNWGLFYPNMQHVYPISF 387
           MF+EN+K   + E+++GLFYPN    Y ++F
Sbjct: 316 MFDENEKQGEITEKHFGLFYPNRAAKYQLNF 346



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>E13A_SOYBN (Q03773) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
          Length = 347

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/31 (51%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 476 MFNENQKDNGVEQNWGLFYP-NMQHVYPISF 387
           MF+ENQK    E+ WGLF P   Q  Y I+F
Sbjct: 316 MFDENQKQPEFEKFWGLFSPITKQPKYSINF 346



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>E13A_HORVU (P34742) Glucan endo-1,3-beta-glucosidase GI (EC 3.2.1.39)|
           ((1->3)-beta-glucan endohydrolase GI)
           ((1->3)-beta-glucanase isoenzyme GI)
           (Beta-1,3-endoglucanase GI)
          Length = 310

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -2

Query: 476 MFNENQKDNGV-EQNWGLFYPNMQHVYPISF 387
           MFNEN K   + E+++GLF P+    YPI F
Sbjct: 279 MFNENFKTGELTEKHFGLFNPDKSPAYPIRF 309



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>PHK_MYCPA (Q73ZM8) Probable phosphoketolase (EC 4.1.2.-)|
          Length = 804

 Score = 29.6 bits (65), Expect = 4.2
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 308 AHIMYCT-GLGLGTWDATAEAAQMRTRVVVACYTSVP 201
           A I +CT GLG+  W +TA +      VV+AC   +P
Sbjct: 602 AAIAHCTRGLGIWDWASTARSIGAEPDVVLACAGDIP 638



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>E133_ARATH (Q9ZU91) Putative glucan endo-1,3-beta-glucosidase 3 precursor (EC|
           3.2.1.39) ((1->3)-beta-glucan endohydrolase)
           ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase)
           (Beta-1,3-glucanase)
          Length = 501

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 13/29 (44%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = -2

Query: 476 MFNENQKDNGV-EQNWGLFYPNMQHVYPI 393
           ++NE+ +   V E+NWGLFY N   VY +
Sbjct: 314 LYNEDTRPGPVSEKNWGLFYTNGTPVYTL 342



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>THT1_SCHPO (Q09684) Nuclear fusion protein tht1|
          Length = 577

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 153 RGSVCICFPSIENHTYWYTSIASHYYSRTHLSCLS 257
           RGS   C   +E+ + W+ S  SH++   HL  L+
Sbjct: 114 RGSQSECVSKLESTSTWWLSFTSHFHDVNHLCRLA 148



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>ENGC1_BACTN (Q8A5I9) Probable GTPase engC protein 1 (EC 3.6.1.-)|
          Length = 310

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 15/46 (32%), Positives = 26/46 (56%)
 Frame = -2

Query: 206 VPVRMIFDGREAYANAPPSSIDHALDTYTHVCVPRNYIVGFKISSK 69
           VPV+++F+  +AY       +D  ++ YTH+  P      FK+S+K
Sbjct: 119 VPVKLVFNKVDAYNEDELRYLDALINLYTHIGYP-----CFKVSAK 159


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,201,283
Number of Sequences: 219361
Number of extensions: 1239273
Number of successful extensions: 2678
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2678
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3188886965
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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